janggu / Git / Commit [d7cf27]

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Commit [d7cf27]

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [1f4d88]

Child: [2108ce]

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added	src/janggu/data/genomic_indexer.py
added	src/janggu/data/genomicarray.py
added	src/janggu/data/nparr.py
added	src/janggu/data/visualization.py
added	src/janggu/decorators.py
added	src/janggu/evaluation.py
added	src/janggu/janggutrim.py
added	src/janggu/layers.py
added	src/janggu/losses.py
added	src/janggu/model.py
added	src/janggu/resources/10regions.bed
added	src/janggu/resources/bed_test.bed
added	src/janggu/resources/positive.bed
added	src/janggu/resources/positive.bedgraph
added	src/janggu/resources/positive_gap.bed
added	src/janggu/resources/positive_shift.bed
added	src/janggu/resources/pseudo_genome.fa
added	src/janggu/resources/pseudo_snps.vcf
added	src/janggu/resources/region_w_strand.bed
added	src/janggu/resources/roi.bed
added	src/janggu/resources/roi_test.bed
added	src/janggu/resources/roi_train.bed
added	src/janggu/resources/sacCer3.chrom.sizes
added	src/janggu/resources/sample.bam
added	src/janggu/resources/sample.bam.bai

src/janggu/data/genomic_indexer.py Diff Switch to side-by-side view

src/janggu/data/genomicarray.py Diff Switch to side-by-side view

src/janggu/data/nparr.py Diff Switch to side-by-side view

src/janggu/data/visualization.py Diff Switch to side-by-side view

src/janggu/decorators.py Diff Switch to side-by-side view

src/janggu/evaluation.py Diff Switch to side-by-side view

src/janggu/janggutrim.py Diff Switch to side-by-side view

src/janggu/layers.py Diff Switch to side-by-side view

src/janggu/losses.py Diff Switch to side-by-side view

src/janggu/model.py Diff Switch to side-by-side view

src/janggu/resources/10regions.bed Diff Switch to side-by-side view

src/janggu/resources/bed_test.bed Diff Switch to side-by-side view

src/janggu/resources/positive.bed Diff Switch to side-by-side view

src/janggu/resources/positive.bedgraph Diff Switch to side-by-side view

src/janggu/resources/positive_gap.bed Diff Switch to side-by-side view

src/janggu/resources/positive_shift.bed Diff Switch to side-by-side view

src/janggu/resources/pseudo_genome.fa Diff Switch to side-by-side view

src/janggu/resources/pseudo_snps.vcf Diff Switch to side-by-side view

src/janggu/resources/region_w_strand.bed Diff Switch to side-by-side view

src/janggu/resources/roi.bed Diff Switch to side-by-side view

src/janggu/resources/roi_test.bed Diff Switch to side-by-side view

src/janggu/resources/roi_train.bed Diff Switch to side-by-side view

src/janggu/resources/sacCer3.chrom.sizes Diff Switch to side-by-side view

src/janggu/resources/sample.bam

Binary file was added.

src/janggu/resources/sample.bam.bai

Binary file was added.

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