Diff of /setup.py [000000] .. [6c353a]

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+import sys
+
+from setuptools import setup, find_packages
+from setuptools.command.test import test as TestCommand
+
+from medacy import __version__, __authors__
+
+packages = find_packages()
+
+
+def readme():
+    with open('README.md') as f:
+        return f.read()
+
+
+class PyTest(TestCommand):
+    """
+    Custom Test Configuration Class
+    Read here for details: https://docs.pytest.org/en/latest/goodpractices.html
+    """
+    user_options = [("pytest-args=", "a", "Arguments to pass to pytest")]
+
+    def initialize_options(self):
+        TestCommand.initialize_options(self)
+        self.pytest_args = "--cov-config .coveragerc --cov-report html --cov-report term --cov=medacy"
+
+    def run_tests(self):
+        import shlex
+        # import here, cause outside the eggs aren't loaded
+        import pytest
+
+        errno = pytest.main(shlex.split(self.pytest_args))
+        sys.exit(errno)
+
+setup(
+    name='medacy',
+    version=__version__,
+    python_requires='>=3.6',
+    license='GNU GENERAL PUBLIC LICENSE',
+    description='Medical Natural Language Processing (NLP) with spaCy',
+    long_description=readme(),
+    packages=packages,
+    url='https://github.com/NLPatVCU/medaCy',
+    author=__authors__,
+    keywords='natural-language-processing medical-natural-language-processing machine-learning nlp-library metamap clinical-text-processing',
+    classifiers=[
+        'Status :: 4 - Beta',
+        'License :: OSI Approved :: GNU General Public License (GPL)',
+        'Programming Language :: Python :: 3.7',
+        'Natural Language :: English',
+        'Topic :: Text Processing :: Linguistic',
+        'Intended Audience :: Science/Research'
+    ],
+    dependency_links=[
+        'https://github.com/explosion/spacy-models/releases//tag/en_core_web_sm-2.2.5'
+    ],
+    install_requires=[
+        'spacy==2.2.2',
+        'scispacy==0.2.2',
+        'scikit-learn>=0.20.0',
+        'torch>=1.2.0',
+        'pytorch-crf==0.7.2',
+        'numpy>=1.16.1',
+        'transformers==2.3.0',
+        'sklearn-crfsuite',
+        'xmltodict>=0.11.0',
+        'joblib>=0.12.5',
+        'tabulate>=0.8.2',
+        'pathos>=0.2.2.1',
+        'msgpack>=0.3.0,<0.6',
+        'msgpack-numpy<0.4.4.0',
+        'gensim==3.8.0',
+        'en_core_web_sm @ https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-2.2.5/en_core_web_sm-2.2.5.tar.gz'
+    ],
+    extras_require={
+        ':python_version == "3.6"': [
+            'dataclasses',
+        ],
+    },
+    tests_require=[
+        "pytest",
+        "pytest-cov",
+    ],
+    cmdclass={"pytest": PyTest},
+    include_package_data=True,
+    zip_safe=False
+)