--- a +++ b/processing/MACCROBAT/28151882.ann @@ -0,0 +1,381 @@ +T1 Age 2 13 65-year-old +T2 Sex 14 19 woman +T3 Sign_symptom 45 49 pain +E1 Sign_symptom:T3 +T4 Biological_structure 40 44 back +T5 Detailed_description 29 39 persistent +R1 MODIFY Arg1:T4 Arg2:E1 +R2 MODIFY Arg1:T5 Arg2:E1 +T6 Duration 54 69 almost 3 months +E2 Duration:T6 +T7 Coreference 75 83 symptoms +E3 Coreference:T7 +R3 IDENTICAL Arg1:E3 Arg2:E1 +T8 Activity 106 113 walking +E4 Activity:T8 +T9 Activity 117 135 changing positions +E5 Activity:T9 +T10 Medication 179 190 painkillers +E6 Medication:T10 +T11 Sign_symptom 217 221 pain +E7 Sign_symptom:T11 +A1 POLARITY E7 NEG +T12 Severity 93 99 severe +R4 MODIFY Arg1:T12 Arg2:E3 +R5 CAUSE Arg1:E4 Arg2:E3 +R6 CAUSE Arg1:E5 Arg2:E3 +T13 Sign_symptom 225 233 numbness +E8 Sign_symptom:T13 +A2 POLARITY E8 NEG +T14 Biological_structure 241 245 legs +R7 MODIFY Arg1:T14 Arg2:E8 +R8 MODIFY Arg1:T14 Arg2:E7 +T15 Sign_symptom 286 306 voiding difficulties +E9 Sign_symptom:T15 +A3 POLARITY E9 NEG +T16 Biological_structure 278 285 bladder +T17 Biological_structure 269 274 bowel +R9 MODIFY Arg1:T16 Arg2:E9 +R10 MODIFY Arg1:T17 Arg2:E9 +T18 History 353 457 hypertension, coronary heart disease, cerebral infarction, and asthma, all of which were well controlled +T19 Diagnostic_procedure 459 472 Physical exam +E10 Diagnostic_procedure:T19 +T20 Disease_disorder 486 494 kyphosis +E11 Disease_disorder:T20 +T21 Biological_structure 502 516 thoracic spine +R11 MODIFY Arg1:T21 Arg2:E11 +T22 Detailed_description 517 537 in standing position +R12 MODIFY Arg1:T22 Arg2:E11 +T23 Sign_symptom 639 643 pain +E12 Sign_symptom:T23 +T24 Biological_structure 647 651 back +R13 MODIFY Arg1:T24 Arg2:E12 +T25 Diagnostic_procedure 806 811 X-ray +E13 Diagnostic_procedure:T25 +T26 Diagnostic_procedure 813 832 computed tomography +E14 Diagnostic_procedure:T26 +T27 Diagnostic_procedure 834 836 CT +E15 Diagnostic_procedure:T27 +R14 IDENTICAL Arg1:E15 Arg2:E14 +T28 Diagnostic_procedure 843 869 magnetic resonance imaging +E16 Diagnostic_procedure:T28 +T29 Diagnostic_procedure 871 874 MRI +E17 Diagnostic_procedure:T29 +R15 IDENTICAL Arg1:E17 Arg2:E16 +T30 Nonbiological_location 918 926 hospital +T31 Diagnostic_procedure 948 953 X-ray +E18 Diagnostic_procedure:T31 +T32 Detailed_description 940 947 lateral +R16 MODIFY Arg1:T32 Arg2:E18 +T33 Disease_disorder 965 973 fracture +E19 Disease_disorder:T33 +T34 Biological_structure 961 964 T12 +R17 MODIFY Arg1:T34 Arg2:E19 +T35 Diagnostic_procedure 992 1002 cobb angle +E20 Diagnostic_procedure:T35 +T36 Lab_value 979 991 40° kyphotic +R18 MODIFY Arg1:T36 Arg2:E20 +R19 MODIFY Arg1:E20 Arg2:E19 +T37 Diagnostic_procedure 1004 1006 CT +E21 Diagnostic_procedure:T37 +T38 Sign_symptom 1017 1043 intravertebral vacuum sign +E22 Sign_symptom:T38 +T39 Diagnostic_procedure 1066 1069 MRI +E23 Diagnostic_procedure:T39 +T40 Detailed_description 1045 1065 Sagittal T1-weighted +R20 MODIFY Arg1:T40 Arg2:E23 +T41 Sign_symptom 1159 1175 cord compression +E24 Sign_symptom:T41 +T42 Sign_symptom 1096 1123 intravertebral vacuum cleft +E25 Sign_symptom:T42 +T43 Biological_structure 1179 1182 T12 +R21 MODIFY Arg1:T43 Arg2:E24 +T44 Disease_disorder 1145 1153 breakage +E26 Disease_disorder:T44 +T45 Biological_structure 1128 1144 posterior cortex +R22 MODIFY Arg1:T45 Arg2:E26 +R23 MODIFY Arg1:T43 Arg2:E26 +R24 MODIFY Arg1:T43 Arg2:E25 +T46 Detailed_description 1079 1095 decreased signal +R25 MODIFY Arg1:T46 Arg2:E25 +T47 Diagnostic_procedure 1205 1208 MRI +E27 Diagnostic_procedure:T47 +T48 Detailed_description 1184 1204 Sagittal T2-weighted +R26 MODIFY Arg1:T48 Arg2:E27 +T49 Sign_symptom 1243 1270 intravertebral vacuum cleft +E28 Sign_symptom:T49 +T50 Detailed_description 1219 1235 increased signal +R27 MODIFY Arg1:T50 Arg2:E28 +T51 Disease_disorder 1303 1318 Kümmell disease +E29 Disease_disorder:T51 +T52 Lab_value 1320 1329 Stage III +R28 MODIFY Arg1:T52 Arg2:E29 +T53 Therapeutic_procedure 1339 1348 operation +E30 Therapeutic_procedure:T53 +T54 Medication 1369 1387 general anesthesia +E31 Medication:T54 +T55 Detailed_description 1392 1406 prone position +R29 MODIFY Arg1:T55 Arg2:E30 +R30 SUB_PROCEDURE Arg1:E31 Arg2:E30 +T56 Therapeutic_procedure 1419 1437 posterior exposure +E32 Therapeutic_procedure:T56 +T57 Biological_structure 1445 1450 spine +R31 MODIFY Arg1:T57 Arg2:E32 +T58 Detailed_description 1410 1418 standard +R32 MODIFY Arg1:T58 Arg2:E32 +R33 SUB_PROCEDURE Arg1:E32 Arg2:E30 +T59 Therapeutic_procedure 1462 1476 pedicle screws +E33 Therapeutic_procedure:T59 +R34 SUB_PROCEDURE Arg1:E33 Arg2:E30 +T60 Biological_structure 1501 1510 vertebrae +T61 Biological_structure 1511 1514 T10 +T62 Biological_structure 1516 1519 T11 +T63 Biological_structure 1521 1523 L1 +T64 Biological_structure 1529 1531 L2 +R35 MODIFY Arg1:T61 Arg2:T60 +R36 MODIFY Arg1:T62 Arg2:T60 +R37 MODIFY Arg1:T63 Arg2:T60 +R38 MODIFY Arg1:T64 Arg2:T60 +T65 Detailed_description 1538 1552 C-arm guidance +R39 MODIFY Arg1:T65 Arg2:E33 +T66 Detailed_description 1574 1633 connected on the left side with a temporary stabilizing rod +R40 MODIFY Arg1:T66 Arg2:E33 +T67 Therapeutic_procedure 1635 1646 Laminectomy +E34 Therapeutic_procedure:T67 +R41 SUB_PROCEDURE Arg1:E34 Arg2:E30 +T68 Therapeutic_procedure 1724 1748 subperiosteal dissection +E35 Therapeutic_procedure:T68 +T69 Detailed_description 1772 1782 right side +R42 MODIFY Arg1:T69 Arg2:E35 +R43 SUB_PROCEDURE Arg1:E35 Arg2:E34 +T70 Biological_structure 1799 1837 lateral wall of the T12 vertebral body +R44 MODIFY Arg1:T70 Arg2:E35 +T71 Therapeutic_procedure 1953 1960 removed +E36 Therapeutic_procedure:T71 +T72 Biological_structure 1929 1947 T12 vertebral body +T73 Biological_structure 1904 1921 articular process +T74 Biological_structure 1881 1899 right side pedicle +R45 MODIFY Arg1:T73 Arg2:T72 +R46 MODIFY Arg1:T74 Arg2:T72 +R47 MODIFY Arg1:T72 Arg2:E36 +T75 Therapeutic_procedure 2012 2019 removed +E37 Therapeutic_procedure:T75 +T76 Biological_structure 1981 2001 intervertebral disks +T77 Biological_structure 1974 1980 T12/L1 +T78 Biological_structure 1962 1969 T11/T12 +R48 MODIFY Arg1:T77 Arg2:T76 +R49 MODIFY Arg1:T78 Arg2:T76 +R50 MODIFY Arg1:T76 Arg2:E37 +R51 SUB_PROCEDURE Arg1:E36 Arg2:E30 +R52 SUB_PROCEDURE Arg1:E37 Arg2:E30 +T79 Therapeutic_procedure 2053 2056 rod +E38 Therapeutic_procedure:T79 +T80 Detailed_description 2031 2052 temporary stabilizing +R53 MODIFY Arg1:T80 Arg2:E38 +A4 POLARITY E38 NEG +T81 Therapeutic_procedure 2073 2076 rod +E39 Therapeutic_procedure:T81 +T82 Detailed_description 2077 2106 bended to the desired contour +R54 MODIFY Arg1:T82 Arg2:E39 +R55 SUB_PROCEDURE Arg1:E38 Arg2:E30 +R56 SUB_PROCEDURE Arg1:E39 Arg2:E30 +T83 Therapeutic_procedure 2119 2129 bone graft +E40 Therapeutic_procedure:T83 +T84 Therapeutic_procedure 2134 2147 titanium mesh +E41 Therapeutic_procedure:T84 +T85 Biological_structure 2167 2187 intervertebral space +R57 MODIFY Arg1:T85 Arg2:E41 +R58 MODIFY Arg1:T85 Arg2:E40 +T86 Detailed_description 2108 2118 Autologous +R59 MODIFY Arg1:T86 Arg2:E40 +R60 SUB_PROCEDURE Arg1:E40 Arg2:E30 +R61 SUB_PROCEDURE Arg1:E41 Arg2:E30 +T87 Therapeutic_procedure 2197 2200 rod +E42 Therapeutic_procedure:T87 +T88 Detailed_description 2189 2196 Another +R62 MODIFY Arg1:T88 Arg2:E42 +T89 Detailed_description 2201 2225 with the desired contour +R63 MODIFY Arg1:T89 Arg2:E42 +T90 Detailed_description 2247 2257 right side +R64 MODIFY Arg1:T90 Arg2:E42 +T91 Therapeutic_procedure 2268 2278 hemostasis +E43 Therapeutic_procedure:T91 +T92 Therapeutic_procedure 2316 2337 irrigated with saline +E44 Therapeutic_procedure:T92 +T93 Biological_structure 2295 2300 wound +R65 MODIFY Arg1:T93 Arg2:E44 +R66 SUB_PROCEDURE Arg1:E42 Arg2:E30 +R67 SUB_PROCEDURE Arg1:E43 Arg2:E30 +R68 SUB_PROCEDURE Arg1:E44 Arg2:E30 +T94 Duration 2482 2493 150 minutes +E45 Duration:T94 +T95 Disease_disorder 2509 2519 blood loss +E46 Disease_disorder:T95 +T96 Volume 2528 2534 600 mL +R69 MODIFY Arg1:T96 Arg2:E46 +R70 MODIFY Arg1:E45 Arg2:E30 +T97 Therapeutic_procedure 2393 2399 closed +E47 Therapeutic_procedure:T97 +T98 Therapeutic_procedure 2339 2352 Drainage tube +E48 Therapeutic_procedure:T98 +T99 Biological_structure 2374 2388 surgical wound +R71 MODIFY Arg1:T99 Arg2:E47 +T100 Detailed_description 2400 2414 layer-by-layer +R72 MODIFY Arg1:T100 Arg2:E47 +R73 SUB_PROCEDURE Arg1:E48 Arg2:E30 +R74 SUB_PROCEDURE Arg1:E47 Arg2:E30 +T101 Medication 2586 2596 antibiotic +E49 Medication:T101 +T102 Duration 2611 2616 1 day +E50 Duration:T102 +T103 Medication 2618 2632 pain treatment +E51 Medication:T103 +R75 MODIFY Arg1:E50 Arg2:E49 +T104 Duration 2637 2643 3 days +E52 Duration:T104 +R76 MODIFY Arg1:E52 Arg2:E51 +T105 Medication 2649 2662 anticoagulant +E53 Medication:T105 +T106 Duration 2675 2681 1 week +E54 Duration:T106 +R77 MODIFY Arg1:E54 Arg2:E53 +T107 Therapeutic_procedure 2687 2700 drainage tube +E55 Therapeutic_procedure:T107 +A5 POLARITY E55 NEG +T108 Date 2716 2722 3 days +E56 Date:T108 +T109 Diagnostic_procedure 2742 2760 volume of drainage +E57 Diagnostic_procedure:T109 +T110 Lab_value 2765 2793 less than 50 mL per 24 hours +R78 MODIFY Arg1:T110 Arg2:E57 +T111 Clinical_event 2807 2818 allowed out +E58 Clinical_event:T111 +T112 Therapeutic_procedure 2853 2861 orthosis +E59 Therapeutic_procedure:T112 +T113 Detailed_description 2845 2852 plastic +T114 Detailed_description 2833 2844 custom-made +R79 MODIFY Arg1:T113 Arg2:E59 +R80 MODIFY Arg1:T114 Arg2:E59 +T115 Date 2865 2877 1 week after +E60 Date:T115 +T116 Coreference 2901 2909 orthosis +E61 Coreference:T116 +R81 IDENTICAL Arg1:E61 Arg2:E59 +T117 Duration 2923 2940 at least 3 months +E62 Duration:T117 +T118 Clinical_event 2958 2969 allowed out +E63 Clinical_event:T118 +T119 Nonbiological_location 2973 2981 hospital +R82 MODIFY Arg1:T119 Arg2:E63 +T120 Nonbiological_location 2822 2825 bed +R83 MODIFY Arg1:T120 Arg2:E58 +T121 Date 2985 2998 12 days after +E64 Date:T121 +T122 Therapeutic_procedure 3014 3029 surgical suture +E65 Therapeutic_procedure:T122 +A6 POLARITY E65 NEG +T123 Diagnostic_procedure 3048 3064 Pain assessments +E66 Diagnostic_procedure:T123 +T124 Diagnostic_procedure 3090 3111 visual analogue scale +E67 Diagnostic_procedure:T124 +R84 SUB_PROCEDURE Arg1:E67 Arg2:E66 +T125 Diagnostic_procedure 3113 3116 VAS +E68 Diagnostic_procedure:T125 +R85 IDENTICAL Arg1:E68 Arg2:E67 +T126 Lab_value 3197 3204 9 score +T127 Lab_value 3206 3213 3 score +T128 Lab_value 3219 3226 2 score +T129 Activity 3306 3323 normal activities +E69 Activity:T129 +T130 Activity 3328 3344 returned to work +E70 Activity:T130 +T132 Date 3348 3362 3 months after +E71 Date:T132 +T133 Diagnostic_procedure 3383 3393 Cobb angle +E72 Diagnostic_procedure:T133 +T134 Lab_value 3374 3382 Kyphotic +R87 MODIFY Arg1:T134 Arg2:E72 +T136 Date 3141 3153 1 week after +E73 Date:T136 +T137 Date 3169 3181 1 year after +E74 Date:T137 +R89 MODIFY Arg1:E73 Arg2:T127 +R90 MODIFY Arg1:E74 Arg2:T128 +T138 Coreference 3119 3122 VAS +E75 Coreference:T138 +R91 IDENTICAL Arg1:E75 Arg2:E67 +R92 MODIFY Arg1:T126 Arg2:E75 +R93 MODIFY Arg1:T127 Arg2:E75 +R94 MODIFY Arg1:T128 Arg2:E75 +T139 Lab_value 3273 3284 improvement +R95 MODIFY Arg1:T139 Arg2:E75 +T141 Date 3412 3424 1 week after +E76 Date:T141 +T135 Date 3127 3139 preoperative +E77 Date:T135 +R88 MODIFY Arg1:E77 Arg2:T126 +T140 Date 3398 3410 preoperative +E78 Date:T140 +T142 Date 3440 3452 1 year after +E79 Date:T142 +T143 Lab_value 3468 3471 40° +T144 Lab_value 3473 3475 8° +T145 Lab_value 3481 3484 17° +R96 MODIFY Arg1:E78 Arg2:T143 +R97 MODIFY Arg1:E76 Arg2:T144 +R98 MODIFY Arg1:E79 Arg2:T145 +R99 MODIFY Arg1:T143 Arg2:E72 +R100 MODIFY Arg1:T144 Arg2:E72 +R101 MODIFY Arg1:T145 Arg2:E72 +T146 Lab_value 3531 3542 improvement +R102 MODIFY Arg1:T146 Arg2:E72 +* OVERLAP E1 E2 E3 E4 E5 E80 E6 E7 E8 E9 +T147 Sign_symptom 158 165 relieve +E80 Sign_symptom:T147 +R103 CAUSE Arg1:E6 Arg2:E80 +A7 POLARITY E80 MAYBE_POS +R104 BEFORE Arg1:E9 Arg2:E10 +* OVERLAP E10 E11 E12 E82 E13 E14 E16 E18 E19 E21 E22 E23 E25 E26 E24 E27 E28 E29 +T148 Detailed_description 542 583 lumbar vertebra bend forward and backward +R105 MODIFY Arg1:T148 Arg2:E11 +T149 Detailed_description 635 638 rap +R106 MODIFY Arg1:T149 Arg2:E12 +T150 Biological_structure 658 661 T12 +R107 MODIFY Arg1:T150 Arg2:T24 +T151 Diagnostic_procedure 792 804 examinations +E81 Diagnostic_procedure:T151 +T152 Biological_structure 784 791 sensory +T153 Detailed_description 764 778 stretch reflex +T154 Biological_structure 731 762 upper and lower extremity motor +R108 MODIFY Arg1:T152 Arg2:E81 +R109 MODIFY Arg1:T153 Arg2:E81 +R110 MODIFY Arg1:T154 Arg2:E81 +T155 Lab_value 715 727 unremarkable +R111 MODIFY Arg1:T155 Arg2:E81 +T156 Diagnostic_procedure 683 710 general medical examination +E82 Diagnostic_procedure:T156 +R112 SUB_PROCEDURE Arg1:E81 Arg2:E82 +R113 MODIFY Arg1:T30 Arg2:E13 +R114 MODIFY Arg1:T30 Arg2:E14 +R115 MODIFY Arg1:T30 Arg2:E16 +R116 BEFORE Arg1:E29 Arg2:E30 +* OVERLAP E30 E46 +R117 BEFORE Arg1:E46 Arg2:E49 +* OVERLAP E49 E51 E53 +R118 BEFORE Arg1:E53 Arg2:E55 +* OVERLAP E55 E56 E57 +R119 BEFORE Arg1:E57 Arg2:E58 +* OVERLAP E58 E59 E60 +R120 BEFORE Arg1:E60 Arg2:E61 +* OVERLAP E61 E62 +R121 AFTER Arg1:E62 Arg2:E63 +* OVERLAP E63 E64 E65 E66 E75 +R122 AFTER Arg1:E75 Arg2:E77 +R123 AFTER Arg1:E77 Arg2:E73 +R124 BEFORE Arg1:E73 Arg2:E74 +R125 AFTER Arg1:E74 Arg2:E69 +* OVERLAP E69 E70 E71 +R126 AFTER Arg1:E71 Arg2:E72 +* OVERLAP E72 E78 +R127 BEFORE Arg1:E78 Arg2:E76 +R128 BEFORE Arg1:E76 Arg2:E79