Commit [9b26b7] main

Initial commit

cathy-stones cathy-stones 2024-08-08

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added deepvariant/testdata/golden.training_examples.vcf
added deepvariant/testdata/golden.vcf_candidate_importer.training_examples.tfrecord.gz
added deepvariant/testdata/golden.vcf_candidate_importer.training_examples.tfrecord.gz.example_info.json
added deepvariant/testdata/golden.vcf_candidate_importer_calling_examples.tfrecord
added deepvariant/testdata/golden.vcf_candidate_importer_calling_examples.tfrecord.example_info.json
added deepvariant/testdata/golden.vcf_candidate_importer_calling_examples.tfrecord.gz.example_info.json
added deepvariant/testdata/golden.vcf_candidate_importer_postprocess_single_site_input-00000-of-00001.tfrecord.gz
added deepvariant/testdata/golden.vcf_candidate_importer_postprocess_single_site_output.vcf
added deepvariant/testdata/input/HG002.hifi.hg37.phased.chr20.1_1000000.bam
added deepvariant/testdata/input/HG002.hifi.hg37.phased.chr20.1_1000000.bam.bai
added deepvariant/testdata/input/HG002_GRCh37_chr20_1_1000000_svs.vcf.gz
added deepvariant/testdata/input/HG002_GRCh37_chr20_1_1000000_svs.vcf.gz.tbi
added deepvariant/testdata/input/HG002_NIST_150bp_downsampled_30x.chr20.10_10p1mb.bam
added deepvariant/testdata/input/HG002_NIST_150bp_downsampled_30x.chr20.10_10p1mb.bam.bai
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.bam
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.bam.bai
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.cram
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.cram.crai
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.first_half.bam
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.first_half.bam.bai
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.second_half.bam
added deepvariant/testdata/input/NA12878_S1.chr20.10_10p1mb.second_half.bam.bai
added deepvariant/testdata/input/allele_frequencies_vcf.vcf.gz
added deepvariant/testdata/input/allele_frequencies_vcf.vcf.gz.tbi
added deepvariant/testdata/input/cohort-chr20_100k.vcf.gz
deepvariant/testdata/golden.training_examples.vcf Diff Switch to side-by-side view
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deepvariant/testdata/golden.vcf_candidate_importer.training_examples.tfrecord.gz.example_info.json Diff Switch to side-by-side view
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deepvariant/testdata/golden.vcf_candidate_importer_calling_examples.tfrecord.example_info.json Diff Switch to side-by-side view
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deepvariant/testdata/golden.vcf_candidate_importer_calling_examples.tfrecord.gz.example_info.json Diff Switch to side-by-side view
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deepvariant/testdata/golden.vcf_candidate_importer_postprocess_single_site_output.vcf Diff Switch to side-by-side view
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