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/test-resources/entlink-features.json
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| a | b/test-resources/entlink-features.json | ||
|---|---|---|---|
| 1 | { |
||
| 2 | "text": "John was diagnosed with kidney failure. He has lung cancer too.", |
||
| 3 | "sentences": [ |
||
| 4 | { |
||
| 5 | "text": "John was diagnosed with kidney failure.", |
||
| 6 | "tokens": [ |
||
| 7 | { |
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| 8 | "shape": 10887629174180191697, |
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| 9 | "idx": 0, |
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| 10 | "ent": 380, |
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| 11 | "dep_": "nsubjpass", |
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| 12 | "lexspan": { |
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| 13 | "begin": 0, |
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| 14 | "end": 4 |
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| 15 | }, |
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| 16 | "is_stop": false, |
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| 17 | "tag_": "NNP", |
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| 18 | "i": 0, |
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| 19 | "lemma_": "John", |
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| 20 | "ent_": "PERSON", |
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| 21 | "is_punctuation": false, |
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| 22 | "shape_": "Xxxx", |
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| 23 | "ent_iob": 3, |
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| 24 | "is_contraction": false, |
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| 25 | "i_sent": 0, |
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| 26 | "is_pronoun": false, |
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| 27 | "is_space": false, |
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| 28 | "sent_i": 0, |
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| 29 | "norm": "John", |
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| 30 | "tag": 15794550382381185553, |
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| 31 | "dep": 430, |
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| 32 | "pos_": "PROPN", |
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| 33 | "norm_len": 4, |
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| 34 | "children": [], |
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| 35 | "is_superlative": false, |
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| 36 | "ent_iob_": "B", |
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| 37 | "is_wh": false, |
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| 38 | "is_ent": true, |
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| 39 | "tuis_": "", |
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| 40 | "tuis": "frozenset()", |
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| 41 | "tui_descs_": "", |
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| 42 | "is_concept": false, |
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| 43 | "detected_name_": "-<N>-", |
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| 44 | "cui": -1, |
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| 45 | "definition_": "-<N>-", |
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| 46 | "sub_names": [], |
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| 47 | "pref_name_": "-<N>-", |
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| 48 | "cui_": "-<N>-" |
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| 49 | }, |
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| 50 | { |
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| 51 | "shape": 4088098365541558500, |
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| 52 | "idx": 5, |
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| 53 | "ent": 0, |
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| 54 | "dep_": "auxpass", |
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| 55 | "lexspan": { |
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| 56 | "begin": 5, |
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| 57 | "end": 8 |
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| 58 | }, |
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| 59 | "is_stop": true, |
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| 60 | "tag_": "VBD", |
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| 61 | "i": 1, |
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| 62 | "lemma_": "be", |
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| 63 | "ent_": "-<N>-", |
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| 64 | "is_punctuation": false, |
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| 65 | "shape_": "xxx", |
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| 66 | "ent_iob": 0, |
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| 67 | "is_contraction": false, |
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| 68 | "i_sent": 1, |
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| 69 | "is_pronoun": false, |
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| 70 | "is_space": false, |
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| 71 | "sent_i": 0, |
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| 72 | "norm": "was", |
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| 73 | "tag": 17109001835818727656, |
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| 74 | "dep": 406, |
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| 75 | "pos_": "AUX", |
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| 76 | "norm_len": 3, |
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| 77 | "children": [], |
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| 78 | "is_superlative": false, |
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| 79 | "ent_iob_": "O", |
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| 80 | "is_wh": false, |
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| 81 | "is_ent": false, |
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| 82 | "tuis_": "", |
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| 83 | "tuis": "frozenset()", |
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| 84 | "tui_descs_": "", |
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| 85 | "is_concept": false, |
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| 86 | "detected_name_": "-<N>-", |
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| 87 | "cui": -1, |
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| 88 | "definition_": "-<N>-", |
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| 89 | "sub_names": [], |
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| 90 | "pref_name_": "-<N>-", |
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| 91 | "cui_": "-<N>-" |
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| 92 | }, |
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| 93 | { |
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| 94 | "shape": 13110060611322374290, |
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| 95 | "idx": 9, |
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| 96 | "ent": 0, |
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| 97 | "dep_": "ROOT", |
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| 98 | "lexspan": { |
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| 99 | "begin": 9, |
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| 100 | "end": 18 |
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| 101 | }, |
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| 102 | "is_stop": false, |
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| 103 | "tag_": "VBN", |
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| 104 | "i": 2, |
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| 105 | "lemma_": "diagnose", |
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| 106 | "ent_": "-<N>-", |
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| 107 | "is_punctuation": false, |
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| 108 | "shape_": "xxxx", |
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| 109 | "ent_iob": 0, |
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| 110 | "is_contraction": false, |
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| 111 | "i_sent": 2, |
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| 112 | "is_pronoun": false, |
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| 113 | "is_space": false, |
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| 114 | "sent_i": 0, |
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| 115 | "norm": "diagnosed", |
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| 116 | "tag": 3822385049556375858, |
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| 117 | "dep": 8206900633647566924, |
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| 118 | "pos_": "VERB", |
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| 119 | "norm_len": 9, |
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| 120 | "children": [ |
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| 121 | 0, |
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| 122 | 1, |
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| 123 | 3, |
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| 124 | 6 |
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| 125 | ], |
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| 126 | "is_superlative": false, |
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| 127 | "ent_iob_": "O", |
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| 128 | "is_wh": false, |
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| 129 | "is_ent": false, |
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| 130 | "tuis_": "", |
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| 131 | "tuis": "frozenset()", |
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| 132 | "tui_descs_": "", |
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| 133 | "is_concept": false, |
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| 134 | "detected_name_": "-<N>-", |
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| 135 | "cui": -1, |
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| 136 | "definition_": "-<N>-", |
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| 137 | "sub_names": [], |
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| 138 | "pref_name_": "-<N>-", |
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| 139 | "cui_": "-<N>-" |
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| 140 | }, |
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| 141 | { |
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| 142 | "shape": 13110060611322374290, |
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| 143 | "idx": 19, |
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| 144 | "ent": 0, |
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| 145 | "dep_": "prep", |
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| 146 | "lexspan": { |
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| 147 | "begin": 19, |
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| 148 | "end": 23 |
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| 149 | }, |
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| 150 | "is_stop": true, |
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| 151 | "tag_": "IN", |
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| 152 | "i": 3, |
||
| 153 | "lemma_": "with", |
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| 154 | "ent_": "-<N>-", |
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| 155 | "is_punctuation": false, |
||
| 156 | "shape_": "xxxx", |
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| 157 | "ent_iob": 0, |
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| 158 | "is_contraction": false, |
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| 159 | "i_sent": 3, |
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| 160 | "is_pronoun": false, |
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| 161 | "is_space": false, |
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| 162 | "sent_i": 0, |
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| 163 | "norm": "with", |
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| 164 | "tag": 1292078113972184607, |
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| 165 | "dep": 443, |
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| 166 | "pos_": "ADP", |
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| 167 | "norm_len": 4, |
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| 168 | "children": [ |
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| 169 | 5 |
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| 170 | ], |
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| 171 | "is_superlative": false, |
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| 172 | "ent_iob_": "O", |
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| 173 | "is_wh": false, |
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| 174 | "is_ent": false, |
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| 175 | "tuis_": "", |
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| 176 | "tuis": "frozenset()", |
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| 177 | "tui_descs_": "", |
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| 178 | "is_concept": false, |
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| 179 | "detected_name_": "-<N>-", |
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| 180 | "cui": -1, |
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| 181 | "definition_": "-<N>-", |
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| 182 | "sub_names": [], |
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| 183 | "pref_name_": "-<N>-", |
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| 184 | "cui_": "-<N>-" |
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| 185 | }, |
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| 186 | { |
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| 187 | "shape": 13110060611322374290, |
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| 188 | "idx": 24, |
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| 189 | "ent": 0, |
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| 190 | "dep_": "compound", |
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| 191 | "lexspan": { |
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| 192 | "begin": 24, |
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| 193 | "end": 30 |
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| 194 | }, |
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| 195 | "is_stop": false, |
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| 196 | "tag_": "NN", |
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| 197 | "i": 4, |
||
| 198 | "lemma_": "kidney", |
||
| 199 | "ent_": "-<N>-", |
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| 200 | "is_punctuation": false, |
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| 201 | "shape_": "xxxx", |
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| 202 | "ent_iob": 0, |
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| 203 | "is_contraction": false, |
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| 204 | "i_sent": 4, |
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| 205 | "is_pronoun": false, |
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| 206 | "is_space": false, |
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| 207 | "sent_i": 0, |
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| 208 | "norm": "kidney", |
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| 209 | "tag": 15308085513773655218, |
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| 210 | "dep": 7037928807040764755, |
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| 211 | "pos_": "NOUN", |
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| 212 | "norm_len": 6, |
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| 213 | "children": [], |
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| 214 | "is_superlative": false, |
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| 215 | "ent_iob_": "O", |
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| 216 | "is_wh": false, |
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| 217 | "is_ent": false, |
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| 218 | "tuis_": "T047", |
||
| 219 | "tuis": [ |
||
| 220 | "T047" |
||
| 221 | ], |
||
| 222 | "tui_descs_": "Disease or Syndrome", |
||
| 223 | "is_concept": true, |
||
| 224 | "detected_name_": "kidney~failure", |
||
| 225 | "cui": 35078, |
||
| 226 | "definition_": "-<N>-", |
||
| 227 | "sub_names": [ |
||
| 228 | "kidney~failure", |
||
| 229 | "renal~failure" |
||
| 230 | ], |
||
| 231 | "pref_name_": "Kidney Failure", |
||
| 232 | "cui_": "C0035078" |
||
| 233 | }, |
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| 234 | { |
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| 235 | "shape": 13110060611322374290, |
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| 236 | "idx": 31, |
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| 237 | "ent": 0, |
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| 238 | "dep_": "pobj", |
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| 239 | "lexspan": { |
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| 240 | "begin": 31, |
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| 241 | "end": 38 |
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| 242 | }, |
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| 243 | "is_stop": false, |
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| 244 | "tag_": "NN", |
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| 245 | "i": 5, |
||
| 246 | "lemma_": "failure", |
||
| 247 | "ent_": "-<N>-", |
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| 248 | "is_punctuation": false, |
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| 249 | "shape_": "xxxx", |
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| 250 | "ent_iob": 0, |
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| 251 | "is_contraction": false, |
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| 252 | "i_sent": 5, |
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| 253 | "is_pronoun": false, |
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| 254 | "is_space": false, |
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| 255 | "sent_i": 0, |
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| 256 | "norm": "failure", |
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| 257 | "tag": 15308085513773655218, |
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| 258 | "dep": 439, |
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| 259 | "pos_": "NOUN", |
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| 260 | "norm_len": 7, |
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| 261 | "children": [ |
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| 262 | 4 |
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| 263 | ], |
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| 264 | "is_superlative": false, |
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| 265 | "ent_iob_": "O", |
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| 266 | "is_wh": false, |
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| 267 | "is_ent": false, |
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| 268 | "tuis_": "T047", |
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| 269 | "tuis": [ |
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| 270 | "T047" |
||
| 271 | ], |
||
| 272 | "tui_descs_": "Disease or Syndrome", |
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| 273 | "is_concept": true, |
||
| 274 | "detected_name_": "kidney~failure", |
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| 275 | "cui": 35078, |
||
| 276 | "definition_": "-<N>-", |
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| 277 | "sub_names": [ |
||
| 278 | "kidney~failure", |
||
| 279 | "renal~failure" |
||
| 280 | ], |
||
| 281 | "pref_name_": "Kidney Failure", |
||
| 282 | "cui_": "C0035078" |
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| 283 | }, |
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| 284 | { |
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| 285 | "shape": 12646065887601541794, |
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| 286 | "idx": 38, |
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| 287 | "ent": 0, |
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| 288 | "dep_": "punct", |
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| 289 | "lexspan": { |
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| 290 | "begin": 38, |
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| 291 | "end": 39 |
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| 292 | }, |
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| 293 | "is_stop": false, |
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| 294 | "tag_": ".", |
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| 295 | "i": 6, |
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| 296 | "lemma_": ".", |
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| 297 | "ent_": "-<N>-", |
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| 298 | "is_punctuation": true, |
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| 299 | "shape_": ".", |
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| 300 | "ent_iob": 0, |
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| 301 | "is_contraction": false, |
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| 302 | "i_sent": 6, |
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| 303 | "is_pronoun": false, |
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| 304 | "is_space": false, |
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| 305 | "sent_i": 0, |
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| 306 | "norm": ".", |
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| 307 | "tag": 12646065887601541794, |
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| 308 | "dep": 445, |
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| 309 | "pos_": "PUNCT", |
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| 310 | "norm_len": 1, |
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| 311 | "children": [], |
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| 312 | "is_superlative": false, |
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| 313 | "ent_iob_": "O", |
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| 314 | "is_wh": false, |
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| 315 | "is_ent": false, |
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| 316 | "tuis_": "", |
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| 317 | "tuis": "frozenset()", |
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| 318 | "tui_descs_": "", |
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| 319 | "is_concept": false, |
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| 320 | "detected_name_": "-<N>-", |
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| 321 | "cui": -1, |
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| 322 | "definition_": "-<N>-", |
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| 323 | "sub_names": [], |
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| 324 | "pref_name_": "-<N>-", |
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| 325 | "cui_": "-<N>-" |
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| 326 | } |
||
| 327 | ] |
||
| 328 | }, |
||
| 329 | { |
||
| 330 | "text": "He has lung cancer too.", |
||
| 331 | "tokens": [ |
||
| 332 | { |
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| 333 | "shape": 12204527652707022206, |
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| 334 | "idx": 40, |
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| 335 | "ent": 0, |
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| 336 | "dep_": "nsubj", |
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| 337 | "lexspan": { |
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| 338 | "begin": 40, |
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| 339 | "end": 42 |
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| 340 | }, |
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| 341 | "is_stop": true, |
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| 342 | "tag_": "PRP", |
||
| 343 | "i": 7, |
||
| 344 | "lemma_": "he", |
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| 345 | "ent_": "-<N>-", |
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| 346 | "is_punctuation": false, |
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| 347 | "shape_": "Xx", |
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| 348 | "ent_iob": 0, |
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| 349 | "is_contraction": false, |
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| 350 | "i_sent": 0, |
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| 351 | "is_pronoun": true, |
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| 352 | "is_space": false, |
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| 353 | "sent_i": 1, |
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| 354 | "norm": "He", |
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| 355 | "tag": 13656873538139661788, |
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| 356 | "dep": 429, |
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| 357 | "pos_": "PRON", |
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| 358 | "norm_len": 2, |
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| 359 | "children": [], |
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| 360 | "is_superlative": false, |
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| 361 | "ent_iob_": "O", |
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| 362 | "is_wh": false, |
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| 363 | "is_ent": false, |
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| 364 | "tuis_": "", |
||
| 365 | "tuis": "frozenset()", |
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| 366 | "tui_descs_": "", |
||
| 367 | "is_concept": false, |
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| 368 | "detected_name_": "-<N>-", |
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| 369 | "cui": -1, |
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| 370 | "definition_": "-<N>-", |
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| 371 | "sub_names": [], |
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| 372 | "pref_name_": "-<N>-", |
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| 373 | "cui_": "-<N>-" |
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| 374 | }, |
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| 375 | { |
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| 376 | "shape": 4088098365541558500, |
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| 377 | "idx": 43, |
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| 378 | "ent": 0, |
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| 379 | "dep_": "ROOT", |
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| 380 | "lexspan": { |
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| 381 | "begin": 43, |
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| 382 | "end": 46 |
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| 383 | }, |
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| 384 | "is_stop": true, |
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| 385 | "tag_": "VBZ", |
||
| 386 | "i": 8, |
||
| 387 | "lemma_": "have", |
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| 388 | "ent_": "-<N>-", |
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| 389 | "is_punctuation": false, |
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| 390 | "shape_": "xxx", |
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| 391 | "ent_iob": 0, |
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| 392 | "is_contraction": false, |
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| 393 | "i_sent": 1, |
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| 394 | "is_pronoun": false, |
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| 395 | "is_space": false, |
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| 396 | "sent_i": 1, |
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| 397 | "norm": "has", |
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| 398 | "tag": 13927759927860985106, |
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| 399 | "dep": 8206900633647566924, |
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| 400 | "pos_": "VERB", |
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| 401 | "norm_len": 3, |
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| 402 | "children": [ |
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| 403 | 7, |
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| 404 | 10, |
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| 405 | 11, |
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| 406 | 12 |
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| 407 | ], |
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| 408 | "is_superlative": false, |
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| 409 | "ent_iob_": "O", |
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| 410 | "is_wh": false, |
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| 411 | "is_ent": false, |
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| 412 | "tuis_": "", |
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| 413 | "tuis": "frozenset()", |
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| 414 | "tui_descs_": "", |
||
| 415 | "is_concept": false, |
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| 416 | "detected_name_": "-<N>-", |
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| 417 | "cui": -1, |
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| 418 | "definition_": "-<N>-", |
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| 419 | "sub_names": [], |
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| 420 | "pref_name_": "-<N>-", |
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| 421 | "cui_": "-<N>-" |
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| 422 | }, |
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| 423 | { |
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| 424 | "shape": 13110060611322374290, |
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| 425 | "idx": 47, |
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| 426 | "ent": 0, |
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| 427 | "dep_": "compound", |
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| 428 | "lexspan": { |
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| 429 | "begin": 47, |
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| 430 | "end": 51 |
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| 431 | }, |
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| 432 | "is_stop": false, |
||
| 433 | "tag_": "NN", |
||
| 434 | "i": 9, |
||
| 435 | "lemma_": "lung", |
||
| 436 | "ent_": "-<N>-", |
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| 437 | "is_punctuation": false, |
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| 438 | "shape_": "xxxx", |
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| 439 | "ent_iob": 0, |
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| 440 | "is_contraction": false, |
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| 441 | "i_sent": 2, |
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| 442 | "is_pronoun": false, |
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| 443 | "is_space": false, |
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| 444 | "sent_i": 1, |
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| 445 | "norm": "lung", |
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| 446 | "tag": 15308085513773655218, |
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| 447 | "dep": 7037928807040764755, |
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| 448 | "pos_": "NOUN", |
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| 449 | "norm_len": 4, |
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| 450 | "children": [], |
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| 451 | "is_superlative": false, |
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| 452 | "ent_iob_": "O", |
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| 453 | "is_wh": false, |
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| 454 | "is_ent": false, |
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| 455 | "tuis_": "", |
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| 456 | "tuis": "frozenset()", |
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| 457 | "tui_descs_": "", |
||
| 458 | "is_concept": false, |
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| 459 | "detected_name_": "-<N>-", |
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| 460 | "cui": -1, |
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| 461 | "definition_": "-<N>-", |
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| 462 | "sub_names": [], |
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| 463 | "pref_name_": "-<N>-", |
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| 464 | "cui_": "-<N>-" |
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| 465 | }, |
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| 466 | { |
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| 467 | "shape": 13110060611322374290, |
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| 468 | "idx": 52, |
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| 469 | "ent": 0, |
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| 470 | "dep_": "dobj", |
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| 471 | "lexspan": { |
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| 472 | "begin": 52, |
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| 473 | "end": 58 |
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| 474 | }, |
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| 475 | "is_stop": false, |
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| 476 | "tag_": "NN", |
||
| 477 | "i": 10, |
||
| 478 | "lemma_": "cancer", |
||
| 479 | "ent_": "-<N>-", |
||
| 480 | "is_punctuation": false, |
||
| 481 | "shape_": "xxxx", |
||
| 482 | "ent_iob": 0, |
||
| 483 | "is_contraction": false, |
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| 484 | "i_sent": 3, |
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| 485 | "is_pronoun": false, |
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| 486 | "is_space": false, |
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| 487 | "sent_i": 1, |
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| 488 | "norm": "cancer", |
||
| 489 | "tag": 15308085513773655218, |
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| 490 | "dep": 416, |
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| 491 | "pos_": "NOUN", |
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| 492 | "norm_len": 6, |
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| 493 | "children": [ |
||
| 494 | 9 |
||
| 495 | ], |
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| 496 | "is_superlative": false, |
||
| 497 | "ent_iob_": "O", |
||
| 498 | "is_wh": false, |
||
| 499 | "is_ent": false, |
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| 500 | "tuis_": "", |
||
| 501 | "tuis": "frozenset()", |
||
| 502 | "tui_descs_": "", |
||
| 503 | "is_concept": false, |
||
| 504 | "detected_name_": "-<N>-", |
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| 505 | "cui": -1, |
||
| 506 | "definition_": "-<N>-", |
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| 507 | "sub_names": [], |
||
| 508 | "pref_name_": "-<N>-", |
||
| 509 | "cui_": "-<N>-" |
||
| 510 | }, |
||
| 511 | { |
||
| 512 | "shape": 4088098365541558500, |
||
| 513 | "idx": 59, |
||
| 514 | "ent": 0, |
||
| 515 | "dep_": "advmod", |
||
| 516 | "lexspan": { |
||
| 517 | "begin": 59, |
||
| 518 | "end": 62 |
||
| 519 | }, |
||
| 520 | "is_stop": true, |
||
| 521 | "tag_": "RB", |
||
| 522 | "i": 11, |
||
| 523 | "lemma_": "too", |
||
| 524 | "ent_": "-<N>-", |
||
| 525 | "is_punctuation": false, |
||
| 526 | "shape_": "xxx", |
||
| 527 | "ent_iob": 0, |
||
| 528 | "is_contraction": false, |
||
| 529 | "i_sent": 4, |
||
| 530 | "is_pronoun": false, |
||
| 531 | "is_space": false, |
||
| 532 | "sent_i": 1, |
||
| 533 | "norm": "too", |
||
| 534 | "tag": 164681854541413346, |
||
| 535 | "dep": 400, |
||
| 536 | "pos_": "ADV", |
||
| 537 | "norm_len": 3, |
||
| 538 | "children": [], |
||
| 539 | "is_superlative": false, |
||
| 540 | "ent_iob_": "O", |
||
| 541 | "is_wh": false, |
||
| 542 | "is_ent": false, |
||
| 543 | "tuis_": "", |
||
| 544 | "tuis": "frozenset()", |
||
| 545 | "tui_descs_": "", |
||
| 546 | "is_concept": false, |
||
| 547 | "detected_name_": "-<N>-", |
||
| 548 | "cui": -1, |
||
| 549 | "definition_": "-<N>-", |
||
| 550 | "sub_names": [], |
||
| 551 | "pref_name_": "-<N>-", |
||
| 552 | "cui_": "-<N>-" |
||
| 553 | }, |
||
| 554 | { |
||
| 555 | "shape": 12646065887601541794, |
||
| 556 | "idx": 62, |
||
| 557 | "ent": 0, |
||
| 558 | "dep_": "punct", |
||
| 559 | "lexspan": { |
||
| 560 | "begin": 62, |
||
| 561 | "end": 63 |
||
| 562 | }, |
||
| 563 | "is_stop": false, |
||
| 564 | "tag_": ".", |
||
| 565 | "i": 12, |
||
| 566 | "lemma_": ".", |
||
| 567 | "ent_": "-<N>-", |
||
| 568 | "is_punctuation": true, |
||
| 569 | "shape_": ".", |
||
| 570 | "ent_iob": 0, |
||
| 571 | "is_contraction": false, |
||
| 572 | "i_sent": 5, |
||
| 573 | "is_pronoun": false, |
||
| 574 | "is_space": false, |
||
| 575 | "sent_i": 1, |
||
| 576 | "norm": ".", |
||
| 577 | "tag": 12646065887601541794, |
||
| 578 | "dep": 445, |
||
| 579 | "pos_": "PUNCT", |
||
| 580 | "norm_len": 1, |
||
| 581 | "children": [], |
||
| 582 | "is_superlative": false, |
||
| 583 | "ent_iob_": "O", |
||
| 584 | "is_wh": false, |
||
| 585 | "is_ent": false, |
||
| 586 | "tuis_": "", |
||
| 587 | "tuis": "frozenset()", |
||
| 588 | "tui_descs_": "", |
||
| 589 | "is_concept": false, |
||
| 590 | "detected_name_": "-<N>-", |
||
| 591 | "cui": -1, |
||
| 592 | "definition_": "-<N>-", |
||
| 593 | "sub_names": [], |
||
| 594 | "pref_name_": "-<N>-", |
||
| 595 | "cui_": "-<N>-" |
||
| 596 | } |
||
| 597 | ] |
||
| 598 | } |
||
| 599 | ] |
||
| 600 | } |