1. fastp installation
mamba install -c bioconda fastp -y
2. Use fastp for rawdata quality control, filtering and statistics
#1 PE
fastp -i <path to read1 input file> -o <path to read1 output file> -I <path to read2 input file> -O <path to read2 output file>
#2 SE
fastp -i <path to input file> -o <path to output file>