--- a +++ b/processing/MACCROBAT/18561524.ann @@ -0,0 +1,430 @@ +T1 Age 3 14 18-year-old +T2 Sex 15 19 male +T3 Disease_disorder 39 79 attention-deficit hyperactivity disorder +E1 Disease_disorder:T3 +T4 Disease_disorder 81 85 ADHD +E2 Disease_disorder:T4 +T5 Date 90 94 2005 +E3 Date:T5 +T6 Diagnostic_procedure 121 136 body mass index +E4 Diagnostic_procedure:T6 +T7 Diagnostic_procedure 138 141 BMI +E5 Diagnostic_procedure:T7 +T8 Lab_value 146 148 40 +R2 MODIFY Arg1:T8 Arg2:E4 +T9 History 103 113 overweight +T10 Sign_symptom 103 113 overweight +E6 Sign_symptom:T10 +T11 Medication 168 187 quetiapine fumarate +E7 Medication:T11 +T12 Medication 188 199 (Seroquel®) +E8 Medication:T12 +T13 Dosage 200 212 900 mg daily +T14 Date 216 226 April 2005 +E9 Date:T14 +T15 Medication 231 246 methylphenidate +E10 Medication:T15 +T16 Medication 247 258 (Concerta®) +E11 Medication:T16 +T17 Dosage 259 270 54 mg daily +T18 Date 274 288 September 2005 +E12 Date:T18 +T19 Date 297 321 beginning of August 2006 +E13 Date:T19 +T20 Clinical_event 329 337 admitted +E14 Clinical_event:T20 +T21 Nonbiological_location 345 359 local hospital +T22 Severity 365 371 severe +T23 Sign_symptom 372 380 dyspnoea +E15 Sign_symptom:T23 +T24 Sign_symptom 382 391 tachypnea +E16 Sign_symptom:T24 +T25 Sign_symptom 393 404 tachycardia +E17 Sign_symptom:T25 +T26 Sign_symptom 410 418 cyanosis +E18 Sign_symptom:T26 +T27 Clinical_event 423 432 admission +E19 Clinical_event:T27 +T28 Diagnostic_procedure 437 451 blood pressure +E20 Diagnostic_procedure:T28 +T29 Lab_value 456 467 120/80 mmHg +T30 Diagnostic_procedure 477 495 arterial blood gas +E21 Diagnostic_procedure:T30 +T31 Diagnostic_procedure 507 509 pH +E22 Diagnostic_procedure:T31 +T32 Lab_value 513 517 7.45 +T33 Diagnostic_procedure 519 523 pCO2 +E23 Diagnostic_procedure:T33 +T34 Diagnostic_procedure 537 541 paO2 +E24 Diagnostic_procedure:T34 +T35 Diagnostic_procedure 559 561 BE +E25 Diagnostic_procedure:T35 +T36 Lab_value 527 535 3.55 kPa +T37 Lab_value 545 553 7.76 kPa +T38 Lab_value 565 576 −5.1 mmol/l +R3 MODIFY Arg1:T32 Arg2:E22 +R4 MODIFY Arg1:T36 Arg2:E23 +R5 MODIFY Arg1:T37 Arg2:E24 +R6 MODIFY Arg1:T38 Arg2:E25 +R7 SUB_PROCEDURE Arg1:E22 Arg2:E21 +R8 SUB_PROCEDURE Arg1:E23 Arg2:E21 +R9 SUB_PROCEDURE Arg1:E24 Arg2:E21 +R10 SUB_PROCEDURE Arg1:E25 Arg2:E21 +T39 Diagnostic_procedure 578 596 C-reactive protein +E26 Diagnostic_procedure:T39 +T40 Lab_value 601 613 not elevated +R11 MODIFY Arg1:T40 Arg2:E26 +T41 Biological_structure 619 624 chest +T42 Diagnostic_procedure 625 630 X-ray +E27 Diagnostic_procedure:T42 +R12 MODIFY Arg1:T41 Arg2:E27 +T45 Sign_symptom 641 655 enlarged heart +E28 Sign_symptom:T45 +R13 MODIFY Arg1:E28 Arg2:E27 +T43 Sign_symptom 670 680 hemoptysis +E29 Sign_symptom:T43 +T44 Medication 717 724 heparin +E30 Medication:T44 +T46 Detailed_description 702 716 unfractionated +R14 MODIFY Arg1:T46 Arg2:E30 +T47 Biological_structure 741 750 pulmonary +T48 Sign_symptom 751 759 embolism +E31 Sign_symptom:T48 +R15 MODIFY Arg1:T47 Arg2:E31 +A1 POLARITY E31 UNCERTAIN +T49 Disease_disorder 787 804 cardiogenic shock +E32 Disease_disorder:T49 +T50 Medication 826 842 vasoactive drugs +E33 Medication:T50 +T51 Sign_symptom 880 888 oliguric +E34 Sign_symptom:T51 +T52 Diagnostic_procedure 897 910 liver enzymes +E35 Diagnostic_procedure:T52 +T53 Lab_value 916 922 rising +R16 MODIFY Arg1:T53 Arg2:E35 +T54 Clinical_event 931 939 referred +E36 Clinical_event:T54 +T55 Nonbiological_location 947 955 hospital +T56 Clinical_event 982 991 admission +E37 Clinical_event:T56 +T57 Diagnostic_procedure 996 1010 blood pressure +E38 Diagnostic_procedure:T57 +T58 Lab_value 1015 1025 90/60 mmHg +T59 Medication 1049 1062 noradrenaline +E39 Medication:T59 +T60 Administration 1035 1043 infusion +R17 MODIFY Arg1:T60 Arg2:E39 +T61 Diagnostic_procedure 1068 1078 heart rate +E40 Diagnostic_procedure:T61 +T62 Lab_value 1083 1093 130/minute +T63 Diagnostic_procedure 1102 1113 temperature +E41 Diagnostic_procedure:T63 +T64 Lab_value 1118 1125 38.4 °C +T65 Diagnostic_procedure 1138 1162 computed tomography scan +E42 Diagnostic_procedure:T65 +T66 Biological_structure 1129 1137 thoracic +R18 MODIFY Arg1:T66 Arg2:E42 +T67 Sign_symptom 1163 1194 did not show pulmonary embolism +E43 Sign_symptom:T67 +A2 POLARITY E43 NEG +R19 MODIFY Arg1:E43 Arg2:E42 +T68 Diagnostic_procedure 1196 1212 Echocardiography +E44 Diagnostic_procedure:T68 +T69 Sign_symptom 1222 1243 biventricular failure +E45 Sign_symptom:T69 +T70 Distance 1292 1296 7 cm +T71 Diagnostic_procedure 1248 1287 left ventricular end diastolic diameter +E46 Diagnostic_procedure:T71 +R20 MODIFY Arg1:T70 Arg2:E46 +T72 Biological_structure 1302 1316 left ventricle +T73 Lab_value 1330 1341 hypokinetic +R21 MODIFY Arg1:T73 Arg2:T72 +T74 Severity 1321 1329 severely +R22 MODIFY Arg1:T74 Arg2:T73 +T75 Diagnostic_procedure 1350 1367 ejection fraction +E47 Diagnostic_procedure:T75 +T76 Diagnostic_procedure 1369 1371 EF +E48 Diagnostic_procedure:T76 +T77 Lab_value 1376 1383 20%–25% +T78 Diagnostic_procedure 1389 1428 left ventricular end diastolic pressure +E49 Diagnostic_procedure:T78 +T79 Lab_value 1442 1450 elevated +R23 MODIFY Arg1:T79 Arg2:E49 +T80 Sign_symptom 1477 1497 mitral regurgitation +E50 Sign_symptom:T80 +T81 Lab_value 1468 1476 moderate +R24 MODIFY Arg1:T81 Arg2:E50 +T82 Therapeutic_procedure 1512 1524 hemodialysis +E51 Therapeutic_procedure:T82 +T83 Detailed_description 1499 1511 Intermittent +R25 MODIFY Arg1:T83 Arg2:E51 +T84 Diagnostic_procedure 1544 1558 liver function +E52 Diagnostic_procedure:T84 +T85 Coreference 1590 1598 dialysis +E53 Coreference:T85 +R26 IDENTICAL Arg1:E53 Arg2:E51 +T86 Diagnostic_procedure 1603 1617 renal function +E54 Diagnostic_procedure:T86 +T87 Lab_value 1618 1630 deteriorated +R27 MODIFY Arg1:T87 Arg2:E54 +T88 Lab_value 1559 1567 improved +R28 MODIFY Arg1:T88 Arg2:E52 +T89 Severity 1568 1576 slightly +R29 MODIFY Arg1:T89 Arg2:T88 +T90 Diagnostic_procedure 1647 1664 creatinine values +E55 Diagnostic_procedure:T90 +R30 SUB_PROCEDURE Arg1:E55 Arg2:E54 +T91 Lab_value 1636 1646 increasing +R31 MODIFY Arg1:T91 Arg2:E55 +T92 Date 1666 1682 After three days +E56 Date:T92 +T93 Diagnostic_procedure 1720 1754 left ventricular systolic function +E57 Diagnostic_procedure:T93 +T94 Lab_value 1703 1712 worsening +R32 MODIFY Arg1:T94 Arg2:E57 +T95 Diagnostic_procedure 1763 1780 ejection fraction +E58 Diagnostic_procedure:T95 +T96 Lab_value 1784 1791 10%–12% +R33 MODIFY Arg1:T96 Arg2:E58 +T97 Sign_symptom 1803 1825 pulmonary hypertension +E59 Sign_symptom:T97 +T98 Diagnostic_procedure 1831 1858 systolic pulmonary pressure +E60 Diagnostic_procedure:T98 +T99 Lab_value 1872 1879 30 mmHg +R34 MODIFY Arg1:T99 Arg2:E60 +T100 Disease_disorder 1920 1934 cardiomyopathy +E61 Disease_disorder:T100 +T101 Detailed_description 1912 1919 dilated +R35 MODIFY Arg1:T101 Arg2:E61 +T102 Sign_symptom 1940 1958 low output failure +E62 Sign_symptom:T102 +T103 Sign_symptom 1983 1990 failure +E63 Sign_symptom:T103 +T104 Biological_structure 1977 1982 liver +R36 MODIFY Arg1:T104 Arg2:E63 +T105 Biological_structure 1967 1972 renal +R37 MODIFY Arg1:T105 Arg2:E63 +R38 CAUSE Arg1:E62 Arg2:E63 +T106 Coreference 2018 2032 cardiomyopathy +E64 Coreference:T106 +R39 IDENTICAL Arg1:E64 Arg2:E61 +T107 Detailed_description 2005 2017 drug-induced +R40 MODIFY Arg1:T107 Arg2:E64 +T108 Medication 2037 2052 methylphenidate +E65 Medication:T108 +T109 Medication 2057 2076 quetiapine fumarate +E66 Medication:T109 +A3 POLARITY E66 NEG +A4 POLARITY E65 NEG +T110 Diagnostic_procedure 2096 2130 Screening for infectious pathogens +E67 Diagnostic_procedure:T110 +T111 Diagnostic_procedure 2132 2153 immunological markers +E68 Diagnostic_procedure:T111 +T112 Diagnostic_procedure 2159 2163 iron +E69 Diagnostic_procedure:T112 +T113 Diagnostic_procedure 2167 2185 amyloid deposition +E70 Diagnostic_procedure:T113 +T114 Lab_value 2195 2203 negative +R41 MODIFY Arg1:T114 Arg2:E70 +R42 MODIFY Arg1:T114 Arg2:E69 +R43 MODIFY Arg1:T114 Arg2:E68 +R44 MODIFY Arg1:T114 Arg2:E67 +T115 Nonbiological_location 2248 2288 National Hospital (Rikshospitalet, Oslo) +T116 Medication 2302 2315 noradrenaline +E71 Medication:T116 +T117 Medication 2320 2330 dobutamine +E72 Medication:T117 +T118 Administration 2331 2340 infusions +R45 MODIFY Arg1:T118 Arg2:E72 +R46 MODIFY Arg1:T118 Arg2:E71 +T119 Therapeutic_procedure 2369 2393 intraaortic balloon pump +E73 Therapeutic_procedure:T119 +T120 Therapeutic_procedure 2395 2399 IABP +E74 Therapeutic_procedure:T120 +T121 Clinical_event 2356 2365 admission +E75 Clinical_event:T121 +T122 Coreference 2418 2431 noradrenaline +E76 Coreference:T122 +R47 IDENTICAL Arg1:E76 Arg2:E71 +T123 Medication 2448 2461 nitroprusside +E77 Medication:T123 +T124 Diagnostic_procedure 2463 2483 Coronary angiography +E78 Diagnostic_procedure:T124 +T125 Lab_value 2488 2494 normal +R48 MODIFY Arg1:T125 Arg2:E78 +T126 Diagnostic_procedure 2511 2517 biopsy +E79 Diagnostic_procedure:T126 +T127 Biological_structure 2496 2510 Endomyocardial +R49 MODIFY Arg1:T127 Arg2:E79 +T128 Biological_structure 2527 2542 right ventricle +R50 MODIFY Arg1:T128 Arg2:E79 +T129 Disease_disorder 2571 2591 myocardial pathology +E80 Disease_disorder:T129 +A5 POLARITY E80 MAYBE_NEG +R51 MODIFY Arg1:E80 Arg2:E79 +T130 Coreference 2611 2615 IABP +E81 Coreference:T130 +T131 Coreference 2617 2630 nitroprusside +E82 Coreference:T131 +R52 IDENTICAL Arg1:E81 Arg2:E73 +R53 IDENTICAL Arg1:E82 Arg2:E77 +T133 Diagnostic_procedure 2696 2710 liver function +E84 Diagnostic_procedure:T133 +T134 Lab_value 2723 2729 normal +R55 MODIFY Arg1:T134 Arg2:E84 +T135 Diagnostic_procedure 2650 2668 clinical situation +E85 Diagnostic_procedure:T135 +T136 Lab_value 2679 2687 improved +R56 MODIFY Arg1:T136 Arg2:E85 +T137 Diagnostic_procedure 2735 2749 renal function +E86 Diagnostic_procedure:T137 +T138 Lab_value 2755 2763 improved +R57 MODIFY Arg1:T138 Arg2:E86 +T139 Sign_symptom 2780 2788 diuresis +E87 Sign_symptom:T139 +T140 Diagnostic_procedure 2793 2803 creatinine +E88 Diagnostic_procedure:T140 +T141 Lab_value 2814 2817 798 +T142 Lab_value 2821 2830 98 μmol/l +A6 TREND E88 DEC +R58 MODIFY Arg1:T141 Arg2:E88 +R59 MODIFY Arg1:T142 Arg2:E88 +T143 Diagnostic_procedure 2836 2838 EF +E89 Diagnostic_procedure:T143 +T144 Lab_value 2867 2870 15% +R60 MODIFY Arg1:T144 Arg2:E89 +T145 Lab_value 2858 2865 reduced +R61 MODIFY Arg1:T145 Arg2:E89 +T146 Sign_symptom 2884 2903 behavioral problems +E90 Sign_symptom:T146 +T147 Sign_symptom 2908 2923 adipose stature +E91 Sign_symptom:T147 +T148 Therapeutic_procedure 2941 2957 heart transplant +E92 Therapeutic_procedure:T148 +A7 POLARITY E92 NEG +T149 Clinical_event 2932 2938 denied +E93 Clinical_event:T149 +R62 CAUSE Arg1:E91 Arg2:E93 +R63 CAUSE Arg1:E90 Arg2:E93 +R64 MODIFY Arg1:E93 Arg2:E92 +T150 Coreference 2979 2983 IABP +E94 Coreference:T150 +R65 IDENTICAL Arg1:E94 Arg2:E73 +T151 Duration 2988 2995 26 days +E95 Duration:T151 +T152 Duration 3001 3014 after 28 days +E96 Duration:T152 +T153 Clinical_event 3022 3033 transferred +E97 Clinical_event:T153 +T154 Nonbiological_location 3042 3054 our hospital +T155 Diagnostic_procedure 3073 3098 liver and renal functions +E98 Diagnostic_procedure:T155 +T156 Lab_value 3104 3110 normal +R66 MODIFY Arg1:T156 Arg2:E98 +T157 Medication 3135 3180 angiotensin-converting enzyme (ACE)-inhibitor +E99 Medication:T157 +T158 Medication 3184 3196 beta-blocker +E100 Medication:T158 +T159 Medication 3202 3211 diuretics +E101 Medication:T159 +T160 Clinical_event 3297 3307 discharged +E102 Clinical_event:T160 +T161 Duration 3234 3243 two weeks +E103 Duration:T161 +T162 Diagnostic_procedure 3248 3263 clinical status +E104 Diagnostic_procedure:T162 +T163 Lab_value 3264 3272 improved +R67 MODIFY Arg1:T163 Arg2:E104 +T164 Diagnostic_procedure 3325 3341 echocardiography +E105 Diagnostic_procedure:T164 +T165 Diagnostic_procedure 3392 3394 EF +E106 Diagnostic_procedure:T165 +T166 Lab_value 3398 3401 20% +R68 MODIFY Arg1:T166 Arg2:E106 +T167 Date 3406 3416 March 2007 +E107 Date:T167 +T168 Biological_structure 3372 3386 left ventricle +T169 Lab_value 3364 3371 dilated +T170 Diagnostic_procedure 3422 3437 clinical status +E108 Diagnostic_procedure:T170 +T171 Lab_value 3442 3450 improved +R70 MODIFY Arg1:T171 Arg2:E108 +T172 Diagnostic_procedure 3465 3479 function class +E109 Diagnostic_procedure:T172 +T173 Lab_value 3480 3482 II +T175 Diagnostic_procedure 3520 3522 EF +E111 Diagnostic_procedure:T175 +T176 Diagnostic_procedure 3536 3552 echocardiography +E112 Diagnostic_procedure:T176 +T177 Lab_value 3556 3563 30%–35% +R71 MODIFY Arg1:T177 Arg2:E111 +R72 MODIFY Arg1:T29 Arg2:E20 +R73 MODIFY Arg1:T58 Arg2:E38 +R74 MODIFY Arg1:T62 Arg2:E40 +R75 MODIFY Arg1:T77 Arg2:E47 +R76 IDENTICAL Arg1:E2 Arg2:E1 +R77 MODIFY Arg1:T173 Arg2:E109 +T174 Detailed_description 3484 3510 New York Heart Association +R78 MODIFY Arg1:T174 Arg2:E109 +R79 SUB_PROCEDURE Arg1:E112 Arg2:E111 +R80 MODIFY Arg1:T154 Arg2:E97 +R81 MODIFY Arg1:T169 Arg2:E105 +R69 MODIFY Arg1:T168 Arg2:E105 +R82 MODIFY Arg1:T55 Arg2:E36 +R83 MODIFY Arg1:T21 Arg2:E14 +R84 IDENTICAL Arg1:E11 Arg2:E10 +R85 IDENTICAL Arg1:E8 Arg2:E7 +R86 MODIFY Arg1:T13 Arg2:E7 +R87 MODIFY Arg1:T17 Arg2:E10 +R88 MODIFY Arg1:T64 Arg2:E41 +T178 Clinical_event 2229 2240 transferred +E110 Clinical_event:T178 +T179 Date 2205 2221 After three days +E113 Date:T179 +T180 Nonbiological_location 3311 3319 his home +R89 MODIFY Arg1:T180 Arg2:E102 +* OVERLAP E1 E3 E6 E4 +R1 IDENTICAL Arg1:E5 Arg2:E4 +R90 BEFORE Arg1:E4 Arg2:E7 +* OVERLAP E7 E9 +R91 BEFORE Arg1:E9 Arg2:E10 +* OVERLAP E10 E12 +R92 BEFORE Arg1:E12 Arg2:E13 +* OVERLAP E13 E14 E15 E16 E17 E18 E19 E20 E21 E26 E27 E28 +R93 MODIFY Arg1:T22 Arg2:E15 +R94 BEFORE Arg1:E28 Arg2:E29 +* OVERLAP E29 E30 E31 +R95 BEFORE Arg1:E31 Arg2:E32 +* OVERLAP E32 E33 +R96 BEFORE Arg1:E33 Arg2:E34 +* OVERLAP E34 E35 +R97 BEFORE Arg1:E35 Arg2:E36 +* OVERLAP E36 E37 E38 E39 E40 E41 E42 E44 E45 E46 E47 E49 E50 +R98 IDENTICAL Arg1:E48 Arg2:E47 +R99 BEFORE Arg1:E50 Arg2:E51 +R100 BEFORE Arg1:E51 Arg2:E52 +* OVERLAP E52 E54 +R101 BEFORE Arg1:E54 Arg2:E56 +* OVERLAP E56 E57 E58 E59 E60 E61 E62 E63 E65 E66 E67 E68 E69 E70 +R102 BEFORE Arg1:E70 Arg2:E113 +* OVERLAP E113 E110 E71 E72 E75 +R103 MODIFY Arg1:T115 Arg2:E110 +R104 BEFORE Arg1:E75 Arg2:E73 +R105 IDENTICAL Arg1:E74 Arg2:E73 +* OVERLAP E73 E77 E78 +R106 BEFORE Arg1:E78 Arg2:E79 +* OVERLAP E79 E80 E83 E85 E84 E86 E87 E88 E89 +T132 Therapeutic_procedure 2636 2644 dialysis +E83 Therapeutic_procedure:T132 +R54 BEFORE Arg1:E89 Arg2:E90 +* OVERLAP E90 E91 E93 E92 +R107 BEFORE Arg1:E92 Arg2:E94 +* OVERLAP E94 E95 +R108 BEFORE Arg1:E95 Arg2:E96 +* OVERLAP E96 E97 E98 E99 E100 E101 +R109 BEFORE Arg1:E101 Arg2:E103 +* OVERLAP E103 E104 +R110 BEFORE Arg1:E104 Arg2:E102 +* OVERLAP E102 E105 E106 +R111 BEFORE Arg1:E106 Arg2:E107 +* OVERLAP E107 E108 E109 E111