--- a +++ b/processing/MACCROBAT/27990013.ann @@ -0,0 +1,322 @@ +T1 Age 2 13 73-year-old +T2 Personal_background 14 22 Hispanic +T3 Sex 23 27 male +T4 Disease_disorder 55 77 chronic kidney disease +E1 Disease_disorder:T4 +T5 History 55 77 chronic kidney disease +T6 Medication 2360 2367 Aspirin +E2 Medication:T6 +T7 Disease_disorder 95 118 coronary artery disease +E3 Disease_disorder:T7 +T8 Detailed_description 82 94 three-vessel +R1 MODIFY Arg1:T8 Arg2:E3 +T9 Therapeutic_procedure 136 172 coronary artery bypass graft surgery +E4 Therapeutic_procedure:T9 +T10 Therapeutic_procedure 177 196 mitral valve repair +E5 Therapeutic_procedure:T10 +T11 Date 216 223 day two +E6 Date:T11 +T12 Sign_symptom 247 264 cardiac tamponade +E7 Sign_symptom:T12 +T13 Disease_disorder 298 312 cardiac arrest +E8 Disease_disorder:T13 +T14 Therapeutic_procedure 319 341 temporary pacing wires +E9 Therapeutic_procedure:T14 +A1 POLARITY E9 MAYBE_NEG +T15 Therapeutic_procedure 371 398 cardiovascular life support +E10 Therapeutic_procedure:T15 +T16 Therapeutic_procedure 424 434 sternotomy +E11 Therapeutic_procedure:T16 +T17 Detailed_description 412 423 exploratory +R2 MODIFY Arg1:T17 Arg2:E11 +T18 Clinical_event 471 482 transferred +E12 Clinical_event:T18 +T19 Nonbiological_location 490 509 intensive care unit +T20 Nonbiological_location 511 514 ICU +R3 IDENTICAL Arg1:T20 Arg2:T19 +R4 MODIFY Arg1:T19 Arg2:E12 +T21 Disease_disorder 574 587 renal failure +E13 Disease_disorder:T21 +A2 TREND E13 INC +T22 Therapeutic_procedure 610 622 hemodialysis +E14 Therapeutic_procedure:T22 +T23 Therapeutic_procedure 626 642 nasogastric tube +E15 Therapeutic_procedure:T23 +T24 Date 672 679 day two +E16 Date:T24 +T25 Therapeutic_procedure 703 720 enteral nutrition +E17 Therapeutic_procedure:T25 +T26 Detailed_description 46 54 stage IV +R5 MODIFY Arg1:T26 Arg2:E1 +T27 Sign_symptom 765 785 cognitive impairment +E18 Sign_symptom:T27 +T28 Diagnostic_procedure 795 814 swallowing function +E19 Diagnostic_procedure:T28 +T29 Diagnostic_procedure 822 850 Modified Barium Swallow test +E20 Diagnostic_procedure:T29 +R6 SUB_PROCEDURE Arg1:E20 Arg2:E19 +T30 Lab_value 790 794 poor +E21 Lab_value:T30 +R7 MODIFY Arg1:E21 Arg2:E20 +T31 Diagnostic_procedure 856 875 coagulation profile +E22 Diagnostic_procedure:T31 +T32 Diagnostic_procedure 911 941 international normalized ratio +E23 Diagnostic_procedure:T32 +R8 SUB_PROCEDURE Arg1:E23 Arg2:E22 +T33 Lab_value 945 949 1.04 +E24 Lab_value:T33 +R9 MODIFY Arg1:E24 Arg2:E23 +T34 Diagnostic_procedure 954 981 partial thromboplastin time +E25 Diagnostic_procedure:T34 +T35 Lab_value 985 995 36 seconds +E26 Lab_value:T35 +R10 SUB_PROCEDURE Arg1:E25 Arg2:E22 +R11 MODIFY Arg1:E26 Arg2:E25 +T36 Diagnostic_procedure 999 1019 complete blood count +E27 Diagnostic_procedure:T36 +T37 Diagnostic_procedure 1029 1039 hemoglobin +E28 Diagnostic_procedure:T37 +T38 Lab_value 1043 1067 11.6 grams per deciliter +E29 Lab_value:T38 +R12 MODIFY Arg1:E29 Arg2:E28 +T39 Diagnostic_procedure 1071 1081 hematocrit +E30 Diagnostic_procedure:T39 +T40 Lab_value 1085 1090 34.9% +E31 Lab_value:T40 +R13 MODIFY Arg1:E31 Arg2:E30 +T41 Diagnostic_procedure 1104 1113 platelets +E32 Diagnostic_procedure:T41 +T42 Lab_value 1096 1103 281×103 +E33 Lab_value:T42 +T43 Detailed_description 1114 1128 per microliter +R14 MODIFY Arg1:T43 Arg2:E32 +R15 MODIFY Arg1:E33 Arg2:E32 +R16 SUB_PROCEDURE Arg1:E28 Arg2:E27 +R17 SUB_PROCEDURE Arg1:E30 Arg2:E27 +R18 SUB_PROCEDURE Arg1:E32 Arg2:E27 +T44 Diagnostic_procedure 1134 1153 blood urea nitrogen +E34 Diagnostic_procedure:T44 +T45 Lab_value 1158 1181 55 milligrams/deciliter +E35 Lab_value:T45 +T46 Diagnostic_procedure 1197 1207 creatinine +E36 Diagnostic_procedure:T46 +T47 Detailed_description 1191 1196 serum +R19 MODIFY Arg1:T47 Arg2:E36 +T48 Lab_value 1212 1237 5.22 milligrams/deciliter +E37 Lab_value:T48 +R20 MODIFY Arg1:E37 Arg2:E36 +R21 MODIFY Arg1:E35 Arg2:E34 +T49 Medication 1262 1269 aspirin +E38 Medication:T49 +T50 Dosage 1270 1283 81 mg per day +R22 MODIFY Arg1:T50 Arg2:E38 +T51 Therapeutic_procedure 1298 1313 cardiac surgery +E39 Therapeutic_procedure:T51 +T52 Medication 1334 1354 anticoagulant agents +E40 Medication:T52 +A3 POLARITY E40 NEG +T53 History 1364 1402 did not have a history of coagulopathy +T54 Disease_disorder 1390 1402 coagulopathy +E41 Disease_disorder:T54 +A4 POLARITY E41 NEG +T55 Therapeutic_procedure 722 740 PEG tube insertion +E42 Therapeutic_procedure:T55 +A5 POLARITY E42 UNCERTAIN +T56 Therapeutic_procedure 1404 1422 PEG tube insertion +E43 Therapeutic_procedure:T56 +T57 Medication 1483 1493 anesthesia +E44 Medication:T57 +T58 Administration 1471 1482 intravenous +R23 MODIFY Arg1:T58 Arg2:E44 +T59 Date 1455 1464 day eight +E45 Date:T59 +T60 Diagnostic_procedure 1499 1525 esophagogastroduodenoscopy +E46 Diagnostic_procedure:T60 +T61 Diagnostic_procedure 1527 1530 EGD +E47 Diagnostic_procedure:T61 +R24 IDENTICAL Arg1:E47 Arg2:E46 +T62 Other_event 1557 1567 difficulty +E48 Other_event:T62 +A6 POLARITY E48 NEG +T63 Sign_symptom 1626 1634 bleeding +E49 Sign_symptom:T63 +A7 POLARITY E49 NEG +T64 Sign_symptom 1598 1610 erythematous +E50 Sign_symptom:T64 +T65 Severity 1587 1597 moderately +R25 MODIFY Arg1:T65 Arg2:E50 +T66 Detailed_description 1579 1586 diffuse +R26 MODIFY Arg1:T66 Arg2:E50 +T67 Biological_structure 1611 1617 mucosa +R27 MODIFY Arg1:T67 Arg2:E50 +R28 MODIFY Arg1:T67 Arg2:E49 +T68 Biological_structure 1642 1656 gastric antrum +R29 MODIFY Arg1:T68 Arg2:E49 +R30 MODIFY Arg1:T68 Arg2:E50 +T69 Sign_symptom 1715 1723 hematoma +E51 Sign_symptom:T69 +T70 Severity 1697 1714 rapidly expanding +R31 MODIFY Arg1:T70 Arg2:E51 +T71 Biological_structure 1752 1773 needle insertion site +R32 MODIFY Arg1:T71 Arg2:E51 +T72 Therapeutic_procedure 1675 1692 PEG tube placemen +E52 Therapeutic_procedure:T72 +A8 POLARITY E52 NEG +T73 Coreference 1779 1788 procedure +E53 Coreference:T73 +R33 IDENTICAL Arg1:E53 Arg2:E52 +T74 Clinical_event 1821 1830 sent back +E54 Clinical_event:T74 +T75 Nonbiological_location 1838 1841 ICU +R34 MODIFY Arg1:T75 Arg2:E54 +T76 Therapeutic_procedure 1849 1865 nasogastric tube +E55 Therapeutic_procedure:T76 +T77 Medication 1896 1908 desmopressin +E56 Medication:T77 +T78 Administration 1884 1895 intravenous +T79 Dosage 1869 1880 single dose +T80 Dosage 1910 1932 0.3 microgram/kilogram +R35 MODIFY Arg1:T80 Arg2:E56 +R36 MODIFY Arg1:T78 Arg2:E56 +R37 MODIFY Arg1:T79 Arg2:E56 +T81 Sign_symptom 1974 1989 uremic bleeding +E57 Sign_symptom:T81 +A9 POLARITY E57 UNCERTAIN +T82 Sign_symptom 2019 2027 bleeding +E58 Sign_symptom:T82 +A10 POLARITY E58 NEG +T83 Biological_structure 2002 2018 gastrointestinal +R38 MODIFY Arg1:T83 Arg2:E58 +T84 Diagnostic_procedure 2057 2074 platelet function +E59 Diagnostic_procedure:T84 +T85 Diagnostic_procedure 2078 2101 platelet function assay +E60 Diagnostic_procedure:T85 +R39 SUB_PROCEDURE Arg1:E60 Arg2:E59 +T86 Diagnostic_procedure 2103 2106 PFA +E61 Diagnostic_procedure:T86 +R40 IDENTICAL Arg1:E61 Arg2:E60 +T87 Medication 2126 2138 desmopressin +E62 Medication:T87 +T88 Administration 2139 2148 injection +R41 MODIFY Arg1:T88 Arg2:E62 +T89 Diagnostic_procedure 2150 2153 PFA +E63 Diagnostic_procedure:T89 +T90 Diagnostic_procedure 2154 2187 collagen/epinephrine closure time +E64 Diagnostic_procedure:T90 +R42 SUB_PROCEDURE Arg1:E64 Arg2:E63 +T91 Diagnostic_procedure 2231 2256 collagen/ADP closure time +E65 Diagnostic_procedure:T91 +T92 Lab_value 2192 2203 195 seconds +E66 Lab_value:T92 +T93 Lab_value 2261 2271 76 seconds +E67 Lab_value:T93 +R43 MODIFY Arg1:E67 Arg2:E65 +R44 MODIFY Arg1:E66 Arg2:E64 +T94 Disease_disorder 2306 2326 platelet dysfunction +E68 Disease_disorder:T94 +T95 Medication 2341 2348 aspirin +E69 Medication:T95 +T96 Disease_disorder 2352 2358 uremia +E70 Disease_disorder:T96 +A11 POLARITY E2 NEG +T97 Therapeutic_procedure 2397 2406 monitored +E71 Therapeutic_procedure:T97 +T98 Diagnostic_procedure 2420 2440 complete blood count +E72 Diagnostic_procedure:T98 +T99 Diagnostic_procedure 2445 2460 metabolic panel +E73 Diagnostic_procedure:T99 +T100 Frequency 2414 2419 daily +R45 MODIFY Arg1:T100 Arg2:E72 +R46 MODIFY Arg1:T100 Arg2:E73 +T101 Date 2462 2478 Three days later +E74 Date:T101 +T102 Therapeutic_procedure 2521 2539 PEG tube placement +E75 Therapeutic_procedure:T102 +T103 Diagnostic_procedure 2541 2544 PFA +E76 Diagnostic_procedure:T103 +T104 Diagnostic_procedure 2545 2578 collagen/epinephrine closure time +E77 Diagnostic_procedure:T104 +R47 SUB_PROCEDURE Arg1:E77 Arg2:E76 +T105 Coreference 2593 2602 procedure +E78 Coreference:T105 +R48 IDENTICAL Arg1:E78 Arg2:E75 +T106 Lab_value 2607 2616 gone down +E79 Lab_value:T106 +T107 Lab_value 2620 2631 141 seconds +E80 Lab_value:T107 +R49 MODIFY Arg1:E79 Arg2:E77 +R50 MODIFY Arg1:E80 Arg2:E77 +T108 Medication 2661 2668 aspirin +E81 Medication:T108 +A12 POLARITY E81 NEG +T109 Diagnostic_procedure 2691 2705 renal function +E82 Diagnostic_procedure:T109 +T110 Lab_value 2676 2687 improvement +E83 Lab_value:T110 +R51 MODIFY Arg1:E83 Arg2:E82 +T111 Diagnostic_procedure 2707 2710 EGD +E84 Diagnostic_procedure:T111 +T112 Sign_symptom 2761 2769 bruising +E85 Sign_symptom:T112 +T113 Biological_structure 2742 2760 gastric submucosal +T114 Color 2735 2741 bluish +T115 Texture 2729 2733 flat +R52 MODIFY Arg1:T113 Arg2:E85 +R53 MODIFY Arg1:T114 Arg2:E85 +R54 MODIFY Arg1:T115 Arg2:E85 +T116 Sign_symptom 2798 2806 hematoma +E86 Sign_symptom:T116 +T117 Therapeutic_procedure 2823 2831 PEG tube +E87 Therapeutic_procedure:T117 +A13 POLARITY E75 UNCERTAIN +T118 Biological_structure 2862 2875 adjacent site +R55 MODIFY Arg1:T118 Arg2:E87 +T119 Duration 2900 2915 following month +E88 Duration:T119 +T120 Therapeutic_procedure 2950 2957 feeding +E89 Therapeutic_procedure:T120 +T121 Therapeutic_procedure 2970 2978 PEG tube +E90 Therapeutic_procedure:T121 +T122 Sign_symptom 2987 3001 adverse events +E91 Sign_symptom:T122 +A14 POLARITY E91 NEG +* OVERLAP E1 E3 +T123 Clinical_event 123 131 admitted +E92 Clinical_event:T123 +R56 BEFORE Arg1:E3 Arg2:E92 +* OVERLAP E92 E4 E5 +R57 BEFORE Arg1:E5 Arg2:E6 +* OVERLAP E6 E7 +R58 BEFORE Arg1:E7 Arg2:E8 +* OVERLAP E8 E9 E10 E11 +R59 BEFORE Arg1:E11 Arg2:E12 +T124 Nonbiological_location 555 558 ICU +T125 Clinical_event 559 568 admission +E93 Clinical_event:T125 +R60 MODIFY Arg1:T124 Arg2:E93 +* OVERLAP E12 E93 E13 E14 E15 E16 E17 E42 E18 E19 E22 E27 E34 E36 E38 +R61 AFTER Arg1:E38 Arg2:E39 +R62 BEFORE Arg1:E39 Arg2:E40 +R63 AFTER Arg1:E40 Arg2:E41 +R64 BEFORE Arg1:E41 Arg2:E43 +* OVERLAP E43 E45 E44 E46 E48 E50 E49 E52 E51 E53 +R65 BEFORE Arg1:E53 Arg2:E54 +* OVERLAP E54 E55 +R66 BEFORE Arg1:E55 Arg2:E56 +* OVERLAP E56 E57 E58 E59 +R67 AFTER Arg1:E59 Arg2:E62 +R68 BEFORE Arg1:E62 Arg2:E63 +R69 SUB_PROCEDURE Arg1:E65 Arg2:E63 +* OVERLAP E63 E68 E69 E70 +R70 BEFORE Arg1:E70 Arg2:E2 +* OVERLAP E2 E71 E72 E73 +R71 BEFORE Arg1:E73 Arg2:E74 +* OVERLAP E74 E75 +R72 AFTER Arg1:E75 Arg2:E76 +* OVERLAP E76 E81 E82 +R73 BEFORE Arg1:E82 Arg2:E84 +* OVERLAP E84 E85 +R74 AFTER Arg1:E85 Arg2:E86 +R75 BEFORE Arg1:E86 Arg2:E87 +R76 BEFORE Arg1:E87 Arg2:E88 +* OVERLAP E88 E89 E90 E91