--- a +++ b/processing/MACCROBAT/25023062.ann @@ -0,0 +1,354 @@ +T1 Age 2 13 66-year-old +T2 Personal_background 14 23 Caucasian +T3 Sex 24 29 woman +T4 History 48 60 hypertension +T5 Sign_symptom 48 60 hypertension +E1 Sign_symptom:T5 +T6 Clinical_event 65 73 admitted +E2 Clinical_event:T6 +T7 Nonbiological_location 81 89 hospital +R1 MODIFY Arg1:T7 Arg2:E2 +T8 Disease_disorder 117 133 Burkitt lymphoma +E3 Disease_disorder:T8 +T9 Diagnostic_procedure 139 160 lactate dehydrogenase +E4 Diagnostic_procedure:T9 +T10 Qualitative_concept 171 175 high +R2 MODIFY Arg1:T10 Arg2:E4 +T11 Sign_symptom 212 216 mass +E5 Sign_symptom:T11 +T12 Biological_structure 200 211 mediastinal +R3 MODIFY Arg1:T12 Arg2:E5 +T13 Distance 221 235 more than 10cm +R4 MODIFY Arg1:T13 Arg2:E5 +T14 Diagnostic_procedure 241 261 physical examination +E6 Diagnostic_procedure:T14 +T16 Diagnostic_procedure 284 303 electrocardiography +E7 Diagnostic_procedure:T16 +T17 Diagnostic_procedure 305 308 ECG +E8 Diagnostic_procedure:T17 +R6 IDENTICAL Arg1:E8 Arg2:E7 +T18 Detailed_description 278 283 basal +R7 MODIFY Arg1:T18 Arg2:E7 +T19 Sign_symptom 317 329 sinus rhythm +E9 Sign_symptom:T19 +T20 Diagnostic_procedure 337 347 heart rate +E10 Diagnostic_procedure:T20 +T21 Lab_value 351 366 72 beats/minute +R8 MODIFY Arg1:T21 Arg2:E10 +T22 Diagnostic_procedure 368 414 Two-dimensional transthoracic echocardiography +E11 Diagnostic_procedure:T22 +T23 Diagnostic_procedure 416 419 TTE +E12 Diagnostic_procedure:T23 +R9 IDENTICAL Arg1:E12 Arg2:E11 +T24 Detailed_description 421 428 Siemens +T25 Detailed_description 430 444 Acuson Sequoia +T26 Detailed_description 446 450 C512 +R10 MODIFY Arg1:T24 Arg2:E11 +R11 MODIFY Arg1:T25 Arg2:E11 +R12 MODIFY Arg1:T26 Arg2:E11 +T27 Diagnostic_procedure 468 491 biventricular functions +E13 Diagnostic_procedure:T27 +T29 Diagnostic_procedure 500 520 LV ejection fraction +E14 Diagnostic_procedure:T29 +T30 Diagnostic_procedure 522 526 LVEF +E15 Diagnostic_procedure:T30 +R14 IDENTICAL Arg1:E15 Arg2:E14 +T31 Lab_value 531 534 60% +R15 MODIFY Arg1:T31 Arg2:E14 +T32 Sign_symptom 562 575 regurgitation +E16 Sign_symptom:T32 +T33 Biological_structure 552 561 tricuspid +T34 Biological_structure 541 547 mitral +T35 Severity 536 540 mild +R16 MODIFY Arg1:T35 Arg2:E16 +R17 MODIFY Arg1:T34 Arg2:E16 +R18 MODIFY Arg1:T33 Arg2:E16 +T36 Sign_symptom 590 610 pericardial effusion +E17 Sign_symptom:T36 +T37 Severity 581 589 moderate +R19 MODIFY Arg1:T37 Arg2:E17 +T38 Diagnostic_procedure 614 629 risk assessment +E18 Diagnostic_procedure:T38 +T39 Qualitative_concept 660 669 high-risk +R20 MODIFY Arg1:T39 Arg2:E18 +T40 Medication 697 779 rituximab-hyperfractionated-cyclophosphamide-vincristine-doxorubicin-dexamethasone +E19 Medication:T40 +T41 Medication 781 793 R-Hyper-CVAD +E20 Medication:T41 +R21 IDENTICAL Arg1:E20 Arg2:E19 +T42 Medication 795 807 chemotherapy +E21 Medication:T42 +R22 SUB_PROCEDURE Arg1:E19 Arg2:E21 +T43 Diagnostic_procedure 822 839 laboratory values +E22 Diagnostic_procedure:T43 +T44 Medication 890 906 cyclophosphamide +E23 Medication:T44 +T45 Dosage 880 889 high-dose +R23 MODIFY Arg1:T45 Arg2:E23 +T46 Dosage 907 927 300mg/m2 twice daily +T47 Duration 932 938 3 days +E24 Duration:T47 +R24 MODIFY Arg1:T46 Arg2:E23 +T48 Medication 940 951 doxorubicin +E25 Medication:T48 +T49 Dosage 952 963 25mg/m2/day +R25 MODIFY Arg1:T49 Arg2:E25 +T50 Duration 968 974 2 days +E26 Duration:T50 +T51 Medication 976 985 rituximab +E27 Medication:T51 +T52 Dosage 986 998 375mg/m2/day +R26 MODIFY Arg1:T52 Arg2:E27 +T53 Duration 1003 1008 1 day +E28 Duration:T53 +T54 Medication 1010 1023 dexamethasone +E29 Medication:T54 +T55 Dosage 1024 1032 40mg/day +R27 MODIFY Arg1:T55 Arg2:E29 +T56 Duration 1037 1043 4 days +E30 Duration:T56 +T57 Medication 1049 1060 vincristine +E31 Medication:T57 +T58 Sign_symptom 2733 2744 neutropenia +E32 Sign_symptom:T58 +T59 Disease_disorder 2749 2758 pneumonia +E33 Disease_disorder:T59 +T60 Sign_symptom 2771 2795 cardiac failure symptoms +E34 Sign_symptom:T60 +A1 POLARITY E34 NEG +T61 Medication 2808 2820 chemotherapy +E35 Medication:T61 +T62 Medication 2864 2876 chemotherapy +E36 Medication:T62 +A2 POLARITY E36 NEG +T63 Detailed_description 2846 2860 another course +R28 MODIFY Arg1:T63 Arg2:E36 +T64 Sign_symptom 2894 2903 remission +E37 Sign_symptom:T64 +T65 Medication 2621 2633 R-Hyper-CVAD +E38 Medication:T65 +T66 Medication 2634 2646 chemotherapy +E39 Medication:T66 +R29 SUB_PROCEDURE Arg1:E38 Arg2:E39 +T67 Medication 2683 2695 methotrexate +E40 Medication:T67 +T68 Medication 2700 2710 cytarabine +E41 Medication:T68 +T69 Dosage 2673 2682 high-dose +R30 MODIFY Arg1:T69 Arg2:E40 +T70 Sign_symptom 2461 2468 dyspnea +E42 Sign_symptom:T70 +A3 TREND E42 DEC +T71 Activity 2491 2501 discharged +E43 Activity:T71 +T72 Date 2505 2511 day 20 +E44 Date:T72 +T73 Date 2513 2526 After 1 month +E45 Date:T73 +T74 Diagnostic_procedure 2528 2531 TTE +E46 Diagnostic_procedure:T74 +T75 Diagnostic_procedure 2546 2569 biventricular functions +E47 Diagnostic_procedure:T75 +T77 Diagnostic_procedure 2578 2582 LVEF +E48 Diagnostic_procedure:T77 +T78 Lab_value 2586 2589 60% +R32 MODIFY Arg1:T78 Arg2:E48 +T79 Dosage 1061 1068 2mg/day +T80 Duration 1073 1079 2 days +E49 Duration:T80 +R33 MODIFY Arg1:T79 Arg2:E31 +T81 Sign_symptom 1584 1591 dyspnea +E50 Sign_symptom:T81 +T82 Date 1599 1610 seventh day +E51 Date:T82 +T83 Diagnostic_procedure 1625 1645 physical examination +E52 Diagnostic_procedure:T83 +T84 Diagnostic_procedure 2405 2409 LVEF +E53 Diagnostic_procedure:T84 +T85 Diagnostic_procedure 2391 2394 TTE +E54 Diagnostic_procedure:T85 +T86 Date 2376 2389 After 12 days +E55 Date:T86 +T87 Lab_value 2413 2416 37% +E56 Lab_value:T87 +R34 MODIFY Arg1:E56 Arg2:E53 +T88 Diagnostic_procedure 2428 2455 right ventricular functions +E57 Diagnostic_procedure:T88 +T89 Lab_value 2421 2427 normal +E58 Lab_value:T89 +R35 MODIFY Arg1:E58 Arg2:E57 +T90 Disease_disorder 2222 2233 myocarditis +E59 Disease_disorder:T90 +A4 POLARITY E59 UNCERTAIN +T91 Disease_disorder 2193 2220 Drug-induced cardiotoxicity +E60 Disease_disorder:T91 +A5 POLARITY E60 UNCERTAIN +T92 Medication 2938 2950 chemotherapy +E61 Medication:T92 +T93 Medication 1109 1125 cyclophosphamide +E62 Medication:T93 +T94 Medication 1130 1141 doxorubicin +E63 Medication:T94 +T95 Dosage 1155 1164 1800mg/m2 +T96 Dosage 1169 1176 50mg/m2 +R36 MODIFY Arg1:T95 Arg2:E62 +R37 MODIFY Arg1:T96 Arg2:E63 +T97 Medication 1206 1217 allopurinol +E64 Medication:T97 +T98 Dosage 1218 1227 300mg/day +T99 Administration 1228 1237 perorally +R38 MODIFY Arg1:T98 Arg2:E64 +R39 MODIFY Arg1:T99 Arg2:E64 +T100 Medication 1239 1257 sodium bicarbonate +E65 Medication:T100 +T101 Dosage 1259 1263 8.4% +T102 Dosage 1265 1278 10 flacon/day +R40 MODIFY Arg1:T101 Arg2:E65 +R41 MODIFY Arg1:T102 Arg2:E65 +T103 Medication 1309 1321 chemotherapy +E66 Medication:T103 +T104 Administration 1280 1288 infusion +R42 MODIFY Arg1:T104 Arg2:E65 +T105 Duration 1293 1308 24 hours before +E67 Duration:T105 +T106 Medication 1327 1332 mesna +E68 Medication:T106 +T107 Dosage 1333 1345 600mg/m2/day +R43 MODIFY Arg1:T107 Arg2:E68 +T108 Duration 1350 1356 2 days +E69 Duration:T108 +T109 Disease_disorder 1380 1400 tumor lysis syndrome +E70 Disease_disorder:T109 +A6 POLARITY E70 UNCERTAIN +T110 Disease_disorder 1405 1425 hemorrhagic cystitis +E71 Disease_disorder:T110 +A7 POLARITY E71 UNCERTAIN +T111 Therapeutic_procedure 1360 1371 prophylaxis +E72 Therapeutic_procedure:T111 +T112 Medication 1459 1470 granisetron +E73 Medication:T112 +T113 Dosage 1471 1478 2mg/day +R44 MODIFY Arg1:T113 Arg2:E73 +T114 Medication 1483 1495 lansoprazole +E74 Medication:T114 +R45 SUB_PROCEDURE Arg1:E68 Arg2:E72 +T115 Dosage 1496 1504 30mg/day +R46 MODIFY Arg1:T115 Arg2:E74 +T116 Therapeutic_procedure 1535 1546 prophylaxis +E75 Therapeutic_procedure:T116 +T117 Biological_structure 1527 1534 gastric +T118 Detailed_description 1508 1522 antiemetogenic +R47 MODIFY Arg1:T117 Arg2:E75 +R48 MODIFY Arg1:T118 Arg2:E75 +R49 SUB_PROCEDURE Arg1:E73 Arg2:E75 +R50 SUB_PROCEDURE Arg1:E74 Arg2:E75 +T119 Diagnostic_procedure 1655 1669 blood pressure +E76 Diagnostic_procedure:T119 +T120 Lab_value 1673 1683 100/60mmHg +E77 Lab_value:T120 +T121 Diagnostic_procedure 1690 1700 heart rate +E78 Diagnostic_procedure:T121 +T122 Lab_value 1704 1720 110 beats/minute +E79 Lab_value:T122 +R51 MODIFY Arg1:E77 Arg2:E76 +R52 MODIFY Arg1:E79 Arg2:E78 +T123 Diagnostic_procedure 1731 1743 auscultation +E80 Diagnostic_procedure:T123 +T124 Biological_structure 1725 1730 chest +R53 MODIFY Arg1:T124 Arg2:E80 +T125 Sign_symptom 1797 1817 inspiratory crackles +E81 Sign_symptom:T125 +T126 Sign_symptom 1748 1766 inspiratory sounds +E82 Sign_symptom:T126 +A8 POLARITY E82 NEG +T127 Biological_structure 1781 1792 lower zones +R54 MODIFY Arg1:T127 Arg2:E82 +T128 Biological_structure 1832 1844 middle zones +R55 MODIFY Arg1:T128 Arg2:E81 +T129 Sign_symptom 1874 1876 S3 +E83 Sign_symptom:T129 +A9 POLARITY E83 NEG +#1 AnnotatorNotes E83 S3 gallop +T130 Sign_symptom 1854 1869 cardiac murmurs +E84 Sign_symptom:T130 +A10 POLARITY E84 NEG +T131 Diagnostic_procedure 1892 1895 ECG +E85 Diagnostic_procedure:T131 +T132 Lab_value 1903 1914 low voltage +E86 Lab_value:T132 +T133 Diagnostic_procedure 1922 1947 limb and precordial leads +E87 Diagnostic_procedure:T133 +R56 SUB_PROCEDURE Arg1:E87 Arg2:E85 +R57 MODIFY Arg1:E86 Arg2:E87 +T134 Diagnostic_procedure 1949 1952 TTE +E88 Diagnostic_procedure:T134 +T135 Diagnostic_procedure 1991 2003 echogenicity +E89 Diagnostic_procedure:T135 +T136 Biological_structure 1980 1990 myocardial +T137 Lab_value 1960 1979 diffusely increased +E90 Lab_value:T137 +R58 MODIFY Arg1:E90 Arg2:E89 +R59 MODIFY Arg1:T136 Arg2:E89 +T138 Sign_symptom 2010 2030 pericardial effusion +E91 Sign_symptom:T138 +T139 Severity 2005 2009 mild +R60 MODIFY Arg1:T139 Arg2:E91 +T140 Diagnostic_procedure 2069 2087 systolic functions +E92 Diagnostic_procedure:T140 +T141 Detailed_description 2055 2068 biventricular +T142 Lab_value 2036 2054 generally impaired +E93 Lab_value:T142 +R61 MODIFY Arg1:E93 Arg2:E92 +R62 MODIFY Arg1:T141 Arg2:E92 +T143 Diagnostic_procedure 2096 2100 LVEF +E94 Diagnostic_procedure:T143 +T144 Lab_value 2101 2104 31% +E95 Lab_value:T144 +T145 Sign_symptom 2138 2146 akinesis +E96 Sign_symptom:T145 +T146 Biological_structure 2109 2126 right ventricular +T147 Detailed_description 2127 2137 mid-apical +R63 MODIFY Arg1:T147 Arg2:E96 +R64 MODIFY Arg1:T146 Arg2:E96 +R65 MODIFY Arg1:E95 Arg2:E94 +T148 Sign_symptom 2157 2173 pleural effusion +E97 Sign_symptom:T148 +T149 Detailed_description 2148 2156 Manifest +R66 MODIFY Arg1:T149 Arg2:E97 +T150 Medication 2250 2260 Furosemide +E98 Medication:T150 +T151 Medication 2265 2273 ramipril +E99 Medication:T151 +T152 Medication 2292 2304 beta-blocker +E100 Medication:T152 +A11 TREND E100 STAY +T153 Sign_symptom 2348 2360 hypertension +E101 Sign_symptom:T153 +R67 BEFORE Arg1:E1 Arg2:E2 +* OVERLAP E2 E3 E4 E5 E6 E7 E9 E10 E11 E13 E14 E16 E17 E18 +T15 Lab_value 266 272 normal +E102 Lab_value:T15 +R5 MODIFY Arg1:E102 Arg2:E6 +T28 Lab_value 461 467 normal +E103 Lab_value:T28 +R13 MODIFY Arg1:E103 Arg2:E13 +R68 BEFORE Arg1:E18 Arg2:E19 +* OVERLAP E19 E22 E23 E24 E25 E26 E27 E28 E29 E30 E31 E49 E62 E63 E64 E65 E67 E66 E69 E72 E70 E71 E75 +R69 BEFORE Arg1:E75 Arg2:E50 +* OVERLAP E50 E51 E52 E76 E78 E80 E82 E81 E84 E83 E85 E88 E89 E91 E92 E94 E96 E97 E60 E59 +R70 BEFORE Arg1:E59 Arg2:E98 +* OVERLAP E98 E99 E100 E101 +R71 BEFORE Arg1:E101 Arg2:E55 +* OVERLAP E55 E54 E53 E57 E42 +R72 BEFORE Arg1:E42 Arg2:E43 +* OVERLAP E43 E44 +R73 BEFORE Arg1:E44 Arg2:E45 +* OVERLAP E45 E46 E47 E48 E38 +T76 Lab_value 2539 2545 normal +E104 Lab_value:T76 +R31 MODIFY Arg1:E104 Arg2:E47 +R74 BEFORE Arg1:E38 Arg2:E40 +* OVERLAP E40 E41 E32 E33 E34 E35 +R75 BEFORE Arg1:E35 Arg2:E36 +R76 BEFORE Arg1:E36 Arg2:E37 +R77 AFTER Arg1:E37 Arg2:E61