[0a8e41]: / test / ensemble.tsv

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# CHROM POS ID REF ALT if_MuTect if_VarScan2 if_JointSNVMix2 if_SomaticSniper if_VarDict MuSE_Tier if_LoFreq if_Scalpel if_Strelka if_TNscope Strelka_Score Strelka_QSS Strelka_TQSS VarScan2_Score SNVMix2_Score Sniper_Score VarDict_Score if_dbsnp COMMON if_COSMIC COSMIC_CNT Consistent_Mates Inconsistent_Mates N_DP nBAM_REF_MQ nBAM_ALT_MQ nBAM_Z_Ranksums_MQ nBAM_REF_BQ nBAM_ALT_BQ nBAM_Z_Ranksums_BQ nBAM_REF_NM nBAM_ALT_NM nBAM_NM_Diff nBAM_REF_Concordant nBAM_REF_Discordant nBAM_ALT_Concordant nBAM_ALT_Discordant nBAM_Concordance_FET N_REF_FOR N_REF_REV N_ALT_FOR N_ALT_REV nBAM_StrandBias_FET nBAM_Z_Ranksums_EndPos nBAM_REF_Clipped_Reads nBAM_ALT_Clipped_Reads nBAM_Clipping_FET nBAM_MQ0 nBAM_Other_Reads nBAM_Poor_Reads nBAM_REF_InDel_3bp nBAM_REF_InDel_2bp nBAM_REF_InDel_1bp nBAM_ALT_InDel_3bp nBAM_ALT_InDel_2bp nBAM_ALT_InDel_1bp M2_NLOD M2_TLOD M2_STR M2_ECNT SOR MSI MSILEN SHIFT3 MaxHomopolymer_Length SiteHomopolymer_Length T_DP tBAM_REF_MQ tBAM_ALT_MQ tBAM_Z_Ranksums_MQ tBAM_REF_BQ tBAM_ALT_BQ tBAM_Z_Ranksums_BQ tBAM_REF_NM tBAM_ALT_NM tBAM_NM_Diff tBAM_REF_Concordant tBAM_REF_Discordant tBAM_ALT_Concordant tBAM_ALT_Discordant tBAM_Concordance_FET T_REF_FOR T_REF_REV T_ALT_FOR T_ALT_REV tBAM_StrandBias_FET tBAM_Z_Ranksums_EndPos tBAM_REF_Clipped_Reads tBAM_ALT_Clipped_Reads tBAM_Clipping_FET tBAM_MQ0 tBAM_Other_Reads tBAM_Poor_Reads tBAM_REF_InDel_3bp tBAM_REF_InDel_2bp tBAM_REF_InDel_1bp tBAM_ALT_InDel_3bp tBAM_ALT_InDel_2bp tBAM_ALT_InDel_1bp InDel_Length TrueVariant_or_False
1 22 21989959 rs140863589 AAG A 1 1 0 0 1 0 0 0 1 0 17.18 False False 67.24 0 0 50.00 1 1 0 0 9 0 74 60 0 0 33.7027 0 0 0.256757 0 0 74 0 0 0 1.00 27 47 0 0 1.00 0 4 0 1.00 0 0 0 1 1 0 0 0 0 16.79 72.79 0 1 0.0 2.0 1.0 0.0 3 2 135 60 60.9375 0.799385 33.0874 34.6562 4.51691 0.203883 2.1875 -0.0163835 102 1 32 0 1.00 31 72 11 21 0.67 0.134524 3 2 0.59 0 0 0 0 0 0 0 0 0 -2 0
2 22 21330787 rs7285694 C T 1 1 0 1 1 1 0 0 1 0 19.98 202 1 149.31 0 114 100 1 1 0 0 20 0 165 60 0 0 34.503 0 0 0.309091 0 0 165 0 0 0 1.00 70 95 0 0 1.00 0 10 0 1.00 0 0 0 2 1 1 0 0 0 38.31 183.62 0 1 0.0 3.0 1.0 0.0 3 3 387 60 60 0 34.896 33.2644 -6.29209 0.181208 1.21839 1.03718 298 0 86 1 0.23 144 154 37 50 0.39 -0.756671 15 8 0.19 0 2 0 0 0 0 0 0 0 0 0
3 22 21332122 rs178277 G A 1 1 0 1 1 1 0 0 1 0 17.77 173 2 119.21 0 68 100 1 1 0 0 7 0 141 60 0 0 34.7163 0 0 0.248227 0 0 141 0 0 0 1.00 78 63 0 0 1.00 0 9 0 1.00 0 0 0 0 0 0 0 0 0 33.3 146.25 0 1 0.0 2.0 1.0 0.0 4 2 268 59.9043 60 0.0561096 34.823 33.8983 -4.35848 0.263158 1.16949 0.906334 209 0 59 0 1.00 121 88 37 22 0.55 0.283401 15 3 0.77 0 0 0 1 1 0 0 0 0 0 0
4 22 21334924 rs105034 G C 1 1 0 1 1 1 0 0 1 0 19.98 102 1 49.18 0 151 40.00 1 1 0 0 4 0 57 60 0 0 37.5439 0 0 0.526316 0 0 57 0 0 0 1.00 43 14 0 0 1.00 0 3 0 1.00 0 0 0 0 0 0 0 0 0 14.14 59.15 0 1 0.0 2.0 2.0 1.0 4 3 101 60 60 0 37.8846 37.1739 -1.97187 0.538462 2.6087 2.07023 78 0 23 0 1.00 58 20 16 7 0.79 -0.202451 7 1 0.68 0 0 0 0 0 0 0 0 0 0 0
5 22 21335259 rs178278 C A 1 1 0 0 1 1 0 0 1 0 19.87 149 1 94.20 0 0 100 1 1 0 0 11 0 135 60 0 0 35.1556 0 0 0.118519 0 0 135 0 0 0 1.00 69 66 0 0 1.00 0 8 0 1.00 0 0 0 1 0 0 0 0 0 26.93 81.64 0 1 0.0 4.0 1.0 0.0 4 4 234 60 60 0 35.0632 31.75 -5.50023 0.136842 1.04545 0.908612 190 0 44 0 1.00 98 92 23 21 1.00 1.73496 14 0 0.08 0 0 0 0 0 0 0 0 0 0 0
6 22 21384516 rs61740649 C T 1 1 0 1 1 1 0 0 1 0 19.98 108 2 53.85 0 121 43.01 1 1 0 0 5 0 47 60 0 0 33.4043 0 0 0.340426 0 0 47 0 0 0 1.00 15 32 0 0 1.00 0 4 0 1.00 0 0 0 0 0 0 0 0 0 10.23 64.12 0 1 0.0 1.0 1.0 0.0 6 6 90 60 60 0 33.3594 35.0385 3.365 0.375 1.11538 0.740385 63 1 26 0 1.00 22 42 7 19 0.62 0.698816 4 3 0.41 0 0 0 0 0 0 0 0 0 0 0
7 22 21982892 rs2298428 C T 1 1 0 1 1 1 0 0 1 0 19.98 133 1 78.56 0 182 100 1 1 0 0 10 0 68 60 0 0 35.4412 0 0 0.0882353 0 0 68 0 0 0 1.00 34 34 0 0 1.00 0 8 0 1.00 0 0 0 0 0 0 0 0 0 15.04 91.15 0 1 0.0 1.0 1.0 0.0 4 2 152 60 60 0 35.156 33.0698 -4.29932 0.110092 1.06977 0.959676 109 0 43 0 1.00 55 54 22 21 1.00 0.155447 6 0 0.18 0 0 0 0 0 0 0 0 0 0 0
8 22 21983260 rs2298429 A G 1 1 0 1 1 1 0 0 1 0 19.98 142 1 89.34 0 152 100 1 1 0 0 12 0 57 60 0 0 33.6667 0 0 0.210526 0 0 57 0 0 0 1.00 32 25 0 0 1.00 0 9 0 1.00 0 0 0 0 0 0 0 0 0 10.13 90.42 0 1 0.0 2.0 2.0 0.0 3 3 112 60 60 0 33.2143 33.4762 -1.90819 0.214286 1.2619 1.04762 70 0 42 0 1.00 38 32 28 14 0.24 -0.0480804 15 0 0.00 0 0 0 1 0 0 0 0 0 0 0