--- a +++ b/resources/ctakes.conf @@ -0,0 +1,8 @@ +## ctakes.conf - configuration for the easy to use cTAKES Python bridge + +[ctakes_parser_stash] +class_name = zensols.mednlp.ctakes.CTakesParserStash +home = path: ${ctakes:home} +entry_point_bin = path: ${ctakes:home}/bin/runClinicalPipeline.sh +entry_point_cmd = {entry_point_bin} -i {source_dir} --xmiOut {output_dir} --key ${uts:api_key} +source_dir = path: ${ctakes:source_dir}