--- a +++ b/processing/MACCROBAT/18416479.ann @@ -0,0 +1,353 @@ +T1 Age 2 13 74-year-old +T2 Sex 14 17 man +T3 Clinical_event 22 30 referred +E1 Clinical_event:T3 +T4 Nonbiological_location 38 46 hospital +T5 Date 50 63 November 2000 +E2 Date:T5 +T6 Sign_symptom 75 92 liver dysfunction +E3 Sign_symptom:T6 +T7 Disease_disorder 164 182 nephrotic syndrome +E4 Disease_disorder:T7 +T8 Date 186 190 1995 +E5 Date:T8 +T9 Clinical_event 111 126 medical checkup +E6 Clinical_event:T9 +T10 Diagnostic_procedure 192 215 Laboratory examinations +E7 Diagnostic_procedure:T10 +T11 Diagnostic_procedure 232 259 serum hepatobiliary enzymes +E8 Diagnostic_procedure:T11 +T12 Lab_value 223 231 elevated +R1 MODIFY Arg1:T12 Arg2:E8 +T13 Diagnostic_procedure 264 267 IgM +E9 Diagnostic_procedure:T13 +R2 MODIFY Arg1:T12 Arg2:E9 +T14 Diagnostic_procedure 289 317 antimitochondrial antibodies +E10 Diagnostic_procedure:T14 +T15 Lab_value 277 285 presence +R3 MODIFY Arg1:T15 Arg2:E10 +T16 Diagnostic_procedure 341 352 Hepatitis B +E11 Diagnostic_procedure:T16 +T17 Diagnostic_procedure 319 336 Serologic markers +E12 Diagnostic_procedure:T17 +R4 SUB_PROCEDURE Arg1:E11 Arg2:E12 +T18 Diagnostic_procedure 341 350;357 358 Hepatitis C +E13 Diagnostic_procedure:T18 +R5 SUB_PROCEDURE Arg1:E13 Arg2:E12 +T19 Lab_value 372 380 negative +R6 MODIFY Arg1:T19 Arg2:E13 +R7 MODIFY Arg1:T19 Arg2:E11 +T20 Diagnostic_procedure 382 409 Histopathologic examination +E14 Diagnostic_procedure:T20 +T21 Diagnostic_procedure 421 436 biopsy specimen +E15 Diagnostic_procedure:T21 +T22 Biological_structure 415 420 liver +R8 MODIFY Arg1:T22 Arg2:E15 +T23 Therapeutic_procedure 449 460 laparoscopy +E16 Therapeutic_procedure:T23 +R9 MODIFY Arg1:E16 Arg2:E15 +T24 Disease_disorder 498 509 cholangitis +E17 Disease_disorder:T24 +T25 Detailed_description 470 485 non-suppurative +T26 Detailed_description 486 497 destructive +T27 Biological_structure 517 528 portal area +R10 MODIFY Arg1:T26 Arg2:E17 +R11 MODIFY Arg1:T25 Arg2:E17 +R12 MODIFY Arg1:T27 Arg2:E17 +T28 Disease_disorder 559 562 PBC +E18 Disease_disorder:T28 +T29 Disease_disorder 564 579 Scheuer stage 3 +E19 Disease_disorder:T29 +R13 MODIFY Arg1:E19 Arg2:E18 +T30 Medication 599 619 ursodeoxycholic acid +E20 Medication:T30 +T31 Dosage 621 627 900 mg +T32 Frequency 628 633 daily +T33 Date 651 672 January and June 2002 +E21 Date:T33 +T35 Therapeutic_procedure 696 724 endoscopic variceal ligation +E23 Therapeutic_procedure:T35 +T36 Therapeutic_procedure 730 764 endoscopic injection sclerotherapy +E24 Therapeutic_procedure:T36 +T37 Therapeutic_procedure 776 800 argon plasma coagulation +E25 Therapeutic_procedure:T37 +T38 Sign_symptom 815 833 esophageal varices +E26 Sign_symptom:T38 +T39 Severity 805 814 worsening +R14 MODIFY Arg1:T39 Arg2:E26 +T40 Date 838 852 September 2007 +E27 Date:T40 +T41 Clinical_event 870 878 admitted +E28 Clinical_event:T41 +T42 Sign_symptom 910 928 esophageal varices +E29 Sign_symptom:T42 +T43 Severity 900 909 recurrent +R15 MODIFY Arg1:T43 Arg2:E29 +T44 Diagnostic_procedure 934 948 platelet count +E30 Diagnostic_procedure:T44 +T45 Lab_value 968 978 52 × 109/L +T46 Lab_value 983 993 69 × 109/L +R16 MODIFY Arg1:T45 Arg2:E30 +R17 MODIFY Arg1:T46 Arg2:E30 +T47 Duration 998 1011 several years +E31 Duration:T47 +R18 MODIFY Arg1:E31 Arg2:E30 +T48 Lab_value 1033 1041 decrease +T49 Lab_value 1047 1057 61 × 109/L +T50 Date 1061 1070 June 2007 +E32 Date:T50 +T51 Lab_value 1074 1083 8 × 109/L +T52 Date 1084 1105 just before admission +E33 Date:T52 +T53 Coreference 1017 1019 it +E34 Coreference:T53 +R19 IDENTICAL Arg1:E34 Arg2:E30 +T54 Sign_symptom 1135 1151 thrombocytopenia +E35 Sign_symptom:T54 +T55 Detailed_description 1118 1131 deterioration +R20 MODIFY Arg1:T55 Arg2:E35 +T56 Disease_disorder 1172 1191 infectious diseases +E36 Disease_disorder:T56 +A1 POLARITY E36 NEG +T57 Medication 1214 1224 medication +E37 Medication:T57 +A2 POLARITY E37 NEG +T58 Date 1229 1238 admission +E38 Date:T58 +T59 Sign_symptom 1264 1271 purpura +E39 Sign_symptom:T59 +A3 POLARITY E39 NEG +T60 Sign_symptom 1276 1293 bleeding episodes +E40 Sign_symptom:T60 +A4 POLARITY E40 NEG +T61 Diagnostic_procedure 1347 1376 platelet-associated IgG level +E41 Diagnostic_procedure:T61 +T62 Lab_value 1390 1394 high +T63 Detailed_description 1381 1389 markedly +R21 MODIFY Arg1:T63 Arg2:T62 +R22 MODIFY Arg1:T62 Arg2:E41 +T64 Diagnostic_procedure 1408 1414 biopsy +E42 Diagnostic_procedure:T64 +T65 Biological_structure 1396 1407 Bone marrow +R23 MODIFY Arg1:T65 Arg2:E42 +T66 Sign_symptom 1424 1444 normocellular marrow +E43 Sign_symptom:T66 +T67 Sign_symptom 1453 1468 cellular atypia +E44 Sign_symptom:T67 +A5 POLARITY E44 NEG +T68 Diagnostic_procedure 1470 1485 Ultrasonography +E45 Diagnostic_procedure:T68 +T69 Diagnostic_procedure 1490 1516 magnetic resonance imaging +E46 Diagnostic_procedure:T69 +T70 Sign_symptom 1528 1537 cirrhotic +E47 Sign_symptom:T70 +T71 Biological_structure 1538 1543 liver +R24 MODIFY Arg1:T71 Arg2:E47 +T72 Sign_symptom 1549 1561 splenomegaly +E48 Sign_symptom:T72 +T73 Sign_symptom 1563 1570 ascites +E49 Sign_symptom:T73 +T74 Sign_symptom 1576 1586 gallstones +E50 Sign_symptom:T74 +T75 Diagnostic_procedure 1592 1603 spleen size +E51 Diagnostic_procedure:T75 +T76 Lab_value 1617 1626 unchanged +R25 MODIFY Arg1:T76 Arg2:E51 +T77 Detailed_description 1632 1640 previous +T78 Diagnostic_procedure 1641 1661 imaging examinations +E52 Diagnostic_procedure:T78 +R26 MODIFY Arg1:T77 Arg2:E52 +R27 MODIFY Arg1:E52 Arg2:T76 +T79 Disease_disorder 1707 1710 PBC +E53 Disease_disorder:T79 +T80 Disease_disorder 1712 1741 decompensated liver cirrhosis +E54 Disease_disorder:T80 +T81 Disease_disorder 1748 1751 ITP +E55 Disease_disorder:T81 +T82 Diagnostic_procedure 1767 1807 Human leukocyte antigen (HLA) genotyping +E56 Diagnostic_procedure:T82 +T83 Diagnostic_procedure 1822 1871 polymerase chain reaction-sequencing-based typing +E57 Diagnostic_procedure:T83 +T84 Diagnostic_procedure 1875 1926 polymerase chain reaction-sequence specific primers +E58 Diagnostic_procedure:T84 +R28 SUB_PROCEDURE Arg1:E57 Arg2:E56 +R29 SUB_PROCEDURE Arg1:E58 Arg2:E56 +T85 Sign_symptom 1962 1972 A*02010101 +E59 Sign_symptom:T85 +T86 Sign_symptom 1974 1982 B*400201 +E60 Sign_symptom:T86 +T87 Sign_symptom 1984 1992 C*030401 +E61 Sign_symptom:T87 +T88 Sign_symptom 1994 2004 C*07020101 +E62 Sign_symptom:T88 +T89 Sign_symptom 2006 2015 DPB1*0501 +E63 Sign_symptom:T89 +T90 Sign_symptom 2017 2026 DQA1*0103 +E64 Sign_symptom:T90 +T91 Sign_symptom 2028 2039 DQA1*030101 +E65 Sign_symptom:T91 +T92 Sign_symptom 2041 2052 DQB1*030201 +E66 Sign_symptom:T92 +T93 Sign_symptom 2054 2065 DQB1*060101 +E67 Sign_symptom:T93 +T94 Sign_symptom 2067 2078 DRB1*080201 +E68 Sign_symptom:T94 +T95 Sign_symptom 2084 2095 DRB1*080302 +E69 Sign_symptom:T95 +T96 Diagnostic_procedure 2101 2121 13C urea breath test +E70 Diagnostic_procedure:T96 +T97 Diagnostic_procedure 2126 2144 H pylori infection +E71 Diagnostic_procedure:T97 +R30 SUB_PROCEDURE Arg1:E70 Arg2:E71 +T98 Lab_value 2149 2157 negative +R31 MODIFY Arg1:T98 Arg2:E71 +T99 Medication 2201 2213 prednisolone +E72 Medication:T99 +T100 Administration 2196 2200 Oral +R32 MODIFY Arg1:T100 Arg2:E72 +T101 Dosage 2215 2220 30 mg +T102 Frequency 2221 2226 daily +T103 Coreference 2232 2235 ITP +E73 Coreference:T103 +R33 IDENTICAL Arg1:E73 Arg2:E55 +T104 Date 2251 2257 day 11 +E74 Date:T104 +T105 Medication 2263 2279 diuretic therapy +E75 Medication:T105 +T106 Medication 2294 2310 albumin infusion +E76 Medication:T106 +R34 CAUSE Arg1:E73 Arg2:E72 +T107 Sign_symptom 2315 2322 ascites +E77 Sign_symptom:T107 +R35 CAUSE Arg1:E77 Arg2:E76 +R36 CAUSE Arg1:E77 Arg2:E75 +T108 Diagnostic_procedure 2345 2359 platelet count +E78 Diagnostic_procedure:T108 +T109 Lab_value 2360 2384 did not increase notably +R37 MODIFY Arg1:T109 Arg2:E78 +T110 Medication 2386 2399 pulse therapy +E79 Medication:T110 +T111 Administration 2405 2416 intravenous +T112 Medication 2417 2435 methylprednisolone +E80 Medication:T112 +R38 MODIFY Arg1:T111 Arg2:E80 +T113 Dosage 2437 2440 1 g +T114 Frequency 2441 2446 daily +T115 Duration 2461 2471 d 22 to 24 +E81 Duration:T115 +T116 Coreference 2486 2494 response +E82 Coreference:T116 +R40 IDENTICAL Arg1:E82 Arg2:E78 +T117 Lab_value 2499 2503 weak +R41 MODIFY Arg1:T117 Arg2:E82 +T118 Detailed_description 2508 2517 temporary +R42 MODIFY Arg1:T118 Arg2:E82 +T119 Date 2522 2526 d 31 +E83 Date:T119 +T120 Sign_symptom 2533 2539 melena +E84 Sign_symptom:T120 +T121 Severity 2528 2532 mild +R43 MODIFY Arg1:T121 Arg2:E84 +T122 Medication 2601 2630 immune gamma globulin therapy +E85 Medication:T122 +T123 Administration 2589 2600 intravenous +R44 MODIFY Arg1:T123 Arg2:E85 +T124 Detailed_description 2580 2585 trial +R45 MODIFY Arg1:T124 Arg2:E85 +T125 Dosage 2632 2636 25 g +T126 Frequency 2637 2642 daily +R46 MODIFY Arg1:T126 Arg2:E85 +T127 Duration 2647 2657 d 32 to 36 +E86 Duration:T127 +T128 Medication 2703 2735 methylprednisolone pulse therapy +E87 Medication:T128 +T129 Administration 2691 2702 intravenous +T130 Detailed_description 2675 2687 second round +R47 MODIFY Arg1:T130 Arg2:E87 +R48 MODIFY Arg1:T129 Arg2:E87 +T131 Duration 2739 2749 d 32 to 34 +E88 Duration:T131 +T132 Coreference 2770 2778 response +E89 Coreference:T132 +T133 Diagnostic_procedure 2829 2843 platelet count +E90 Diagnostic_procedure:T133 +R49 IDENTICAL Arg1:E89 Arg2:E78 +T134 Lab_value 2761 2769 moderate +R50 MODIFY Arg1:T134 Arg2:E89 +T135 Medication 2793 2805 prednisolone +E91 Medication:T135 +T136 Clinical_event 2810 2819 continued +E92 Clinical_event:T136 +R51 MODIFY Arg1:E92 Arg2:E91 +T137 Lab_value 2844 2860 increased slowly +R52 MODIFY Arg1:T137 Arg2:E90 +T138 Sign_symptom 2866 2904 ascites was relatively well controlled +E93 Sign_symptom:T138 +T139 Medication 2910 2919 diuretics +E94 Medication:T139 +R53 CAUSE Arg1:E94 Arg2:E93 +T140 Clinical_event 2923 2932 discharge +E95 Clinical_event:T140 +T141 Disease_disorder 2950 2979 decompensated liver cirrhosis +E96 Disease_disorder:T141 +T142 Diagnostic_procedure 2988 3002 platelet count +E97 Diagnostic_procedure:T142 +T143 Clinical_event 3047 3056 follow-up +E98 Clinical_event:T143 +T144 Sign_symptom 3060 3078 esophageal varices +E99 Sign_symptom:T144 +T145 Therapeutic_procedure 3087 3118 prophylactic endoscopic therapy +E100 Therapeutic_procedure:T145 +A6 POLARITY E100 NEG +R54 MODIFY Arg1:T4 Arg2:E1 +* OVERLAP E1 E2 E3 +R55 AFTER Arg1:E3 Arg2:E6 +R56 AFTER Arg1:E6 Arg2:E4 +* OVERLAP E4 E5 +R57 BEFORE Arg1:E5 Arg2:E7 +* OVERLAP E7 E8 E9 E10 E12 E14 E15 E17 E18 +R58 MODIFY Arg1:T31 Arg2:E20 +R59 MODIFY Arg1:T32 Arg2:E20 +R60 BEFORE Arg1:E18 Arg2:E20 +R61 BEFORE Arg1:E20 Arg2:E21 +R63 BEFORE Arg1:E26 Arg2:E27 +* OVERLAP E27 E28 E29 +R64 AFTER Arg1:E29 Arg2:E30 +R65 BEFORE Arg1:E30 Arg2:E34 +R66 MODIFY Arg1:T48 Arg2:E34 +R67 MODIFY Arg1:T49 Arg2:E34 +R68 MODIFY Arg1:E32 Arg2:T49 +R69 MODIFY Arg1:T51 Arg2:E34 +R70 MODIFY Arg1:E33 Arg2:T51 +R71 BEFORE Arg1:E34 Arg2:E32 +R72 BEFORE Arg1:E32 Arg2:E33 +* OVERLAP E33 E35 +R73 AFTER Arg1:E35 Arg2:E36 +* OVERLAP E36 E37 +R74 BEFORE Arg1:E37 Arg2:E38 +* OVERLAP E38 E39 E40 E41 E42 E43 E44 E45 E46 E47 E48 E49 E50 E51 +R75 BEFORE Arg1:E51 Arg2:E53 +R76 IDENTICAL Arg1:E53 Arg2:E54 +* OVERLAP E53 E55 E56 E59 E60 E61 E62 E63 E64 E65 E66 E67 E68 E69 E70 +R77 BEFORE Arg1:E70 Arg2:E72 +R78 MODIFY Arg1:T101 Arg2:E72 +R79 MODIFY Arg1:T102 Arg2:E72 +* OVERLAP E72 E74 E75 E76 +R80 BEFORE Arg1:E76 Arg2:E78 +* OVERLAP E78 E79 E80 E81 +R39 MODIFY Arg1:T113 Arg2:E80 +R81 MODIFY Arg1:T114 Arg2:E80 +R82 BEFORE Arg1:E81 Arg2:E82 +R83 BEFORE Arg1:E82 Arg2:E83 +R84 MODIFY Arg1:T125 Arg2:E85 +* OVERLAP E83 E84 +R85 BEFORE Arg1:E84 Arg2:E85 +* OVERLAP E85 E86 E87 E88 +R86 BEFORE Arg1:E88 Arg2:E89 +* OVERLAP E89 E91 E90 +R87 BEFORE Arg1:E90 Arg2:E93 +* OVERLAP E93 E95 E96 E97 +R88 MODIFY Arg1:E99 Arg2:E98 +R89 BEFORE Arg1:E97 Arg2:E98 +* OVERLAP E98 E100 +* OVERLAP E21 E23 E24 E25 E26