--- a +++ b/.github/workflows/dags.yml @@ -0,0 +1,59 @@ +--- +name: Generate DAG visualizations +on: + workflow_dispatch: + inputs: + comments: + description: "Comments" + +jobs: + generate_dag: + runs-on: ubuntu-latest + strategy: + matrix: + python-version: ["3.9"] + + steps: + - name: Print author + run: | + echo "Author: ${{ github.triggering_actor }}" + echo "Comments: ${{ github.event.inputs.comments }}" + + - name: Checkout main branch + uses: actions/checkout@v3 + with: + ref: refs/heads/master + + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v4 + with: + python-version: ${{ matrix.python-version }} + + - name: Install non-python dependencies + run: | + sudo apt-get install -y graphviz-dev graphviz + + - name: Install dependencies + run: | + python -m pip install --upgrade pip + python -m pip install snakebids + + - name: Set-up env for hippunfold + run: | + echo "HIPPUNFOLD_CACHE_DIR=`pwd`/test_data/fake_models" >> $GITHUB_ENV + echo "HIPPUNFOLD=./hippunfold/run.py" >> $GITHUB_ENV + + - name: Generate rulegraph single T2w bids + run: | + $HIPPUNFOLD test_data/bids_singleT2w test_out participant -np --modality T2w --rulegraph | dot -Tsvg > docs/images/rulegraph_T2w.svg + + - name: Commit updates + run: | + git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com" + git config --local user.name "github-actions[bot]" + git diff-index --quiet HEAD || git add docs/images || commit -m "Add updated dags [skip ci]" + + - name: Push changes + uses: ad-m/github-push-action@v0.8.0 + with: + github_token: ${{ secrets.GITHUB_TOKEN }}