--- a +++ b/processing/MACCROBAT/28079821.ann @@ -0,0 +1,282 @@ +T1 Age 2 13 67-year-old +T2 Sex 14 19 woman +T3 Clinical_event 24 28 sent +E1 Clinical_event:T3 +T4 Nonbiological_location 32 52 emergency department +R1 MODIFY Arg1:T4 Arg2:E1 +T5 Sign_symptom 64 69 fever +E2 Sign_symptom:T5 +T6 Sign_symptom 74 78 sore +E3 Sign_symptom:T6 +T7 Biological_structure 79 85 throat +R2 MODIFY Arg1:T7 Arg2:E3 +T8 History 116 120 ESRD +#1 AnnotatorNotes T8 End-stage renal disease +T9 Disease_disorder 116 120 ESRD +E4 Disease_disorder:T9 +#2 AnnotatorNotes E4 End-stage renal disease +T10 Duration 168 176 15 years +E5 Duration:T10 +T11 Frequency 147 163 3 times per week +T12 Therapeutic_procedure 134 146 hemodialysis +E6 Therapeutic_procedure:T12 +R3 MODIFY Arg1:T11 Arg2:E6 +T13 Disease_disorder 178 191 hyperuricemia +E7 Disease_disorder:T13 +T14 Disease_disorder 196 200 gout +E8 Disease_disorder:T14 +T15 History 178 191 hyperuricemia +T16 History 196 200 gout +T17 Disease_disorder 235 247 dyslipidemia +E9 Disease_disorder:T17 +T18 Sign_symptom 249 261 hypertension +E10 Sign_symptom:T18 +T19 Disease_disorder 273 292 hyperparathyroidism +E11 Disease_disorder:T19 +T20 Disease_disorder 298 306 diabetes +E12 Disease_disorder:T20 +T21 Detailed_description 263 272 secondary +R4 MODIFY Arg1:T21 Arg2:E11 +T22 History 235 247 dyslipidemia +T23 History 249 261 hypertension +T24 History 273 292 hyperparathyroidism +T25 History 298 306 diabetes +T26 Diagnostic_procedure 312 320 hemogram +E13 Diagnostic_procedure:T26 +T27 Medication 639 650 antibiotics +E14 Medication:T27 +T28 Detailed_description 624 638 Broad-spectrum +R5 MODIFY Arg1:T28 Arg2:E14 +T29 Medication 656 668 piperacillin +E15 Medication:T29 +T30 Medication 677 687 tazobactam +E16 Medication:T30 +T31 Administration 696 700 i.v. +R6 MODIFY Arg1:T31 Arg2:E16 +T32 Dosage 688 695 0.25 gm +R7 MODIFY Arg1:T32 Arg2:E16 +T33 Dosage 669 672 2 g +R8 MODIFY Arg1:T33 Arg2:E15 +R9 SUB_PROCEDURE Arg1:E15 Arg2:E14 +R10 SUB_PROCEDURE Arg1:E16 Arg2:E14 +T34 Diagnostic_procedure 1927 1946 Chromosome analysis +E17 Diagnostic_procedure:T34 +T35 Biological_structure 1950 1961 bone marrow +R11 MODIFY Arg1:T35 Arg2:E17 +T36 Lab_value 1966 1982 normal karyotype +R12 MODIFY Arg1:T36 Arg2:E17 +T37 History 1996 2045 denied history of radiation or chemicals exposure +T38 Medication 2062 2072 febuxostat +E18 Medication:T38 +A1 POLARITY E18 NEG +T39 Duration 2077 2084 17 days +E19 Duration:T39 +T40 Clinical_event 2233 2242 discharge +E20 Clinical_event:T40 +T41 Diagnostic_procedure 2248 2251 WBC +E21 Diagnostic_procedure:T41 +T42 Diagnostic_procedure 2256 2274 differential count +E22 Diagnostic_procedure:T42 +T43 Lab_value 2290 2296 normal +R13 MODIFY Arg1:T43 Arg2:E22 +R14 MODIFY Arg1:T43 Arg2:E21 +T44 Clinical_event 2304 2313 follow-up +E23 Clinical_event:T44 +T45 Medication 1060 1070 febuxostat +E24 Medication:T45 +T46 Diagnostic_procedure 332 354 white blood cell count +E25 Diagnostic_procedure:T46 +T47 Diagnostic_procedure 356 359 WBC +E26 Diagnostic_procedure:T47 +R15 IDENTICAL Arg1:E26 Arg2:E25 +R16 SUB_PROCEDURE Arg1:E25 Arg2:E13 +T48 Lab_value 364 370 700/μL +R17 MODIFY Arg1:T48 Arg2:E25 +T49 Diagnostic_procedure 380 391 neutrophils +E27 Diagnostic_procedure:T49 +T50 Diagnostic_procedure 397 408 lymphocytes +E28 Diagnostic_procedure:T50 +T51 Diagnostic_procedure 416 425 monocytes +E29 Diagnostic_procedure:T51 +T52 Diagnostic_procedure 427 437 hemoglobin +E30 Diagnostic_procedure:T52 +T53 Diagnostic_procedure 453 467 platelet count +E31 Diagnostic_procedure:T53 +T54 Lab_value 469 479 131,000/μL +R18 MODIFY Arg1:T54 Arg2:E31 +T55 Lab_value 438 447 11.1 g/dL +R19 MODIFY Arg1:T55 Arg2:E30 +T56 Lab_value 413 415 2% +R20 MODIFY Arg1:T56 Arg2:E29 +T57 Lab_value 393 396 94% +R21 MODIFY Arg1:T57 Arg2:E28 +T58 Lab_value 377 379 2% +R22 MODIFY Arg1:T58 Arg2:E27 +R23 SUB_PROCEDURE Arg1:E27 Arg2:E13 +R24 SUB_PROCEDURE Arg1:E28 Arg2:E13 +R25 SUB_PROCEDURE Arg1:E29 Arg2:E13 +R26 SUB_PROCEDURE Arg1:E30 Arg2:E13 +R27 SUB_PROCEDURE Arg1:E31 Arg2:E13 +T59 Sign_symptom 513 524 neutropenia +E32 Sign_symptom:T59 +A2 POLARITY E32 UNCERTAIN +T60 Detailed_description 505 512 febrile +R28 MODIFY Arg1:T60 Arg2:E32 +T61 Detailed_description 529 534 acute +T62 Disease_disorder 535 546 pharyngitis +E33 Disease_disorder:T62 +R29 MODIFY Arg1:T61 Arg2:E33 +T63 Clinical_event 556 564 admitted +E34 Clinical_event:T63 +T64 Nonbiological_location 572 588 hematologic ward +R30 MODIFY Arg1:T64 Arg2:E34 +T65 Dosage 701 704 q8h +#3 AnnotatorNotes T65 every 8 hours +R31 MODIFY Arg1:T65 Arg2:E16 +T66 Sign_symptom 735 749 infection sign +E35 Sign_symptom:T66 +A3 TREND E35 DEC +T67 Medication 819 828 glipizide +E36 Medication:T67 +T68 Medication 839 850 saxagliptin +E37 Medication:T68 +T69 Medication 862 873 fenofibrate +E38 Medication:T69 +T70 Medication 885 903 aluminum hydroxide +E39 Medication:T70 +T71 Medication 916 926 folic acid +E40 Medication:T71 +T72 Medication 936 953 calcium carbonate +E41 Medication:T72 +T73 Medication 971 981 febuxostat +E42 Medication:T73 +T74 Duration 1110 1126 more than 1 year +E43 Duration:T74 +T75 Medication 1019 1031 epoetin-beta +E44 Medication:T75 +T76 Dosage 1032 1039 2000 iu +T77 Administration 1040 1044 i.v. +T78 Dosage 1044 1047 tiw +#4 AnnotatorNotes T78 three times a week +R32 MODIFY Arg1:T78 Arg2:E44 +R33 MODIFY Arg1:T76 Arg2:E44 +R34 MODIFY Arg1:T77 Arg2:E44 +T79 Dosage 851 860 2.5 mg qd +T80 Dosage 829 837 5 mg tid +R35 MODIFY Arg1:T80 Arg2:E36 +R36 MODIFY Arg1:T79 Arg2:E37 +T81 Dosage 874 883 600 mg qd +R37 MODIFY Arg1:T81 Arg2:E38 +T82 Dosage 904 914 324 mg tid +R38 MODIFY Arg1:T82 Arg2:E39 +T83 Dosage 927 934 5 mg qd +T84 Dosage 954 965 1000 mg tid +T85 Dosage 982 990 40 mg qd +R39 MODIFY Arg1:T85 Arg2:E42 +R40 MODIFY Arg1:T84 Arg2:E41 +R41 MODIFY Arg1:T83 Arg2:E40 +T86 Medication 1128 1138 Febuxostat +E45 Medication:T86 +T87 Date 1156 1172 2½ months before +E46 Date:T87 +T88 Medication 1225 1236 allopurinol +E47 Medication:T88 +T89 Dosage 1237 1245 50 mg qd +R42 MODIFY Arg1:T89 Arg2:E47 +T90 Date 1247 1263 Two weeks before +E48 Date:T90 +T91 Diagnostic_procedure 1293 1308 laboratory test +E49 Diagnostic_procedure:T91 +T92 Diagnostic_procedure 1318 1321 WBC +E50 Diagnostic_procedure:T92 +R43 SUB_PROCEDURE Arg1:E50 Arg2:E49 +T93 Lab_value 1322 1329 6000/μL +R44 MODIFY Arg1:T93 Arg2:E50 +T94 Diagnostic_procedure 1340 1349 uric acid +E51 Diagnostic_procedure:T94 +T95 Detailed_description 1334 1339 serum +R45 MODIFY Arg1:T95 Arg2:E51 +T96 Lab_value 1356 1365 9.8 mg/dL +R46 MODIFY Arg1:T96 Arg2:E51 +T97 Medication 1367 1377 Febuxostat +E52 Medication:T97 +A4 POLARITY E52 NEG +T98 Disease_disorder 1440 1455 agranulocytosis +E53 Disease_disorder:T98 +T99 Disease_disorder 1661 1671 infections +E54 Disease_disorder:T99 +A5 POLARITY E54 NEG +T100 Detailed_description 1632 1660 human immunodeficiency virus +T101 Detailed_description 1612 1627 cytomegalovirus +T102 Detailed_description 1592 1610 Epstein–Barr virus +R47 MODIFY Arg1:T100 Arg2:E54 +R48 MODIFY Arg1:T101 Arg2:E54 +R49 MODIFY Arg1:T102 Arg2:E54 +T103 Diagnostic_procedure 1673 1693 antinuclear antibody +E55 Diagnostic_procedure:T103 +T104 Diagnostic_procedure 1695 1698 ANA +E56 Diagnostic_procedure:T104 +R50 IDENTICAL Arg1:E56 Arg2:E55 +T105 Diagnostic_procedure 1704 1735 antiextractable nuclear antigen +E57 Diagnostic_procedure:T105 +T106 Diagnostic_procedure 1737 1745 anti-ENA +E58 Diagnostic_procedure:T106 +R51 IDENTICAL Arg1:E58 Arg2:E57 +T107 Lab_value 1757 1765 negative +R52 MODIFY Arg1:T107 Arg2:E57 +R53 MODIFY Arg1:T107 Arg2:E55 +T108 Diagnostic_procedure 1767 1790 Bone marrow examination +E59 Diagnostic_procedure:T108 +T109 Sign_symptom 1821 1833 hypocellular +E60 Sign_symptom:T109 +T110 Biological_structure 1834 1840 marrow +R54 MODIFY Arg1:T110 Arg2:E60 +T111 Diagnostic_procedure 1867 1884 myeloid component +E61 Diagnostic_procedure:T111 +T112 Lab_value 1855 1863 decrease +R55 MODIFY Arg1:T112 Arg2:E61 +T113 Sign_symptom 1916 1925 neoplasms +E62 Sign_symptom:T113 +A6 POLARITY E62 NEG +T114 Biological_structure 1904 1915 hematologic +R56 MODIFY Arg1:T114 Arg2:E62 +T115 Sign_symptom 2090 2101 neutropenia +E63 Sign_symptom:T115 +A7 TREND E63 DEC +T116 Diagnostic_procedure 2126 2129 WBC +E64 Diagnostic_procedure:T116 +T117 Diagnostic_procedure 2143 2153 neutrophil +E65 Diagnostic_procedure:T117 +T118 Lab_value 2130 2137 2100/μL +R57 MODIFY Arg1:T118 Arg2:E64 +T119 Lab_value 2154 2157 66% +R58 MODIFY Arg1:T119 Arg2:E65 +T120 Medication 2172 2209 granulocyte colony-stimulating factor +E66 Medication:T120 +A8 POLARITY E66 NEG +R59 AFTER Arg1:E1 Arg2:E2 +* OVERLAP E2 E3 +R60 AFTER Arg1:E3 Arg2:E4 +* OVERLAP E4 E6 E5 E7 E8 E9 E10 E11 E12 +R61 BEFORE Arg1:E12 Arg2:E13 +* OVERLAP E13 E32 E33 +R62 BEFORE Arg1:E33 Arg2:E34 +* OVERLAP E34 E14 +R63 BEFORE Arg1:E14 Arg2:E35 +R64 AFTER Arg1:E35 Arg2:E36 +* OVERLAP E36 E37 E38 E39 E40 E41 E42 E44 E24 E43 +A9 POLARITY E24 NEG +R65 BEFORE Arg1:E43 Arg2:E45 +* OVERLAP E45 E46 E47 +R66 AFTER Arg1:E47 Arg2:E48 +* OVERLAP E48 E49 +R67 SUB_PROCEDURE Arg1:E51 Arg2:E49 +R68 BEFORE Arg1:E49 Arg2:E52 +* OVERLAP E52 E53 E54 E55 E57 E59 E60 E61 E62 E17 +R69 BEFORE Arg1:E17 Arg2:E18 +* OVERLAP E18 E19 +R70 BEFORE Arg1:E19 Arg2:E63 +* OVERLAP E63 E64 E65 E66 +R71 BEFORE Arg1:E66 Arg2:E20 +R72 BEFORE Arg1:E20 Arg2:E21 +* OVERLAP E21 E22 E23