deepvariant-r1.6.1 / Git / Commit [9b26b7]

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deepvariant-r1.6.1

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Initial commit

Authored by: cathy-stones 2024-08-08

Browse code at this revision

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added	deepvariant/testdata/input/cohort-chr20_100k.vcf.gz.tbi
added	deepvariant/testdata/input/cohort-chr20_and_chr21_100k.vcf.gz
added	deepvariant/testdata/input/cohort-chr20_and_chr21_100k.vcf.gz.tbi
added	deepvariant/testdata/input/cohort-chr21_100k.vcf.gz
added	deepvariant/testdata/input/cohort-chr21_100k.vcf.gz.tbi
added	deepvariant/testdata/input/grch38.chr20_and_21_10M.fa.gz
added	deepvariant/testdata/input/grch38.chr20_and_21_10M.fa.gz.fai
added	deepvariant/testdata/input/grch38.chr20_and_21_10M.fa.gz.gzi
added	deepvariant/testdata/input/grch38_1k_subset_chr20_and_chr21.bam
added	deepvariant/testdata/input/grch38_1k_subset_chr20_and_chr21.bam.bai
added	deepvariant/testdata/input/haplotypes.pbtxt
added	deepvariant/testdata/input/hs37d5_chr20_1_1000000.fa.gz
added	deepvariant/testdata/input/hs37d5_chr20_1_1000000.fa.gz.fai
added	deepvariant/testdata/input/hs37d5_chr20_1_1000000.fa.gz.gzi
added	deepvariant/testdata/input/make_examples_runtime-00000-of-00002.tsv
added	deepvariant/testdata/input/make_examples_runtime-00001-of-00002.tsv
added	deepvariant/testdata/input/make_examples_runtime.tsv
added	deepvariant/testdata/input/reads.pbtxt
added	deepvariant/testdata/input/realigned_reads.pbtxt
added	deepvariant/testdata/input/reference.pbtxt
added	deepvariant/testdata/input/test_calls_from_vcf.vcf.gz
added	deepvariant/testdata/input/test_calls_from_vcf.vcf.gz.tbi
added	deepvariant/testdata/input/test_nist.b37_chr20_100kbp_at_10mb.bed
added	deepvariant/testdata/input/test_nist.b37_chr20_100kbp_at_10mb.vcf.gz
added	deepvariant/testdata/input/test_nist.b37_chr20_100kbp_at_10mb.vcf.gz.tbi