--- a +++ b/processing/MACCROBAT/27821134.ann @@ -0,0 +1,413 @@ +T1 Age 17 28 59-year-old +T2 Sex 29 32 man +T3 Date 58 73 age of 49 years +E1 Date:T3 +T4 Disease_disorder 48 50 PD +E2 Disease_disorder:T4 +#1 AnnotatorNotes E2 Parkinson's disease +T5 Date 3988 4000 7 days later +E3 Date:T5 +T6 Diagnostic_procedure 180 195 quality of life +E4 Diagnostic_procedure:T6 +T7 Lab_value 155 165 diminished +E5 Lab_value:T7 +R1 MODIFY Arg1:E5 Arg2:E4 +T8 Therapeutic_procedure 264 267 DBS +E6 Therapeutic_procedure:T8 +#2 AnnotatorNotes E6 Deep Brain Stimulation +T9 Detailed_description 252 263 subthalamic +T10 Detailed_description 242 251 bilateral +R2 MODIFY Arg1:T9 Arg2:E6 +R3 MODIFY Arg1:T10 Arg2:E6 +T11 Diagnostic_procedure 269 297 Multidisciplinary evaluation +E7 Diagnostic_procedure:T11 +T12 Diagnostic_procedure 333 359 standardized levodopa test +E8 Diagnostic_procedure:T12 +T13 Lab_value 303 316 75 % positive +E9 Lab_value:T13 +R4 MODIFY Arg1:E9 Arg2:E8 +T14 Disease_disorder 374 391 cognitive decline +E10 Disease_disorder:T14 +A1 POLARITY E10 NEG +T15 Disease_disorder 395 418 psychiatric comorbitity +E11 Disease_disorder:T15 +A2 POLARITY E11 NEG +T16 Disease_disorder 446 458 brain damage +E12 Disease_disorder:T16 +A3 POLARITY E12 NEG +T17 Therapeutic_procedure 536 539 DBS +E13 Therapeutic_procedure:T17 +T18 Medication 637 645 levodopa +E14 Medication:T18 +T19 Medication 660 669 piribedil +E15 Medication:T19 +T20 Dosage 624 633 1112.5 mg +T21 Dosage 650 656 150 mg +R5 MODIFY Arg1:T21 Arg2:E15 +R6 MODIFY Arg1:T20 Arg2:E14 +T22 Diagnostic_procedure 3923 3937 Cardiac workup +E16 Diagnostic_procedure:T22 +T23 Lab_value 3942 3950 negative +E17 Lab_value:T23 +R7 MODIFY Arg1:E17 Arg2:E16 +T24 History 681 725 no history of orofacial or cervical dystonia +T25 Disease_disorder 717 725 dystonia +E18 Disease_disorder:T25 +T26 Biological_structure 708 716 cervical +T27 Biological_structure 695 704 orofacial +R8 MODIFY Arg1:T26 Arg2:E18 +R9 MODIFY Arg1:T27 Arg2:E18 +A4 POLARITY E18 NEG +T28 Disease_disorder 130 141 dyskinesias +E19 Disease_disorder:T28 +T29 Sign_symptom 75 87 Fluctuations +E20 Sign_symptom:T29 +T31 Disease_disorder 4048 4050 PD +E21 Disease_disorder:T31 +T32 Diagnostic_procedure 813 839 Neuropsychological testing +E22 Diagnostic_procedure:T32 +T33 Lab_value 844 852 adequate +E23 Lab_value:T33 +R11 MODIFY Arg1:E23 Arg2:E22 +T34 Other_event 734 744 “on” state +E24 Other_event:T34 +T35 Sign_symptom 761 766 alert +E25 Sign_symptom:T35 +T36 Sign_symptom 779 811 signs of psychiatric comorbidity +E26 Sign_symptom:T36 +A5 POLARITY E26 NEG +T37 Diagnostic_procedure 895 905 swallowing +E27 Diagnostic_procedure:T37 +T38 Lab_value 910 916 normal +E28 Lab_value:T38 +R12 MODIFY Arg1:E28 Arg2:E27 +T39 Sign_symptom 865 879 nerve deficits +E29 Sign_symptom:T39 +A6 POLARITY E29 NEG +T40 Biological_structure 857 864 cranial +R13 MODIFY Arg1:T40 Arg2:E29 +T41 Diagnostic_procedure 927 945 postural stability +E30 Diagnostic_procedure:T41 +T42 Diagnostic_procedure 918 922 Gait +E31 Diagnostic_procedure:T42 +T43 Lab_value 950 956 normal +E32 Lab_value:T43 +R14 MODIFY Arg1:E32 Arg2:E30 +R15 MODIFY Arg1:E32 Arg2:E31 +T44 Sign_symptom 970 978 rigidity +E33 Sign_symptom:T44 +T45 Severity 962 969 minimal +R16 MODIFY Arg1:T45 Arg2:E33 +T46 Biological_structure 986 990 neck +T47 Biological_structure 995 1004 right arm +R17 MODIFY Arg1:T46 Arg2:E33 +R18 MODIFY Arg1:T47 Arg2:E33 +T48 Diagnostic_procedure 1006 1031 Coordinative motor skills +E34 Diagnostic_procedure:T48 +T49 Lab_value 1071 1081 restricted +E35 Lab_value:T49 +T50 Biological_structure 1089 1098 left hand +R19 MODIFY Arg1:T50 Arg2:E35 +T51 Diagnostic_procedure 1046 1065 pro- and supination +E36 Diagnostic_procedure:T51 +R20 SUB_PROCEDURE Arg1:E36 Arg2:E34 +R21 MODIFY Arg1:E35 Arg2:E34 +T52 Sign_symptom 1100 1111 Dyskinesias +E37 Sign_symptom:T52 +T53 Sign_symptom 1139 1149 impairment +E38 Sign_symptom:T53 +T54 Severity 1130 1138 moderate +R22 MODIFY Arg1:T54 Arg2:E38 +T55 Other_event 1158 1169 “off” state +E39 Other_event:T55 +T56 Medication 1180 1190 medication +E40 Medication:T56 +A7 POLARITY E40 NEG +T57 Duration 1204 1208 12 h +E41 Duration:T57 +T58 Sign_symptom 1234 1244 dysarthria +E42 Sign_symptom:T58 +T59 Sign_symptom 1249 1258 dysphonia +E43 Sign_symptom:T59 +T60 Severity 1229 1233 mild +R23 MODIFY Arg1:T60 Arg2:E42 +R24 MODIFY Arg1:T60 Arg2:E43 +T61 Sign_symptom 1268 1274 tremor +E44 Sign_symptom:T61 +T62 Detailed_description 1260 1267 resting +R25 MODIFY Arg1:T62 Arg2:E44 +T63 Biological_structure 1282 1291 right arm +T64 Biological_structure 1296 1299 leg +T65 Sign_symptom 1326 1332 tremor +E45 Sign_symptom:T65 +T66 Detailed_description 1319 1325 action +T67 Severity 1312 1318 slight +R26 MODIFY Arg1:T67 Arg2:E45 +R27 MODIFY Arg1:T66 Arg2:E45 +T68 Biological_structure 1340 1350 right hand +R28 MODIFY Arg1:T68 Arg2:E45 +T69 Sign_symptom 1352 1360 Rigidity +E46 Sign_symptom:T69 +T70 Severity 1365 1371 severe +R29 MODIFY Arg1:T70 Arg2:E46 +T71 Biological_structure 1379 1383 neck +R30 MODIFY Arg1:T71 Arg2:T70 +T72 Biological_structure 1399 1404 right +T73 Biological_structure 1422 1431 left side +T74 Severity 1385 1391 marked +T75 Severity 1410 1414 mild +R31 MODIFY Arg1:T72 Arg2:T74 +R32 MODIFY Arg1:T73 Arg2:T75 +R33 MODIFY Arg1:T74 Arg2:E46 +R34 MODIFY Arg1:T75 Arg2:E46 +T76 Diagnostic_procedure 1433 1445 Motor skills +E47 Diagnostic_procedure:T76 +T77 Biological_structure 1453 1458 hands +R35 MODIFY Arg1:T77 Arg2:E47 +T78 Lab_value 1473 1481 impaired +E48 Lab_value:T78 +R36 MODIFY Arg1:E48 Arg2:E47 +T79 Diagnostic_procedure 1483 1487 Gait +E49 Diagnostic_procedure:T79 +T80 Lab_value 1492 1496 slow +E50 Lab_value:T80 +T81 Lab_value 1501 1508 unaided +E51 Lab_value:T81 +R37 MODIFY Arg1:E50 Arg2:E49 +R38 MODIFY Arg1:E51 Arg2:E49 +T82 Sign_symptom 1542 1550 freezing +E52 Sign_symptom:T82 +T83 Frequency 1529 1541 intermittent +R39 MODIFY Arg1:T83 Arg2:E52 +T84 Sign_symptom 1567 1585 dystonic posturing +E53 Sign_symptom:T84 +T85 Severity 1562 1566 mild +R40 MODIFY Arg1:T85 Arg2:E53 +T86 Biological_structure 1593 1603 right foot +R41 MODIFY Arg1:T86 Arg2:E53 +T87 Sign_symptom 1638 1644 spasms +E54 Sign_symptom:T87 +A8 POLARITY E54 NEG +T88 Biological_structure 1628 1637 laryngeal +R42 MODIFY Arg1:T88 Arg2:E54 +T89 Therapeutic_procedure 1673 1680 surgery +E55 Therapeutic_procedure:T89 +T90 Medication 1699 1722 dopaminergic medication +E56 Medication:T90 +T91 Time 1743 1752 07:00 p.m +E57 Time:T91 +T92 Medication 1775 1783 levodopa +E58 Medication:T92 +A9 POLARITY E58 NEG +T93 Diagnostic_procedure 1807 1829 intraoperative testing +E59 Diagnostic_procedure:T93 +T94 Administration 1759 1771 bedtime dose +R43 MODIFY Arg1:T94 Arg2:E58 +T95 Date 1838 1844 day of +E60 Date:T95 +T96 Therapeutic_procedure 1849 1858 operation +E61 Therapeutic_procedure:T96 +T97 Medication 1924 1941 local anaesthesia +E62 Medication:T97 +T98 Time 1949 1958 09:00 a.m +E63 Time:T98 +T99 Therapeutic_procedure 1899 1917 stereotactic frame +E64 Therapeutic_procedure:T99 +R44 SUB_PROCEDURE Arg1:E64 Arg2:E61 +T100 Activity 2046 2067 semi-sitting position +E65 Activity:T100 +T101 Activity 2173 2179 flexed +E66 Activity:T101 +T102 Detailed_description 2180 2190 anteriorly +T103 Biological_structure 2155 2159 head +R45 MODIFY Arg1:T103 Arg2:E66 +R46 MODIFY Arg1:T102 Arg2:E66 +T104 Therapeutic_procedure 2213 2222 electrode +E67 Therapeutic_procedure:T104 +T105 Detailed_description 2208 2212 left +R47 MODIFY Arg1:T105 Arg2:E67 +T106 Therapeutic_procedure 2268 2276 bur hole +E68 Therapeutic_procedure:T106 +T107 Biological_structure 2284 2294 right side +R48 MODIFY Arg1:T107 Arg2:E68 +T108 Sign_symptom 2322 2330 cramping +E69 Sign_symptom:T108 +T109 Biological_structure 2338 2342 neck +R49 MODIFY Arg1:T109 Arg2:E69 +T110 Biological_structure 2347 2361 facial muscles +R50 MODIFY Arg1:T110 Arg2:E69 +T111 Sign_symptom 2373 2395 difficulties breathing +E70 Sign_symptom:T111 +T112 Diagnostic_procedure 2420 2434 pulse oximetry +E71 Diagnostic_procedure:T112 +T113 Lab_value 2442 2457 good saturation +E72 Lab_value:T113 +T114 Lab_value 2470 2475 ≥95 % +E73 Lab_value:T114 +R51 MODIFY Arg1:E72 Arg2:E71 +R52 MODIFY Arg1:E73 Arg2:E71 +T115 Sign_symptom 2494 2513 dystonic dysarthria +E74 Sign_symptom:T115 +T116 Diagnostic_procedure 2519 2544 Microelectrode recordings +E75 Diagnostic_procedure:T116 +T117 Diagnostic_procedure 2571 2602 macroelectrode test stimulation +E76 Diagnostic_procedure:T117 +T118 Sign_symptom 2672 2679 stridor +E77 Sign_symptom:T118 +T119 Detailed_description 2660 2671 inspiratory +T120 Detailed_description 2647 2659 high-pitched +R53 MODIFY Arg1:T119 Arg2:E77 +R54 MODIFY Arg1:T120 Arg2:E77 +T121 Diagnostic_procedure 2681 2695 Pulse oximetry +E78 Diagnostic_procedure:T121 +T122 Lab_value 2703 2731 decreasing oxygen saturation +E79 Lab_value:T122 +T123 Time 2735 2744 02:15 p.m +E80 Time:T123 +R55 MODIFY Arg1:E79 Arg2:E78 +T124 Sign_symptom 2786 2797 tachycardia +E81 Sign_symptom:T124 +T125 Detailed_description 2771 2777 narrow +T126 Detailed_description 2778 2785 complex +R56 MODIFY Arg1:T126 Arg2:E81 +R57 MODIFY Arg1:T125 Arg2:E81 +T127 Sign_symptom 2845 2857 unresponsive +E82 Sign_symptom:T127 +T128 Time 2809 2824 Within a minute +E83 Time:T128 +T129 Therapeutic_procedure 2859 2880 Cardiac resuscitation +E84 Therapeutic_procedure:T129 +T130 Therapeutic_procedure 2930 2939 intubated +E85 Therapeutic_procedure:T130 +T131 Detailed_description 2915 2929 fiberoptically +R58 MODIFY Arg1:T131 Arg2:E85 +T132 Therapeutic_procedure 2978 2996 stereotactic frame +E86 Therapeutic_procedure:T132 +T133 Therapeutic_procedure 2961 2970 front bar +E87 Therapeutic_procedure:T133 +A11 POLARITY E87 NEG +R59 MODIFY Arg1:E87 Arg2:E86 +T134 Therapeutic_procedure 3016 3026 intubation +E88 Therapeutic_procedure:T134 +T135 Detailed_description 3005 3015 fiberoptic +R60 MODIFY Arg1:T135 Arg2:E88 +T136 Sign_symptom 3037 3042 spasm +E89 Sign_symptom:T136 +T138 Biological_structure 3027 3036 laryngeal +R61 MODIFY Arg1:T138 Arg2:E89 +T137 Diagnostic_procedure 3069 3097 transthoracic echocardiogram +E90 Diagnostic_procedure:T137 +T139 Sign_symptom 3168 3177 pathology +E91 Sign_symptom:T139 +A10 POLARITY E91 NEG +T140 Biological_structure 3160 3167 cardiac +R62 MODIFY Arg1:T140 Arg2:E91 +T141 Sign_symptom 3185 3196 air bubbles +E92 Sign_symptom:T141 +A12 POLARITY E92 NEG +T142 Therapeutic_procedure 3198 3209 Stimulation +E93 Therapeutic_procedure:T142 +A13 POLARITY E93 NEG +T143 Therapeutic_procedure 3386 3395 electrode +E94 Therapeutic_procedure:T143 +T144 Detailed_description 3376 3385 permanent +T145 Detailed_description 3370 3375 right +R63 MODIFY Arg1:T144 Arg2:E94 +R64 MODIFY Arg1:T145 Arg2:E94 +T146 Diagnostic_procedure 3444 3469 microelectrode recordings +E95 Diagnostic_procedure:T146 +A14 POLARITY E95 NEG +T147 Medication 3477 3485 levodopa +E96 Medication:T147 +T148 Dosage 3471 3476 50 mg +R65 MODIFY Arg1:T148 Arg2:E96 +T149 Administration 3510 3526 nasogastric tube +R66 MODIFY Arg1:T149 Arg2:E96 +T150 Dosage 3527 3542 every two hours +R67 MODIFY Arg1:T150 Arg2:E96 +T151 Diagnostic_procedure 3565 3585 postoperative period +E97 Diagnostic_procedure:T151 +T152 Diagnostic_procedure 3606 3608 CT +E98 Diagnostic_procedure:T152 +T153 Biological_structure 3601 3605 head +R68 MODIFY Arg1:T153 Arg2:E98 +T154 Clinical_event 3679 3690 transferred +E99 Clinical_event:T154 +T155 Nonbiological_location 3698 3717 intensive care unit +R69 MODIFY Arg1:T155 Arg2:E99 +T156 Therapeutic_procedure 3726 3735 extubated +E100 Therapeutic_procedure:T156 +T157 Time 3739 3748 02:00 p.m +E101 Time:T157 +T158 Date 3754 3767 following day +E102 Date:T158 +T159 Sign_symptom 3780 3800 neurological deficit +E103 Sign_symptom:T159 +A15 POLARITY E103 NEG +T160 Sign_symptom 3823 3829 spasms +E104 Sign_symptom:T160 +A16 POLARITY E104 NEG +T161 Biological_structure 3813 3822 laryngeal +R70 MODIFY Arg1:T161 Arg2:E104 +T162 Therapeutic_procedure 3844 3860 nasogastric tube +E105 Therapeutic_procedure:T162 +A17 POLARITY E105 NEG +T163 Medication 3899 3909 medication +E106 Medication:T163 +T164 Therapeutic_procedure 588 595 surgery +E107 Therapeutic_procedure:T164 +T165 Medication 600 610 medication +E108 Medication:T165 +R71 SUB_PROCEDURE Arg1:E14 Arg2:E108 +R72 SUB_PROCEDURE Arg1:E15 Arg2:E108 +T166 Detailed_description 120 129 peak dose +R73 MODIFY Arg1:T166 Arg2:E19 +R74 BEFORE Arg1:E4 Arg2:E6 +R75 AFTER Arg1:E6 Arg2:E7 +* OVERLAP E7 E8 E10 E11 E12 +R76 BEFORE Arg1:E12 Arg2:E13 +R77 AFTER Arg1:E13 Arg2:E107 +* OVERLAP E107 E108 +R78 AFTER Arg1:E108 Arg2:E18 +R79 BEFORE Arg1:E18 Arg2:E24 +T167 Other_event 103 115 “off” states +E109 Other_event:T167 +* OVERLAP E2 E1 E20 E109 E19 E4 +* OVERLAP E24 E25 E26 E22 E29 E27 E31 E30 E33 E34 E37 E38 +R10 BEFORE Arg1:E38 Arg2:E39 +* OVERLAP E39 E40 E41 E42 E43 E44 E45 E46 E47 E49 E52 E53 E54 +R80 MODIFY Arg1:T63 Arg2:E44 +R81 MODIFY Arg1:T64 Arg2:E44 +T30 Date 1662 1672 day before +E110 Date:T30 +R82 BEFORE Arg1:E54 Arg2:E110 +R83 BEFORE Arg1:E110 Arg2:E55 +R84 AFTER Arg1:E55 Arg2:E56 +* OVERLAP E56 E57 +R85 BEFORE Arg1:E57 Arg2:E58 +* OVERLAP E58 E59 +R86 BEFORE Arg1:E59 Arg2:E60 +* OVERLAP E60 E61 E62 E63 E65 E66 E67 E68 E69 E70 E71 E74 E75 E76 +T168 Nonbiological_location 2075 2079 O.R. +R87 MODIFY Arg1:T168 Arg2:E65 +A18 POLARITY E76 UNCERTAIN +R88 BEFORE Arg1:E76 Arg2:E77 +* OVERLAP E77 E78 E80 +R89 BEFORE Arg1:E80 Arg2:E81 +* OVERLAP E81 E83 E82 +R90 BEFORE Arg1:E82 Arg2:E84 +* OVERLAP E84 E85 E87 E88 E89 E90 E91 E92 E93 E94 E95 +R91 BEFORE Arg1:E95 Arg2:E96 +* OVERLAP E96 E97 E98 +R92 BEFORE Arg1:E98 Arg2:E99 +R93 BEFORE Arg1:E99 Arg2:E100 +* OVERLAP E100 E101 E102 E103 E104 E105 E106 E16 +T169 Therapeutic_procedure 3956 3973 impulse generator +E111 Therapeutic_procedure:T169 +R94 BEFORE Arg1:E16 Arg2:E111 +* OVERLAP E111 E3 E112 E21 +T170 Diagnostic_procedure 4029 4044 symptom control +E112 Diagnostic_procedure:T170 +T171 Lab_value 4024 4028 good +E113 Lab_value:T171 +R95 MODIFY Arg1:E113 Arg2:E112