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cardiac-segmentation

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Authored by: tobiasharvey 2025-04-21

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added	.gitignore
added	1 - Methods with Improved Results/ModelFunctions.py
added	1 - Methods with Improved Results/SegmentationFunctions.py
added	1 - Methods with Improved Results/__pycache__/SegmentationFunctions.cpython-37.pyc
added	1 - Methods with Improved Results/__pycache__/SegmentationFunctions.cpython-38.pyc
added	1 - Methods with Improved Results/anatomical_roi_segmentation_model.ipynb
added	1 - Methods with Improved Results/model_pipeline.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/histograms_with_clusters_and_threshold.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_hist_with_kmeans.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_histograms.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/ModelFunctions.py
added	2 - KMeans & Morphology Methods - Rim et al/SegmentationFunctions.py
added	2 - KMeans & Morphology Methods - Rim et al/model_pipeline.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#16_truePositive.ipynb
added	2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#2_falsePositive.ipynb
added	3 - Statistical Parameter Methods - Larrey-Ruiz et al/automatic_region_selection_using_statistical_parameters.ipynb
added	3 - Statistical Parameter Methods - Larrey-Ruiz et al/preprocessing_with_hist_params.ipynb
added	Final Report.pdf
added	LICENSE
added	README.md
added	model_improved.sh
added	model_original.sh
added	pipeline-imgs-report/filt.png
added	pipeline-imgs-report/final_1.png
added	pipeline-imgs-report/final_2.png

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1 - Methods with Improved Results/ModelFunctions.py Diff Switch to side-by-side view

1 - Methods with Improved Results/SegmentationFunctions.py Diff Switch to side-by-side view

1 - Methods with Improved Results/pycache/SegmentationFunctions.cpython-37.pyc

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1 - Methods with Improved Results/pycache/SegmentationFunctions.cpython-38.pyc

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1 - Methods with Improved Results/anatomical_roi_segmentation_model.ipynb Diff Switch to side-by-side view

1 - Methods with Improved Results/model_pipeline.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/histograms_with_clusters_and_threshold.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_hist_with_kmeans.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_histograms.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/ModelFunctions.py Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/SegmentationFunctions.py Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/model_pipeline.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#16_truePositive.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#2_falsePositive.ipynb Diff Switch to side-by-side view

3 - Statistical Parameter Methods - Larrey-Ruiz et al/automatic_region_selection_using_statistical_parameters.ipynb Diff Switch to side-by-side view

3 - Statistical Parameter Methods - Larrey-Ruiz et al/preprocessing_with_hist_params.ipynb Diff Switch to side-by-side view

Final Report.pdf

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.gitignore Diff Switch to side-by-side view

1 - Methods with Improved Results/ModelFunctions.py Diff Switch to side-by-side view

1 - Methods with Improved Results/SegmentationFunctions.py Diff Switch to side-by-side view

1 - Methods with Improved Results/pycache/SegmentationFunctions.cpython-37.pyc

1 - Methods with Improved Results/pycache/SegmentationFunctions.cpython-38.pyc

1 - Methods with Improved Results/anatomical_roi_segmentation_model.ipynb Diff Switch to side-by-side view

1 - Methods with Improved Results/model_pipeline.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/histograms_with_clusters_and_threshold.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_hist_with_kmeans.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/Histograms with KMeans/rough_draft_histograms.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/ModelFunctions.py Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/SegmentationFunctions.py Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/model_pipeline.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#16_truePositive.ipynb Diff Switch to side-by-side view

2 - KMeans & Morphology Methods - Rim et al/segmentation_model_on_sample#2_falsePositive.ipynb Diff Switch to side-by-side view

3 - Statistical Parameter Methods - Larrey-Ruiz et al/automatic_region_selection_using_statistical_parameters.ipynb Diff Switch to side-by-side view

3 - Statistical Parameter Methods - Larrey-Ruiz et al/preprocessing_with_hist_params.ipynb Diff Switch to side-by-side view

Final Report.pdf

LICENSE Diff Switch to side-by-side view

README.md Diff Switch to side-by-side view

model_improved.sh Diff Switch to side-by-side view

model_original.sh Diff Switch to side-by-side view

pipeline-imgs-report/filt.png

pipeline-imgs-report/final_1.png

pipeline-imgs-report/final_2.png