added	.gitignore
added	README.md
added	babel/activations.py
added	babel/adata_utils.py
added	babel/atac_utils.py
added	babel/genomic_interval.py
added	babel/interpretation.py
added	babel/loss_functions.py
added	babel/metrics.py
added	babel/model_utils.py
added	babel/models/autoencoders.py
added	babel/models/flows.py
added	babel/models/layers.py
added	babel/models/naive_nearest_neighbors.py
added	babel/perturb.py
added	babel/plot_utils.py
added	babel/protein_utils.py
added	babel/sc_data_loaders.py
added	babel/utils.py
added	bin/archr_gene_activity.R
added	bin/archr_gene_activity_batch.py
added	bin/archr_gene_integration.R
added	bin/combine_plaintext_atac_files.py
added	bin/convert_to_10x_dir_files.py
added	bin/convert_to_BIRD_input.py