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Commit [d7cf27]

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [1f4d88]

Child: [2108ce]

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added	src/examples/classify_bedregions_w_kerassequence.py
added	src/examples/classify_bedregions_w_reducedim.py
added	src/examples/classify_bedregions_w_view.py
added	src/examples/classify_fasta.py
added	src/examples/classify_nucleotide_sequences.ipynb
added	src/examples/example_input_importance.py
added	src/examples/hyperparameter_optimization_w_janggu.ipynb
added	src/examples/janggu_convnet_examples.ipynb
added	src/examples/janggu_convnet_examples_with_hdf5.ipynb
added	src/examples/janggu_convnet_examples_with_view.ipynb
added	src/examples/keras_convnet_example.ipynb
added	src/examples/keras_convnet_example_w_sequence.ipynb
added	src/examples/plot_coverage.ipynb
added	src/examples/plot_coverage.py
added	src/examples/pytorch_convnet_example.ipynb
added	src/examples/sklearn_example_with_kmers.ipynb
added	src/examples/variant_effect_prediction-part2.ipynb
added	src/examples/variant_effect_prediction.ipynb
added	src/janggu/__init__.py
added	src/janggu/__main__.py
added	src/janggu/cli.py
added	src/janggu/data/__init__.py
added	src/janggu/data/coverage.py
added	src/janggu/data/data.py
added	src/janggu/data/dna.py

src/examples/classify_bedregions_w_kerassequence.py Diff Switch to side-by-side view

src/examples/classify_bedregions_w_reducedim.py Diff Switch to side-by-side view

src/examples/classify_bedregions_w_view.py Diff Switch to side-by-side view

src/examples/classify_fasta.py Diff Switch to side-by-side view

src/examples/classify_nucleotide_sequences.ipynb Diff Switch to side-by-side view

src/examples/example_input_importance.py Diff Switch to side-by-side view

src/examples/hyperparameter_optimization_w_janggu.ipynb Diff Switch to side-by-side view

src/examples/janggu_convnet_examples.ipynb Diff Switch to side-by-side view

src/examples/janggu_convnet_examples_with_hdf5.ipynb Diff Switch to side-by-side view

src/examples/janggu_convnet_examples_with_view.ipynb Diff Switch to side-by-side view

src/examples/keras_convnet_example.ipynb Diff Switch to side-by-side view

src/examples/keras_convnet_example_w_sequence.ipynb Diff Switch to side-by-side view

src/examples/plot_coverage.ipynb Diff Switch to side-by-side view

src/examples/plot_coverage.py Diff Switch to side-by-side view

src/examples/pytorch_convnet_example.ipynb Diff Switch to side-by-side view

src/examples/sklearn_example_with_kmers.ipynb Diff Switch to side-by-side view

src/examples/variant_effect_prediction-part2.ipynb Diff Switch to side-by-side view

src/examples/variant_effect_prediction.ipynb Diff Switch to side-by-side view

src/janggu/init.py Diff Switch to side-by-side view

src/janggu/main.py Diff Switch to side-by-side view

src/janggu/cli.py Diff Switch to side-by-side view

src/janggu/data/init.py Diff Switch to side-by-side view

src/janggu/data/coverage.py Diff Switch to side-by-side view

src/janggu/data/data.py Diff Switch to side-by-side view

src/janggu/data/dna.py Diff Switch to side-by-side view

<< < 1 2 3 4 5 6 > >> (Page 3 of 6)