deepvariant-r1.6.1 / Git / Commit [9b26b7]

Catherine Stones

deepvariant-r1.6.1

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Commit [9b26b7] main

Initial commit

Authored by: cathy-stones 2024-08-08

Browse code at this revision

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added	deepvariant/labeler/positional_labeler_test.py
added	deepvariant/labeler/variant_labeler.py
added	deepvariant/labeler/variant_labeler_test.py
added	deepvariant/logging_level.py
added	deepvariant/make_examples.py
added	deepvariant/make_examples_core.py
added	deepvariant/make_examples_core_test.py
added	deepvariant/make_examples_options.py
added	deepvariant/make_examples_somatic.py
added	deepvariant/make_examples_somatic_test.py
added	deepvariant/make_examples_test.py
added	deepvariant/merge_phased_reads.cc
added	deepvariant/merge_phased_reads.h
added	deepvariant/merge_phased_reads_main.cc
added	deepvariant/merge_phased_reads_test.cc
added	deepvariant/modeling.py
added	deepvariant/modeling_test.py
added	deepvariant/multiallelic_model/saved_model.pb
added	deepvariant/multiallelic_model/variables/variables.data-00000-of-00002
added	deepvariant/multiallelic_model/variables/variables.data-00001-of-00002
added	deepvariant/multiallelic_model/variables/variables.index
added	deepvariant/multisample_make_examples.py
added	deepvariant/pileup_channel_lib.h
added	deepvariant/pileup_channel_lib_test.cc
added	deepvariant/pileup_image.py

deepvariant/labeler/positional_labeler_test.py Diff Switch to side-by-side view

deepvariant/labeler/variant_labeler.py Diff Switch to side-by-side view

deepvariant/labeler/variant_labeler_test.py Diff Switch to side-by-side view

deepvariant/logging_level.py Diff Switch to side-by-side view

deepvariant/make_examples.py Diff Switch to side-by-side view

deepvariant/make_examples_core.py Diff Switch to side-by-side view

deepvariant/make_examples_core_test.py Diff Switch to side-by-side view

deepvariant/make_examples_options.py Diff Switch to side-by-side view

deepvariant/make_examples_somatic.py Diff Switch to side-by-side view

deepvariant/make_examples_somatic_test.py Diff Switch to side-by-side view

deepvariant/make_examples_test.py Diff Switch to side-by-side view

deepvariant/merge_phased_reads.cc Diff Switch to side-by-side view

deepvariant/merge_phased_reads.h Diff Switch to side-by-side view

deepvariant/merge_phased_reads_main.cc Diff Switch to side-by-side view

deepvariant/merge_phased_reads_test.cc Diff Switch to side-by-side view

deepvariant/modeling.py Diff Switch to side-by-side view

deepvariant/modeling_test.py Diff Switch to side-by-side view

deepvariant/multiallelic_model/saved_model.pb

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deepvariant/multiallelic_model/variables/variables.data-00000-of-00002

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deepvariant/multiallelic_model/variables/variables.data-00001-of-00002

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deepvariant/multiallelic_model/variables/variables.index

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deepvariant/multisample_make_examples.py Diff Switch to side-by-side view

deepvariant/pileup_channel_lib.h Diff Switch to side-by-side view

deepvariant/pileup_channel_lib_test.cc Diff Switch to side-by-side view

deepvariant/pileup_image.py Diff Switch to side-by-side view

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