--- a +++ b/processing/MACCROBAT/23076693.ann @@ -0,0 +1,306 @@ +T1 Age 2 13 45-year-old +T2 Sex 14 18 lady +T3 Clinical_event 26 50 dermatology consultation +E1 Clinical_event:T3 +T5 Texture 55 70 severely tender +T4 Detailed_description 71 83 erythematous +T6 Sign_symptom 84 92 vesicles +E2 Sign_symptom:T6 +T7 Sign_symptom 97 103 bullae +E3 Sign_symptom:T7 +T8 Biological_structure 109 113 back +T9 Biological_structure 115 120 chest +T10 Biological_structure 125 129 arms +R1 MODIFY Arg1:T5 Arg2:E2 +R2 MODIFY Arg1:T4 Arg2:E2 +R3 MODIFY Arg1:T5 Arg2:E3 +R4 MODIFY Arg1:T4 Arg2:E3 +R5 MODIFY Arg1:T8 Arg2:E3 +R6 MODIFY Arg1:T9 Arg2:E3 +R7 MODIFY Arg1:T10 Arg2:E3 +R8 MODIFY Arg1:T8 Arg2:E2 +R9 MODIFY Arg1:T9 Arg2:E2 +R10 MODIFY Arg1:T10 Arg2:E2 +T11 Detailed_description 142 157 sudden in onset +R11 MODIFY Arg1:T11 Arg2:E2 +R12 MODIFY Arg1:T11 Arg2:E3 +T12 Coreference 131 136 These +E4 Coreference:T12 +R13 IDENTICAL Arg1:E4 Arg2:E2 +R14 IDENTICAL Arg1:E4 Arg2:E3 +T13 Sign_symptom 174 179 fever +E5 Sign_symptom:T13 +T14 Sign_symptom 181 187 nausea +E6 Sign_symptom:T14 +T15 Sign_symptom 192 199 malaise +E7 Sign_symptom:T15 +T16 Sign_symptom 240 244 pain +E8 Sign_symptom:T16 +T17 Biological_structure 248 261 upper abdomen +R15 MODIFY Arg1:T17 Arg2:E8 +T18 History 273 336 no history of receiving any drugs prior to the onset of lesions +T19 Medication 301 306 drugs +E9 Medication:T19 +A1 POLARITY E9 NEG +T20 Time 307 336 prior to the onset of lesions +E10 Time:T20 +T21 Sign_symptom 373 384 weight loss +E11 Sign_symptom:T21 +A2 POLARITY E11 NEG +T22 Detailed_description 361 372 significant +R16 MODIFY Arg1:T22 Arg2:E11 +T23 Sign_symptom 388 404 loss of appetite +E12 Sign_symptom:T23 +A3 POLARITY E12 NEG +T24 Diagnostic_procedure 409 429 physical examination +E13 Diagnostic_procedure:T24 +T25 Diagnostic_procedure 435 446 temperature +E14 Diagnostic_procedure:T25 +T26 Lab_value 451 455 38°C +T27 Diagnostic_procedure 457 467 pulse rate +E15 Diagnostic_procedure:T27 +T28 Lab_value 472 479 100/min +T29 Diagnostic_procedure 484 498 blood pressure +E16 Diagnostic_procedure:T29 +T30 Lab_value 503 515 126/72 mm Hg +T31 Lab_value 528 536 multiple +T32 Detailed_description 537 547 coalescing +T33 Coreference 548 556 vesicles +E17 Coreference:T33 +T34 Coreference 561 567 bullae +E18 Coreference:T34 +T35 Biological_structure 573 583 upper back +T36 Biological_structure 585 590 chest +T37 Biological_structure 595 599 arms +T38 Sign_symptom 643 654 pustulation +E19 Sign_symptom:T38 +T39 Sign_symptom 659 667 necrosis +E20 Sign_symptom:T39 +T40 Detailed_description 600 625 distributed symmetrically +R17 IDENTICAL Arg1:E17 Arg2:E2 +R18 IDENTICAL Arg1:E18 Arg2:E3 +R19 MODIFY Arg1:T32 Arg2:E17 +R20 MODIFY Arg1:T32 Arg2:E18 +R21 MODIFY Arg1:T31 Arg2:E17 +R22 MODIFY Arg1:T31 Arg2:E18 +R23 MODIFY Arg1:T35 Arg2:E17 +R24 MODIFY Arg1:T36 Arg2:E17 +R25 MODIFY Arg1:T37 Arg2:E17 +R26 MODIFY Arg1:T40 Arg2:E17 +R27 MODIFY Arg1:E19 Arg2:E17 +R28 MODIFY Arg1:E20 Arg2:E17 +R29 MODIFY Arg1:T35 Arg2:E18 +R30 MODIFY Arg1:T36 Arg2:E18 +R31 MODIFY Arg1:T37 Arg2:E18 +R32 MODIFY Arg1:T40 Arg2:E18 +R33 MODIFY Arg1:E19 Arg2:E18 +R34 MODIFY Arg1:E20 Arg2:E18 +T41 Lab_value 691 699 multiple +T42 Detailed_description 700 715 pseudovesicular +T43 Detailed_description 716 725 satellite +T44 Sign_symptom 726 732 papule +E21 Sign_symptom:T44 +R35 MODIFY Arg1:T43 Arg2:E21 +R36 MODIFY Arg1:T42 Arg2:E21 +R37 MODIFY Arg1:T41 Arg2:E21 +T45 Coreference 681 685 them +E22 Coreference:T45 +R38 IDENTICAL Arg1:E22 Arg2:E17 +R39 IDENTICAL Arg1:E22 Arg2:E18 +T46 Other_entity 669 680 Surrounding +#1 AnnotatorNotes T46 again, verb?? +T47 Diagnostic_procedure 755 776 abdominal examination +E23 Diagnostic_procedure:T47 +T48 Severity 777 781 mild +T49 Sign_symptom 782 792 tenderness +E24 Sign_symptom:T49 +T50 Biological_structure 812 831 right hypochondrium +R40 MODIFY Arg1:T48 Arg2:E24 +R41 MODIFY Arg1:T50 Arg2:E24 +T51 Diagnostic_procedure 851 876 laboratory investigations +E25 Diagnostic_procedure:T51 +T52 Diagnostic_procedure 886 907 total leucocyte count +E26 Diagnostic_procedure:T52 +T53 Lab_value 911 927 12 000 cells/mm3 +R42 SUB_PROCEDURE Arg1:E26 Arg2:E25 +T54 Lab_value 933 948 75% neutrophils +R43 MODIFY Arg1:T53 Arg2:E26 +R44 MODIFY Arg1:T54 Arg2:E26 +T55 Diagnostic_procedure 954 965 haemoglobin +E27 Diagnostic_procedure:T55 +T56 Lab_value 976 984 14.3 gm% +T57 Diagnostic_procedure 989 1019 erythrocyte sedimentation rate +E28 Diagnostic_procedure:T57 +T58 Lab_value 1024 1031 30 mm/h +R45 MODIFY Arg1:T56 Arg2:E27 +R46 MODIFY Arg1:T58 Arg2:E28 +R47 SUB_PROCEDURE Arg1:E27 Arg2:E25 +R48 SUB_PROCEDURE Arg1:E28 Arg2:E25 +T59 Diagnostic_procedure 1033 1052 Liver function test +E29 Diagnostic_procedure:T59 +T60 Diagnostic_procedure 1054 1074 kidney function test +E30 Diagnostic_procedure:T60 +T61 Diagnostic_procedure 1079 1097 C reactive protein +E31 Diagnostic_procedure:T61 +T62 Lab_value 1117 1123 normal +R49 MODIFY Arg1:T62 Arg2:E31 +R50 MODIFY Arg1:T62 Arg2:E30 +R51 MODIFY Arg1:T62 Arg2:E29 +R52 SUB_PROCEDURE Arg1:E29 Arg2:E25 +R53 SUB_PROCEDURE Arg1:E30 Arg2:E25 +R54 SUB_PROCEDURE Arg1:E31 Arg2:E25 +T63 Diagnostic_procedure 1132 1142 Gram stain +E32 Diagnostic_procedure:T63 +T64 Diagnostic_procedure 1148 1165 purulent exudates +E33 Diagnostic_procedure:T64 +T65 Diagnostic_procedure 1216 1223 culture +E34 Diagnostic_procedure:T65 +R55 SUB_PROCEDURE Arg1:E32 Arg2:E33 +R56 SUB_PROCEDURE Arg1:E34 Arg2:E33 +T66 Duration 1254 1272 72 h of incubation +E35 Duration:T66 +R57 MODIFY Arg1:E35 Arg2:E34 +T67 Sign_symptom 1241 1247 growth +E36 Sign_symptom:T67 +A4 POLARITY E36 NEG +T68 Biological_structure 1178 1189 neutrophils +T69 Sign_symptom 1202 1211 organisms +E37 Sign_symptom:T69 +A5 POLARITY E37 NEG +R58 MODIFY Arg1:T68 Arg2:E32 +R59 MODIFY Arg1:E37 Arg2:E32 +R60 MODIFY Arg1:E36 Arg2:E34 +T70 Detailed_description 1276 1284 lesional +T71 Biological_structure 1285 1289 skin +T72 Diagnostic_procedure 1290 1296 biopsy +E38 Diagnostic_procedure:T72 +T73 Detailed_description 1312 1321 satellite +T74 Coreference 1322 1328 papule +E39 Coreference:T74 +R61 MODIFY Arg1:T70 Arg2:E38 +R62 MODIFY Arg1:T71 Arg2:E38 +R63 MODIFY Arg1:T73 Arg2:E39 +R64 IDENTICAL Arg1:E39 Arg2:E21 +T75 Sign_symptom 1336 1361 neutrophilic infiltration +E40 Sign_symptom:T75 +T76 Biological_structure 1365 1371 dermis +R65 MODIFY Arg1:T76 Arg2:E40 +T77 Sign_symptom 1377 1400 papillary dermal oedema +E41 Sign_symptom:T77 +T78 Sign_symptom 1405 1415 spongiosis +E42 Sign_symptom:T78 +R66 MODIFY Arg1:E39 Arg2:E38 +T79 Diagnostic_procedure 1441 1456 ultrasonography +E43 Diagnostic_procedure:T79 +T80 Biological_structure 1431 1440 Abdominal +T81 Sign_symptom 1492 1496 mass +E44 Sign_symptom:T81 +T82 Biological_structure 1479 1491 gall bladder +T83 Detailed_description 1466 1478 intraluminal +R67 MODIFY Arg1:T83 Arg2:E44 +R68 MODIFY Arg1:T82 Arg2:E44 +T84 Sign_symptom 1511 1521 malignancy +E45 Sign_symptom:T84 +A6 POLARITY E45 UNCERTAIN +R69 MODIFY Arg1:E45 Arg2:E44 +T85 Disease_disorder 1575 1577 SS +E46 Disease_disorder:T85 +T86 Coreference 1594 1606 gall bladder +E47 Coreference:T86 +R70 IDENTICAL Arg1:E47 Arg2:T82 +T87 Coreference 1607 1617 malignancy +E48 Coreference:T87 +R71 IDENTICAL Arg1:E48 Arg2:E45 +T88 Medication 1652 1664 prednisolone +E49 Medication:T88 +T89 Administration 1647 1651 oral +T90 Dosage 1676 1681 40 mg +T91 Frequency 1682 1687 daily +T92 Detailed_description 1699 1710 symptomatic +T93 Medication 1711 1720 treatment +E50 Medication:T93 +R72 MODIFY Arg1:T92 Arg2:E50 +R73 MODIFY Arg1:T89 Arg2:E49 +R74 MODIFY Arg1:T90 Arg2:E49 +R75 MODIFY Arg1:T91 Arg2:E49 +T94 Detailed_description 1726 1735 cutaneous +T95 Sign_symptom 1736 1743 lesions +E51 Sign_symptom:T95 +T96 Duration 1797 1803 1 week +E52 Duration:T96 +T97 Medication 1807 1816 treatment +E53 Medication:T97 +T98 Detailed_description 1771 1790 subsided completely +R76 MODIFY Arg1:T98 Arg2:E51 +R77 MODIFY Arg1:T94 Arg2:E51 +T99 Coreference 1840 1852 prednisolone +E54 Coreference:T99 +R78 IDENTICAL Arg1:E54 Arg2:E49 +T101 Therapeutic_procedure 1877 1892 cholecystectomy +E55 Therapeutic_procedure:T101 +T102 Detailed_description 1872 1876 open +R79 MODIFY Arg1:T102 Arg2:E55 +T103 Diagnostic_procedure 1908 1922 Histopathology +E56 Diagnostic_procedure:T103 +T104 Biological_structure 1926 1940 excised tissue +T105 Detailed_description 1960 1979 well-differentiated +T106 Biological_structure 1980 1992 gall bladder +T107 Disease_disorder 1993 2007 adenocarcinoma +E57 Disease_disorder:T107 +T108 Biological_structure 2087 2110 Cystic duct cut margins +T109 Sign_symptom 2124 2130 tumour +E58 Sign_symptom:T109 +A7 POLARITY E58 NEG +R80 MODIFY Arg1:T104 Arg2:E56 +R81 MODIFY Arg1:T105 Arg2:E57 +R82 MODIFY Arg1:T106 Arg2:E57 +R83 MODIFY Arg1:T108 Arg2:E58 +T110 Biological_structure 2016 2022 glands +T111 Biological_structure 2027 2035 papillae +T112 Sign_symptom 2036 2048 infiltrating +E59 Sign_symptom:T112 +T113 Biological_structure 2053 2071 muscularis propria +T114 Detailed_description 2072 2085 superficially +R85 MODIFY Arg1:T111 Arg2:E59 +R86 MODIFY Arg1:T110 Arg2:E59 +R87 MODIFY Arg1:T113 Arg2:E59 +R88 MODIFY Arg1:T114 Arg2:E59 +T115 Sign_symptom 2016 2085 glands and papillae infiltrating the muscularis propria superficially +E60 Sign_symptom:T115 +T116 Dosage 2218 2232 tapering doses +T117 Coreference 2236 2248 prednisolone +E61 Coreference:T117 +R89 IDENTICAL Arg1:E61 Arg2:E49 +T118 Clinical_event 2204 2214 discharged +E62 Clinical_event:T118 +T119 Duration 2156 2176 postoperative period +E63 Duration:T119 +T120 Sign_symptom 2181 2191 uneventful +E64 Sign_symptom:T120 +A8 POLARITY E64 NEG +* OVERLAP E1 E2 E3 E5 E6 E7 E8 +R90 AFTER Arg1:E8 Arg2:E9 +R91 MODIFY Arg1:E10 Arg2:E9 +R92 BEFORE Arg1:E9 Arg2:E11 +* OVERLAP E11 E12 +R93 BEFORE Arg1:E12 Arg2:E13 +R94 MODIFY Arg1:T26 Arg2:E14 +R95 MODIFY Arg1:T28 Arg2:E15 +R96 MODIFY Arg1:T30 Arg2:E16 +* OVERLAP E13 E14 E15 E16 E17 E18 E21 E23 E24 E25 E33 E38 E40 E41 E42 E43 E44 E46 +R97 MODIFY Arg1:T80 Arg2:E43 +R98 BEFORE Arg1:E46 Arg2:E49 +* OVERLAP E49 E50 +R99 BEFORE Arg1:E50 Arg2:E51 +R100 MODIFY Arg1:E52 Arg2:E53 +* OVERLAP E51 E53 E65 +T100 Clinical_event 1857 1864 tapered +E65 Clinical_event:T100 +R84 BEFORE Arg1:E65 Arg2:E55 +R101 BEFORE Arg1:E55 Arg2:E56 +* OVERLAP E56 E57 E59 E58 +R102 BEFORE Arg1:E58 Arg2:E63 +* OVERLAP E63 E64 +R103 BEFORE Arg1:E64 Arg2:E62 +R104 MODIFY Arg1:T116 Arg2:E61 +* OVERLAP E62 E61