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Catherine Stones
cathy-stones/
deepvariant-r1.6.1
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[9b26b7]: / deepvariant / testdata / input / make_examples_runtime-00001-of-00002.tsv

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# region get reads find candidates make pileup images write outputs num reads num candidates num examples
1 chr1:1001-2000 0.016 0.018 0.001 0.0 0 0 0
2 chr1:65001-66000 0.031 0.047 0.0 0.001 22 0 0
3 chr1:129001-130000 0.056 0.052 0.208 0.03 57 6 6
4 chr1:193001-194000 0.055 0.058 0.493 0.163 52 27 27
5 chr1:257001-258000 0.04 0.033 0.079 0.048 13 12 12
6 chr1:321001-322000 0.045 0.014 0.0 0.0 0 0 0
7 chr1:385001-386000 0.018 0.037 0.0 0.0 0 0 0
8 chr1:449001-450000 0.018 0.035 0.0 0.0 0 0 0
9 chr1:513001-514000 0.033 0.048 0.021 0.011 39 2 2
10 chr1:577001-578000 0.008 0.02 0.0 0.0 0 0 0
11 chr1:641001-642000 0.023 0.048 0.026 0.005 26 1 1
12 chr1:705001-706000 0.02 0.054 0.012 0.004 37 1 1
13 chr1:769001-770000 0.044 0.044 0.0 0.0 41 0 0
14 chr1:833001-834000 0.034 0.05 0.0 0.0 38 0 0
15 chr1:897001-898000 0.031 0.053 0.126 0.033 32 7 7
16 chr1:961001-962000 0.024 0.05 0.015 0.01 22 2 2
17 chr1:1025001-1026000 0.025 0.054 0.009 0.006 26 1 1
18 chr1:1089001-1090000 0.022 0.047 0.009 0.005 29 1 1
19 chr1:1153001-1154000 0.02 0.051 0.038 0.009 26 2 2
20 chr1:1217001-1218000 0.022 0.05 0.0 0.0 20 0 0
21 chr1:1281001-1282000 0.012 0.058 0.0 0.0 21 0 0
22 chr1:1345001-1346000 0.023 0.049 0.015 0.01 22 2 2
23 chr1:1409001-1410000 0.047 0.047 0.045 0.004 41 1 1
24 chr1:1473001-1474000 0.03 0.053 0.082 0.01 38 2 2
25 chr1:1537001-1538000 0.024 0.044 0.038 0.005 32 1 1
26 chr1:1601001-1602000 0.014 0.06 0.153 0.035 16 7 7
27 chr1:1665001-1666000 0.031 0.046 0.02 0.01 32 2 2
28 chr1:1729001-1730000 0.022 0.049 0.098 0.036 30 7 7
29 chr1:1793001-1794000 0.029 0.052 0.062 0.01 36 2 2
30 chr1:1857001-1858000 0.018 0.05 0.0 0.0 32 0 0
31 chr1:1921001-1922000 0.026 0.051 0.05 0.021 15 4 4
32 chr1:1985001-1986000 0.012 0.05 0.022 0.004 22 1 1
33 chr1:2049001-2050000 0.024 0.056 0.03 0.005 24 1 1
34 chr1:2113001-2114000 0.021 0.049 0.0 0.0 27 0 0
35 chr1:2177001-2178000 0.029 0.049 0.0 0.0 21 0 0
36 chr1:2241001-2242000 0.024 0.05 0.099 0.026 31 5 5
37 chr1:2305001-2306000 0.016 0.046 0.017 0.009 28 2 2
38 chr1:2369001-2370000 0.02 0.046 0.13 0.023 30 5 5
39 chr1:2433001-2434000 0.022 0.048 0.023 0.005 18 1 1
40 chr1:2497001-2498000 0.017 0.047 0.009 0.005 26 1 1
41 chr1:2561001-2562000 0.027 0.048 0.0 0.0 28 0 0
42 chr1:2625001-2626000 0.02 0.048 0.077 0.027 35 4 4
43 chr1:2689001-2690000 0.108 0.206 12.719 1.944 75 229 257
44 chr1:2753001-2754000 0.043 0.103 2.33 0.866 18 189 207
45 chr1:2817001-2818000 0.047 0.049 0.0 0.0 35 0 0
46 chr1:2881001-2882000 0.019 0.049 0.0 0.0 28 0 0
47 chr1:2945001-2946000 0.038 0.049 0.052 0.025 31 6 6
48 chr1:3009001-3010000 0.067 0.042 0.0 0.0 30 0 0
49 chr1:3073001-3074000 0.028 0.057 0.058 0.01 23 2 2
50 chr1:3137001-3138000 0.023 0.048 0.0 0.0 16 0 0
51 chr1:3201001-3202000 0.018 0.055 0.079 0.021 24 4 4
52 chr1:3265001-3266000 0.029 0.056 0.0 0.001 17 0 0
53 chr1:3329001-3330000 0.02 0.042 0.0 0.0 35 0 0
54 chr1:3393001-3394000 0.031 0.052 0.0 0.0 25 0 0
55 chr1:3457001-3458000 0.021 0.049 0.03 0.022 17 5 5
56 chr1:3521001-3522000 0.018 0.051 0.063 0.015 20 3 3
57 chr1:3585001-3586000 0.016 0.049 0.01 0.008 14 2 2
58 chr1:3649001-3650000 0.039 0.047 0.0 0.0 33 0 0
59 chr1:3713001-3714000 0.022 0.047 0.013 0.008 18 2 2
60 chr1:3777001-3778000 0.025 0.051 0.007 0.006 21 1 1
61 chr1:3841001-3842000 0.034 0.049 0.023 0.009 40 2 2
62 chr1:3905001-3906000 0.059 0.044 0.071 0.014 29 1 3
63 chr1:3969001-3970000 0.025 0.044 0.028 0.013 32 3 3
64 chr1:4033001-4034000 0.02 0.045 0.145 0.051 35 9 11
65 chr1:4097001-4098000 0.022 0.043 0.026 0.014 28 3 3
66 chr1:4161001-4162000 0.025 0.057 0.063 0.023 18 5 5
67 chr1:4225001-4226000 0.029 0.044 0.068 0.015 40 3 3
68 chr1:4289001-4290000 0.047 0.043 0.0 0.0 44 0 0
69 chr1:4353001-4354000 0.02 0.049 0.1 0.032 26 5 7
70 chr1:4417001-4418000 0.052 0.051 0.069 0.031 39 6 6
71 chr1:4481001-4482000 0.025 0.046 0.023 0.012 41 2 2
72 chr1:4545001-4546000 0.033 0.047 0.023 0.01 42 2 2
73 chr1:4609001-4610000 0.032 0.049 0.037 0.005 34 1 1
74 chr1:4673001-4674000 0.022 0.049 0.042 0.021 36 4 4
75 chr1:4737001-4738000 0.017 0.049 0.017 0.009 29 2 2
76 chr1:4801001-4802000 0.041 0.046 0.019 0.009 31 2 2
77 chr1:4865001-4866000 0.025 0.047 0.0 0.0 37 0 0
78 chr1:4929001-4930000 0.033 0.047 0.015 0.005 48 1 1
79 chr1:4993001-4994000 0.033 0.051 0.065 0.011 52 2 2
80 chr1:5057001-5058000 0.028 0.046 0.0 0.0 45 0 0
81 chr1:5121001-5122000 0.018 0.045 0.015 0.011 28 2 2
82 chr1:5185001-5186000 0.049 0.041 0.038 0.004 34 1 1
83 chr1:5249001-5250000 0.022 0.046 0.152 0.037 33 3 8
84 chr1:5313001-5314000 0.025 0.047 0.0 0.0 38 0 0
85 chr1:5377001-5378000 0.014 0.051 0.009 0.006 27 1 1
86 chr1:5441001-5442000 0.032 0.052 0.0 0.0 34 0 0
87 chr1:5505001-5506000 0.035 0.054 0.011 0.006 41 1 1
88 chr1:5569001-5570000 0.032 0.054 0.048 0.005 49 1 1
89 chr1:5633001-5634000 0.036 0.045 0.023 0.009 38 2 2
90 chr1:5697001-5698000 0.026 0.047 0.114 0.023 38 3 5
91 chr1:5761001-5762000 0.04 0.043 0.034 0.005 31 1 1
92 chr1:5825001-5826000 0.022 0.047 0.087 0.031 36 6 6
93 chr1:5889001-5890000 0.029 0.048 0.025 0.02 15 2 2
94 chr1:5953001-5954000 0.031 0.044 0.0 0.0 40 0 0
95 chr1:6017001-6018000 0.018 0.046 0.156 0.036 35 5 7
96 chr1:6081001-6082000 0.024 0.043 0.016 0.01 28 2 2
97 chr1:6145001-6146000 0.016 0.049 0.063 0.011 28 2 2
98 chr1:6209001-6210000 0.037 0.046 0.021 0.01 37 2 2
99 chr1:6273001-6274000 0.06 0.048 0.023 0.005 22 1 1
100 chr1:6337001-6338000 0.031 0.045 0.133 0.035 32 2 7