--- a
+++ b/.github/workflows/run_notebooks.yml
@@ -0,0 +1,40 @@
+name: Run Notebooks
+
+on:
+    - pull_request
+
+jobs:
+    run:
+        runs-on: ubuntu-latest
+        strategy:
+            matrix:
+                notebook: [
+                        "docs/tutorials/notebooks/ehrapy_introduction.ipynb",
+                        "docs/tutorials/notebooks/mimic_2_introduction.ipynb",
+                        "docs/tutorials/notebooks/mimic_2_survival_analysis.ipynb",
+                        # "docs/tutorials/notebooks/mimic_2_fate.ipynb",  # https://github.com/theislab/cellrank/issues/1235
+                        "docs/tutorials/notebooks/mimic_2_causal_inference.ipynb",
+                        # "docs/tutorials/notebooks/mimic_3_demo.ipynb",
+                        # "docs/tutorials/notebooks/medcat.ipynb",
+                    ]
+        steps:
+            - uses: actions/checkout@v4
+              with:
+                  submodules: "true"
+                  token: "${{ secrets.CT_SYNC_TOKEN }}"
+            - name: Set up Python
+              uses: actions/setup-python@v5
+              with:
+                  python-version: "3.13"
+
+            - name: Install UV
+              run: pip install uv
+
+            - name: Install ehrapy and additional dependencies
+              run: uv pip install --system . cellrank nbconvert ipykernel graphviz
+
+            - name: Install scvelo from Github
+              run: uv pip install --system git+https://github.com/theislab/scvelo.git
+
+            - name: Run ${{ matrix.notebook }} Notebook
+              run: jupyter nbconvert --to notebook --execute ${{ matrix.notebook }}