--- a +++ b/softwares_database/fastp.txt @@ -0,0 +1,9 @@ +1. fastp installation +mamba install -c bioconda fastp -y + +2. Use fastp for rawdata quality control, filtering and statistics +#1 PE +fastp -i <path to read1 input file> -o <path to read1 output file> -I <path to read2 input file> -O <path to read2 output file> + +#2 SE +fastp -i <path to input file> -o <path to output file>