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b/mimicsql/evaluation/breakdown_evaluation.ipynb |
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"cells": [ |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"import re\n", |
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"import csv\n", |
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"import pandas\n", |
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"import sqlite3\n", |
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"import random\n", |
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"import json\n", |
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"import itertools\n", |
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"import numpy as np\n", |
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"from sumeval.metrics.rouge import RougeCalculator\n", |
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"rouge = RougeCalculator(stopwords=False, lang=\"en\")\n", |
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"\n", |
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"from utils import *" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"db_file = 'mimic_db/mimic.db'\n", |
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"model = query(db_file)\n", |
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"(db_meta, db_tabs, db_head) = model._load_db(db_file)" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"headerDic = []\n", |
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"for tb in db_head:\n", |
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" for hd in db_head[tb]:\n", |
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" headerDic.append('.'.join([tb, hd]).lower())\n", |
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"# print(headerDic)\n", |
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"tableDic = []\n", |
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"for tb in db_head:\n", |
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" tableDic.append(tb.lower())\n", |
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"# print(tableDic)" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"def parse_sql(sql):\n", |
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" \n", |
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" sqlForm = {}\n", |
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" \n", |
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" arr = re.split('where', sql)\n", |
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" qlead = re.split('from', arr[0])\n", |
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" qagg = re.split('\\s', qlead[0])\n", |
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" qagg = list(filter(None, qagg))\n", |
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" if qagg[1] == 'count' or qagg[1] == 'min' or qagg[1] == 'max' or qagg[1] == 'avg':\n", |
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" sqlForm['sel'] = qagg[1]\n", |
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" else:\n", |
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" sqlForm['sel'] = ''\n", |
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" \n", |
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" itm = []\n", |
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" for wd in qagg:\n", |
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" if wd in headerDic:\n", |
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" itm.append(wd)\n", |
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" sqlForm['agg'] = itm\n", |
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" \n", |
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" itm = []\n", |
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" qtab = re.split('\\s', qlead[1])\n", |
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" qtab = list(filter(None, qtab))\n", |
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" for wd in qtab:\n", |
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" if wd in tableDic:\n", |
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" itm.append(wd)\n", |
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" sqlForm['tab'] = itm\n", |
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" \n", |
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" qtail = re.split('and', arr[-1])\n", |
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" itm = []\n", |
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" for cond in qtail:\n", |
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" cond = re.split('\\s', cond)\n", |
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" cond = list(filter(None, cond))\n", |
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" if len(cond) > 2:\n", |
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" condVal = ' '.join(cond[2:])\n", |
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" condVal = re.split('\\\"|\\s', condVal)\n", |
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" condVal = ' '.join(list(filter(None, condVal)))\n", |
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" itm.append(cond[:2] + [condVal])\n", |
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" sqlForm['cond'] = sorted(itm)\n", |
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" \n", |
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" return sqlForm\n", |
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"\n", |
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"fp = open('generated_sql/output.json', 'r')\n", |
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"outGen = []\n", |
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"outTtt = []\n", |
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"for line in fp:\n", |
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" line = json.loads(line)\n", |
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" gen = re.split('<stop>', line['sql_pred'])[0]\n", |
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" sqlG = parse_sql(gen)\n", |
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" outGen.append(sqlG)\n", |
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" \n", |
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" ttt = line['sql_gold']\n", |
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" sqlT = parse_sql(ttt)\n", |
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" outTtt.append(sqlT)\n", |
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"# print(sqlG)\n", |
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"# print(sqlT)\n", |
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"# break\n", |
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"fp.close()" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" if outGen[k] == outTtt[k]:\n", |
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" cnt += 1\n", |
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"print('Overall logic form accuracy: {}'.format(cnt/1000))" |
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] |
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}, |
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{ |
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"cell_type": "markdown", |
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"metadata": {}, |
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"source": [ |
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"## Aggregation" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" if outGen[k]['sel'] == outTtt[k]['sel']:\n", |
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" cnt += 1\n", |
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"print('Break-down accuracy on AGGREGATION OPERATION: {}'.format(cnt/1000))" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" if outGen[k]['agg'] == outTtt[k]['agg']:\n", |
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" cnt += 1\n", |
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"print('Break-down accuracy on AGGREGATION COLUMN: {}'.format(cnt/1000))" |
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] |
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}, |
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{ |
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"cell_type": "markdown", |
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"metadata": {}, |
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"source": [ |
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"## Table" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" if outGen[k]['tab'] == outTtt[k]['tab']:\n", |
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" cnt += 1\n", |
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"print('Break-down accuracy on TABLE: {}'.format(cnt/1000))" |
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] |
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}, |
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{ |
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"cell_type": "markdown", |
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"metadata": {}, |
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"source": [ |
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"## Condition" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" arrG = [wd[0] for wd in outGen[k]['cond']]\n", |
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" arrT = [wd[0] for wd in outTtt[k]['cond']]\n", |
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" if arrG == arrT:\n", |
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" cnt += 1\n", |
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"print(cnt)" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" arrG = [wd[:2] for wd in outGen[k]['cond']]\n", |
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" arrT = [wd[:2] for wd in outTtt[k]['cond']]\n", |
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" if arrG == arrT:\n", |
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" cnt += 1\n", |
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"print('Break-down accuracy on CONDITION COLUMN AND OPERATION: {}'.format(cnt/1000))" |
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] |
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}, |
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{ |
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"cell_type": "code", |
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"execution_count": null, |
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"metadata": {}, |
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"outputs": [], |
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"source": [ |
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"cnt = 0\n", |
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"for k in range(len(outGen)):\n", |
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" arrG = [wd[:3] for wd in outGen[k]['cond']]\n", |
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" arrT = [wd[:3] for wd in outTtt[k]['cond']]\n", |
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" if arrG == arrT:\n", |
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" cnt += 1\n", |
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"print('Break-down accuracy on CONDITION VALUE: {}'.format(cnt/1000))" |
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] |
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} |
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], |
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"metadata": { |
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"kernelspec": { |
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"display_name": "Python 3", |
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"language": "python", |
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"name": "python3" |
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}, |
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"language_info": { |
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"codemirror_mode": { |
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"name": "ipython", |
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"version": 3 |
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}, |
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"file_extension": ".py", |
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"mimetype": "text/x-python", |
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"name": "python", |
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"nbconvert_exporter": "python", |
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"pygments_lexer": "ipython3", |
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"version": "3.6.7" |
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} |
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}, |
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"nbformat": 4, |
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"nbformat_minor": 2 |
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} |