--- a +++ b/processing/MACCROBAT/28202862.ann @@ -0,0 +1,242 @@ +T1 Age 2 13 40-year-old +T2 Sex 14 19 woman +T3 Clinical_event 20 27 visited +E1 Clinical_event:T3 +T4 Nonbiological_location 32 71 Department of Obstetrics and Gynecology +T5 Nonbiological_location 75 87 our hospital +R1 MODIFY Arg1:T5 Arg2:T4 +R2 MODIFY Arg1:T4 Arg2:E1 +T6 Sign_symptom 121 128 dyspnea +E2 Sign_symptom:T6 +T7 Detailed_description 129 138 on effort +R3 MODIFY Arg1:T7 Arg2:E2 +T8 Detailed_description 114 120 sudden +R4 MODIFY Arg1:T8 Arg2:E2 +T9 History 174 187 endometriosis +T10 Disease_disorder 174 187 endometriosis +E3 Disease_disorder:T10 +T11 Medication 222 235 contraceptive +E4 Medication:T11 +T12 Detailed_description 205 216 combination +R5 MODIFY Arg1:T12 Arg2:E4 +T13 Administration 217 221 oral +T14 Administration 236 240 pill +R6 MODIFY Arg1:T13 Arg2:E4 +R7 MODIFY Arg1:T14 Arg2:E4 +T15 Medication 255 279 ethinylestradiol betadex +E5 Medication:T15 +T16 Medication 242 254 drospirenone +E6 Medication:T16 +R8 SUB_PROCEDURE Arg1:E5 Arg2:E4 +R9 SUB_PROCEDURE Arg1:E6 Arg2:E4 +T17 Detailed_description 281 297 trade name; Yaz™ +T18 Detailed_description 299 325 Bayer, Leverkusen, Germany +R10 MODIFY Arg1:T17 Arg2:E4 +R11 MODIFY Arg1:T18 Arg2:E4 +T19 Date 393 403 April 2016 +E7 Date:T19 +T20 Nonbiological_location 429 436 vehicle +T21 Duration 415 423 7 nights +E8 Duration:T21 +T22 Activity 409 414 spent +E9 Activity:T22 +#1 AnnotatorNotes E9 specifically, she lived and slept there +T23 Sign_symptom 457 464 dyspnea +E10 Sign_symptom:T23 +T24 Detailed_description 465 474 on effort +R12 MODIFY Arg1:T24 Arg2:E10 +T25 Detailed_description 450 456 sudden +R13 MODIFY Arg1:T25 Arg2:E10 +T26 Other_event 342 362 Kumamoto Earthquakes +E11 Other_event:T26 +#2 AnnotatorNotes E11 natural disaster +T27 Other_event 378 389 aftershocks +E12 Other_event:T27 +#3 AnnotatorNotes E12 natural disaster +T28 Clinical_event 484 490 walked +E13 Clinical_event:T28 +T29 Nonbiological_location 491 498 outside +T30 Date 514 531 8th morning after +E14 Date:T30 +T31 Other_event 536 552 first earthquake +E15 Other_event:T31 +#4 AnnotatorNotes E15 natural disaster +T32 Activity 567 580 walked around +E16 Activity:T32 +T33 Disease_disorder 798 818 Deep vein thrombosis +E17 Disease_disorder:T33 +A1 POLARITY E17 UNCERTAIN +T34 Disease_disorder 820 823 DVT +E18 Disease_disorder:T34 +R14 IDENTICAL Arg1:E18 Arg2:E17 +T35 Sign_symptom 705 713 swelling +E19 Sign_symptom:T35 +T36 Sign_symptom 718 722 pain +E20 Sign_symptom:T36 +T37 Biological_structure 730 750 left lower extremity +R15 MODIFY Arg1:T37 Arg2:E20 +R16 MODIFY Arg1:T37 Arg2:E19 +T38 Diagnostic_procedure 760 773 serum D-dimer +E21 Diagnostic_procedure:T38 +T39 Lab_value 786 796 13.2 μg/mL +R17 MODIFY Arg1:T39 Arg2:E21 +T40 Diagnostic_procedure 879 898 computed tomography +E22 Diagnostic_procedure:T40 +T41 Diagnostic_procedure 900 902 CT +E23 Diagnostic_procedure:T41 +R18 IDENTICAL Arg1:E23 Arg2:E22 +T42 Activity 626 638 spent nights +E24 Activity:T42 +T43 Nonbiological_location 646 655 small car +R19 MODIFY Arg1:T43 Arg2:E24 +T44 Biological_structure 665 669 legs +T45 Detailed_description 675 691 hanging position +R20 MODIFY Arg1:T45 Arg2:T44 +R21 MODIFY Arg1:T44 Arg2:E24 +T46 Diagnostic_procedure 1545 1560 body mass index +E25 Diagnostic_procedure:T46 +T47 Lab_value 1565 1575 24.4 kg/m2 +R22 MODIFY Arg1:T47 Arg2:E25 +T48 Diagnostic_procedure 1483 1500 oxygen saturation +E26 Diagnostic_procedure:T48 +T49 Diagnostic_procedure 1502 1506 SaO2 +E27 Diagnostic_procedure:T49 +R23 IDENTICAL Arg1:E27 Arg2:E26 +T50 Detailed_description 1511 1529 arterial blood gas +R24 MODIFY Arg1:T50 Arg2:E26 +T51 Lab_value 1534 1539 97.7% +R25 MODIFY Arg1:T51 Arg2:E26 +T52 Clinical_event 1379 1388 admission +E28 Clinical_event:T52 +T53 Diagnostic_procedure 1394 1408 blood pressure +E29 Diagnostic_procedure:T53 +T54 Lab_value 1413 1424 129/80 mmHg +R26 MODIFY Arg1:T54 Arg2:E29 +T55 Diagnostic_procedure 1433 1443 heart rate +E30 Diagnostic_procedure:T55 +T56 Lab_value 1448 1467 72 beats per minute +R27 MODIFY Arg1:T56 Arg2:E30 +T57 Disease_disorder 1340 1343 PTE +E31 Disease_disorder:T57 +#5 AnnotatorNotes E31 pulmonary thromboembolism +T58 Sign_symptom 920 936 contrast deficit +E32 Sign_symptom:T58 +T59 Detailed_description 861 878 contrast-enhanced +R28 MODIFY Arg1:T59 Arg2:E22 +T60 Biological_structure 944 970 bilateral pulmonary artery +R29 MODIFY Arg1:T60 Arg2:E32 +T61 Biological_structure 991 1011 left lower extremity +R30 MODIFY Arg1:T61 Arg2:E32 +T62 Detailed_description 1013 1060 posterior tibial, soleus and gastrocnemius vein +R31 MODIFY Arg1:T62 Arg2:E32 +T63 Diagnostic_procedure 1076 1102 right ventricular function +E33 Diagnostic_procedure:T63 +T64 Lab_value 1107 1113 intact +R32 MODIFY Arg1:T64 Arg2:E33 +T65 Diagnostic_procedure 1125 1150 pulmonary artery pressure +E34 Diagnostic_procedure:T65 +T66 Lab_value 1151 1160 29/8 mmHg +R33 MODIFY Arg1:T66 Arg2:E34 +T67 Diagnostic_procedure 1172 1182 ultrasound +E35 Diagnostic_procedure:T67 +T68 Biological_structure 1164 1171 cardiac +R34 MODIFY Arg1:T68 Arg2:E35 +T69 Diagnostic_procedure 1196 1221 brain natriuretic peptide +E36 Diagnostic_procedure:T69 +T70 Detailed_description 1189 1195 plasma +R35 MODIFY Arg1:T70 Arg2:E36 +T71 Diagnostic_procedure 1237 1261 troponin T concentration +E37 Diagnostic_procedure:T71 +T72 Detailed_description 1226 1236 high-sense +R36 MODIFY Arg1:T72 Arg2:E37 +T73 Lab_value 1274 1284 97.2 pg/mL +R37 MODIFY Arg1:T73 Arg2:E36 +T74 Lab_value 1289 1301 0.0061 ng/mL +R38 MODIFY Arg1:T74 Arg2:E37 +T75 Clinical_event 1348 1356 admitted +E38 Clinical_event:T75 +T76 Nonbiological_location 1364 1374 department +R39 MODIFY Arg1:T76 Arg2:E38 +T77 Diagnostic_procedure 1577 1596 Electrocardiography +E39 Diagnostic_procedure:T77 +T78 Diagnostic_procedure 1609 1619 ultrasound +E40 Diagnostic_procedure:T78 +T79 Biological_structure 1601 1608 cardiac +R40 MODIFY Arg1:T79 Arg2:E40 +T80 Disease_disorder 1637 1650 heart failure +E41 Disease_disorder:T80 +A2 POLARITY E41 NEG +T81 Diagnostic_procedure 1677 1714 factors related to thrombus formation +E42 Diagnostic_procedure:T81 +T82 Diagnostic_procedure 1726 1735 protein C +E43 Diagnostic_procedure:T82 +T83 Diagnostic_procedure 1737 1746 protein S +E44 Diagnostic_procedure:T83 +T84 Diagnostic_procedure 1748 1760 antithrombin +E45 Diagnostic_procedure:T84 +T85 Diagnostic_procedure 1766 1793 antiphospholipid antibodies +E46 Diagnostic_procedure:T85 +T86 Lab_value 1831 1837 normal +R41 MODIFY Arg1:T86 Arg2:E42 +R42 SUB_PROCEDURE Arg1:E43 Arg2:E42 +R43 SUB_PROCEDURE Arg1:E44 Arg2:E42 +R44 SUB_PROCEDURE Arg1:E45 Arg2:E42 +R45 SUB_PROCEDURE Arg1:E46 Arg2:E42 +T87 Medication 1871 1884 contraceptive +E47 Medication:T87 +A3 POLARITY E47 NEG +T88 Administration 1866 1870 oral +R46 MODIFY Arg1:T88 Arg2:E47 +T89 Medication 1911 1922 rivaroxaban +E48 Medication:T89 +T90 Dosage 1924 1936 30 mg, daily +R47 MODIFY Arg1:T90 Arg2:E48 +T91 Medication 1953 1966 anticoagulant +E49 Medication:T91 +R48 SUB_PROCEDURE Arg1:E48 Arg2:E49 +T92 Administration 1948 1952 oral +R49 MODIFY Arg1:T92 Arg2:E49 +T93 Detailed_description 1941 1947 direct +R50 MODIFY Arg1:T93 Arg2:E49 +T94 Detailed_description 1968 1988 trade name: Xarelto™ +R51 MODIFY Arg1:T94 Arg2:E49 +T95 Detailed_description 1990 1995 Bayer +R52 MODIFY Arg1:T95 Arg2:E49 +T96 Detailed_description 2011 2060 according to the results of the EINSTEIN-PE trial +R53 MODIFY Arg1:T96 Arg2:E49 +T97 Date 2066 2078 After 7 days +E50 Date:T97 +T98 Clinical_event 2082 2091 follow-up +E51 Clinical_event:T98 +T99 Diagnostic_procedure 2110 2112 CT +E52 Diagnostic_procedure:T99 +T100 Detailed_description 2092 2109 contrast-enhanced +R54 MODIFY Arg1:T100 Arg2:E52 +T101 Disease_disorder 2146 2156 thrombosis +E53 Disease_disorder:T101 +A4 TREND E53 DEC +T102 Clinical_event 2182 2193 followed up +E54 Clinical_event:T102 +T103 Medication 2199 2210 rivaroxaban +E55 Medication:T103 +* OVERLAP E1 E2 +R55 AFTER Arg1:E2 Arg2:E3 +* OVERLAP E3 E4 +R56 BEFORE Arg1:E4 Arg2:E11 +* OVERLAP E11 E12 E7 +R57 BEFORE Arg1:E7 Arg2:E9 +R58 MODIFY Arg1:T20 Arg2:E9 +R59 MODIFY Arg1:T29 Arg2:E13 +* OVERLAP E9 E8 +R60 BEFORE Arg1:E8 Arg2:E10 +* OVERLAP E10 E13 E14 E15 E16 E24 E19 E20 E21 E17 E22 E32 E33 E34 E35 E36 E37 +T104 Nonbiological_location 846 857 home doctor +R61 MODIFY Arg1:T104 Arg2:E17 +R62 BEFORE Arg1:E37 Arg2:E31 +* OVERLAP E31 E38 E28 E29 E30 E26 E25 E39 E40 E41 E42 +R63 BEFORE Arg1:E42 Arg2:E47 +* OVERLAP E47 E49 +R64 BEFORE Arg1:E49 Arg2:E50 +* OVERLAP E50 E51 E52 E53 +R65 BEFORE Arg1:E53 Arg2:E54 +* OVERLAP E54 E55