{

 "cells": [

  {

   "cell_type": "code",

   "execution_count": 1,

   "id": "36f07a16",

   "metadata": {},

   "outputs": [

    {

     "name": "stderr",

     "output_type": "stream",

     "text": [

      "[nltk_data] Error loading punkt: <urlopen error [SSL:\n",

      "[nltk_data]     CERTIFICATE_VERIFY_FAILED] certificate verify failed:\n",

      "[nltk_data]     unable to get local issuer certificate (_ssl.c:1131)>\n",

      "[nltk_data] Error loading stopwords: <urlopen error [SSL:\n",

      "[nltk_data]     CERTIFICATE_VERIFY_FAILED] certificate verify failed:\n",

      "[nltk_data]     unable to get local issuer certificate (_ssl.c:1131)>\n"

     ]

    }

   ],

   "source": [

    "import sys\n",

    "sys.path.append('../scripts')\n",

    "from predict import NER"

   ]

  },

  {

   "cell_type": "code",

   "execution_count": 2,

   "id": "0343fbb3",

   "metadata": {},

   "outputs": [

    {

     "name": "stdout",

     "output_type": "stream",

     "text": [

      "Model provided:  Bidirectional LSTM Model with single LSTM layer\n"

     ]

    },

    {

     "name": "stderr",

     "output_type": "stream",

     "text": [

      "2023-04-10 10:34:04.285190: W tensorflow/core/platform/profile_utils/cpu_utils.cc:128] Failed to get CPU frequency: 0 Hz\n"

     ]

    },

    {

     "name": "stdout",

     "output_type": "stream",

     "text": [

      "1/1 [==============================] - 0s 422ms/step\n",

      "Predicted Named Entities:\n",

      "57: Age\n",

      "year: Age\n",

      "old: Age\n",

      "man: Sex\n",

      "presented: Nonbiological_location\n",

      "emergency: Nonbiological_location\n",

      "department: Duration\n",

      "2: Duration\n",

      "day: O\n",

      "history: Sign_symptom\n",

      "worsening: Sign_symptom\n",

      "shortness: Biological_structure\n",

      "breath: Sign_symptom\n",

      "chest: History\n",

      "pain: History\n",

      "reported: History\n",

      "recent: History\n",

      "travel: History\n",

      "sick: History\n",

      "contacts: History\n",

      "medical: History\n",

      "history: History\n",

      "significant: History\n",

      "hypertension: History\n",

      "dyslipidemia: History\n",

      "type: History\n",

      "2: Sign_symptom\n",

      "diabetes: History\n",

      "mellitus: Diagnostic_procedure\n",

      "examination: O\n",

      "tachycardic: Detailed_description\n",

      "tachypneic: Detailed_description\n",

      "oxygen: Biological_structure\n",

      "saturation: Diagnostic_procedure\n",

      "88: Detailed_description\n",

      "room: O\n",

      "air: Distance\n",

      "chest: Distance\n",

      "radiography: O\n",

      "revealed: Distance\n",

      "bilateral: O\n",

      "opacities: O\n",

      "consistent: O\n",

      "pulmonary: Detailed_description\n",

      "edema: Distance\n",

      "patient: Distance\n",

      "admitted: Distance\n",

      "intensive: Medication\n",

      "care: Therapeutic_procedure\n",

      "unit: Medication\n",

      "management: Dosage\n",

      "acute: Dosage\n",

      "decompensated: Dosage\n",

      "heart: Clinical_event\n",

      "failure: Other_entity\n",

      "started: Nonbiological_location\n",

      "intravenous: Date\n",

      "diuretics: Date\n",

      "inotropic: O\n",

      "support: O\n",

      "dobutamine: O\n",

      "next: O\n",

      "several: O\n",

      "days: O\n",

      "symptoms: O\n",

      "improved: O\n",

      "discharged: O\n",

      "home: O\n",

      "instructions: O\n",

      "follow: O\n",

      "primary: O\n",

      "care: O\n",

      "provider: O\n",

      "1: O\n",

      "week: O\n"

     ]

    },

    {

     "data": {

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       "<span class=\"tex2jax_ignore\"><div class=\"entities\" style=\"line-height: 2.5; direction: ltr\">A \n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    57\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

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       "-\n",

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       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

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       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

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       "    man\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sex</span>\n",

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       " with a \n",

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       "    2\n",

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       "-day \n",

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       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

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       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    worsening\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

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       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    shortness\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

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       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    breath\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

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       " and \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    chest\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

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       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pain\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ". He \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    reported\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " no \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    recent\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    travel\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " or \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    sick\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

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       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    contacts\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

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       "    medical\n",

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       " \n",

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       "    history\n",

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       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    significant\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " for \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    hypertension\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ", \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    dyslipidemia\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ", and \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    type\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    2\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    diabetes\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    mellitus\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       ". On examination, he was \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachycardic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       " and \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachypneic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       ", with \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    oxygen\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    saturation\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    88\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       "% on room \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    air\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       ". \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    Chest\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       " radiography \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    revealed\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       " bilateral opacities consistent with \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pulmonary\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    edema\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       ". The \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    patient\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       " was \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    admitted\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       " to the \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    intensive\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e6ccb2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    care\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Therapeutic_procedure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    unit\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " for \n",

       "<mark class=\"entity\" style=\"background: #b9e8d8; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    management\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Dosage</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #b9e8d8; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    acute\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Dosage</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #b9e8d8; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    decompensated\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Dosage</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #77c5d5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    heart\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Clinical_event</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #d5f5e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    failure\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Other_entity</span>\n",

       "</mark>\n",

       ". He was \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    started\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " on \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    intravenous\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    diuretics\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       " and inotropic support with dobutamine. Over the next several days, his symptoms improved and he was discharged to home with instructions to follow up with his primary care provider in 1 week.</div></span>"

      ],

      "text/plain": [

       "<IPython.core.display.HTML object>"

      ]

     },

     "metadata": {},

     "output_type": "display_data"

    }

   ],

   "source": [

    "NER(\"model_1\",\n",

    "        \"A 57-year-old man presented to the emergency department with a 2-day history of worsening shortness of breath and chest pain. He reported no recent travel or sick contacts. His medical history was significant for hypertension, dyslipidemia, and type 2 diabetes mellitus. On examination, he was tachycardic and tachypneic, with oxygen saturation of 88% on room air. Chest radiography revealed bilateral opacities consistent with pulmonary edema. The patient was admitted to the intensive care unit for management of acute decompensated heart failure. He was started on intravenous diuretics and inotropic support with dobutamine. Over the next several days, his symptoms improved and he was discharged to home with instructions to follow up with his primary care provider in 1 week.\")"

   ]

  },

  {

   "cell_type": "markdown",

   "id": "d8b3b880",

   "metadata": {},

   "source": [

    "## MODEL 2"

   ]

  },

  {

   "cell_type": "code",

   "execution_count": 3,

   "id": "27ca7748",

   "metadata": {},

   "outputs": [

    {

     "name": "stdout",

     "output_type": "stream",

     "text": [

      "Model provided:  Bidirectional LSTM Model with two LSTM layers and one Hidden Dense Layer\n",

      "1/1 [==============================] - 1s 651ms/step\n",

      "Predicted Named Entities:\n",

      "57: Age\n",

      "year: Age\n",

      "old: Age\n",

      "man: Sex\n",

      "presented: Nonbiological_location\n",

      "emergency: Nonbiological_location\n",

      "department: History\n",

      "2: Date\n",

      "day: O\n",

      "history: Sign_symptom\n",

      "worsening: Sign_symptom\n",

      "shortness: Biological_structure\n",

      "breath: Sign_symptom\n",

      "chest: O\n",

      "pain: Nonbiological_location\n",

      "reported: History\n",

      "recent: History\n",

      "travel: History\n",

      "sick: History\n",

      "contacts: History\n",

      "medical: Nonbiological_location\n",

      "history: Nonbiological_location\n",

      "significant: History\n",

      "hypertension: Nonbiological_location\n",

      "dyslipidemia: Nonbiological_location\n",

      "type: Nonbiological_location\n",

      "2: Biological_structure\n",

      "diabetes: Diagnostic_procedure\n",

      "mellitus: Diagnostic_procedure\n",

      "examination: Lab_value\n",

      "tachycardic: Detailed_description\n",

      "tachypneic: Detailed_description\n",

      "oxygen: Biological_structure\n",

      "saturation: Diagnostic_procedure\n",

      "88: Detailed_description\n",

      "room: O\n",

      "air: Biological_structure\n",

      "chest: Sign_symptom\n",

      "radiography: O\n",

      "revealed: Biological_structure\n",

      "bilateral: Biological_structure\n",

      "opacities: Biological_structure\n",

      "consistent: O\n",

      "pulmonary: Detailed_description\n",

      "edema: Distance\n",

      "patient: Therapeutic_procedure\n",

      "admitted: Medication\n",

      "intensive: Medication\n",

      "care: Medication\n",

      "unit: Medication\n",

      "management: Dosage\n",

      "acute: Dosage\n",

      "decompensated: History\n",

      "heart: Date\n",

      "failure: Nonbiological_location\n",

      "started: History\n",

      "intravenous: History\n",

      "diuretics: Duration\n",

      "inotropic: O\n",

      "support: O\n",

      "dobutamine: O\n",

      "next: O\n",

      "several: O\n",

      "days: O\n",

      "symptoms: O\n",

      "improved: O\n",

      "discharged: O\n",

      "home: O\n",

      "instructions: O\n",

      "follow: O\n",

      "primary: O\n",

      "care: O\n",

      "provider: O\n",

      "1: O\n",

      "week: O\n"

     ]

    },

    {

     "data": {

      "text/html": [

       "<span class=\"tex2jax_ignore\"><div class=\"entities\" style=\"line-height: 2.5; direction: ltr\">A \n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    57\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       "-\n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    year\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       "-\n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    old\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    man\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sex</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    presented\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " to the \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    emergency\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    department\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " with a \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    2\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       "-day \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    history\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    worsening\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    shortness\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    breath\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " and chest \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pain\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       ". He \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    reported\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " no \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    recent\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    travel\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " or \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    sick\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    contacts\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ". His \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    medical\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    history\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " was \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    significant\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " for \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    hypertension\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       ", \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    dyslipidemia\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       ", and \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    type\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    2\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    diabetes\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    mellitus\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       ". On \n",

       "<mark class=\"entity\" style=\"background: #f4b3c2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    examination\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Lab_value</span>\n",

       "</mark>\n",

       ", he was \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachycardic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       " and \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachypneic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       ", with \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    oxygen\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    saturation\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    88\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       "% on room \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    air\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       ". \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    Chest\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " radiography \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    revealed\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    bilateral\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    opacities\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " consistent with \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pulmonary\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    edema\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       ". The \n",

       "<mark class=\"entity\" style=\"background: #e6ccb2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    patient\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Therapeutic_procedure</span>\n",

       "</mark>\n",

       " was \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    admitted\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " to the \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    intensive\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    care\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    unit\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " for \n",

       "<mark class=\"entity\" style=\"background: #b9e8d8; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    management\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Dosage</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #b9e8d8; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    acute\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Dosage</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    decompensated\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    heart\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    failure\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       ". He was \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    started\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " on \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    intravenous\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #ffdfba; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    diuretics\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Duration</span>\n",

       "</mark>\n",

       " and inotropic support with dobutamine. Over the next several days, his symptoms improved and he was discharged to home with instructions to follow up with his primary care provider in 1 week.</div></span>"

      ],

      "text/plain": [

       "<IPython.core.display.HTML object>"

      ]

     },

     "metadata": {},

     "output_type": "display_data"

    }

   ],

   "source": [

    "NER(\"model_2\",\n",

    "        \"A 57-year-old man presented to the emergency department with a 2-day history of worsening shortness of breath and chest pain. He reported no recent travel or sick contacts. His medical history was significant for hypertension, dyslipidemia, and type 2 diabetes mellitus. On examination, he was tachycardic and tachypneic, with oxygen saturation of 88% on room air. Chest radiography revealed bilateral opacities consistent with pulmonary edema. The patient was admitted to the intensive care unit for management of acute decompensated heart failure. He was started on intravenous diuretics and inotropic support with dobutamine. Over the next several days, his symptoms improved and he was discharged to home with instructions to follow up with his primary care provider in 1 week.\")"

   ]

  },

  {

   "cell_type": "markdown",

   "id": "d0f9b03d",

   "metadata": {},

   "source": [

    "## MODEL 3"

   ]

  },

  {

   "cell_type": "code",

   "execution_count": 4,

   "id": "e3fb5de6",

   "metadata": {},

   "outputs": [

    {

     "name": "stdout",

     "output_type": "stream",

     "text": [

      "Model provided:  Bidirectional LSTM model with BioWordVecEmbedding Layers followed two LSTM layers and one Hidden Dense Layer\n",

      "1/1 [==============================] - 1s 616ms/step\n",

      "Predicted Named Entities:\n",

      "57: Age\n",

      "year: Age\n",

      "old: Age\n",

      "man: Sex\n",

      "presented: Nonbiological_location\n",

      "emergency: Nonbiological_location\n",

      "department: Date\n",

      "2: Duration\n",

      "day: O\n",

      "history: Sign_symptom\n",

      "worsening: Sign_symptom\n",

      "shortness: Biological_structure\n",

      "breath: Sign_symptom\n",

      "chest: O\n",

      "pain: History\n",

      "reported: History\n",

      "recent: History\n",

      "travel: O\n",

      "sick: History\n",

      "contacts: History\n",

      "medical: History\n",

      "history: History\n",

      "significant: History\n",

      "hypertension: History\n",

      "dyslipidemia: History\n",

      "type: O\n",

      "2: Sign_symptom\n",

      "diabetes: Diagnostic_procedure\n",

      "mellitus: Diagnostic_procedure\n",

      "examination: Date\n",

      "tachycardic: History\n",

      "tachypneic: Detailed_description\n",

      "oxygen: Biological_structure\n",

      "saturation: Diagnostic_procedure\n",

      "88: Detailed_description\n",

      "room: O\n",

      "air: Distance\n",

      "chest: Sign_symptom\n",

      "radiography: O\n",

      "revealed: Nonbiological_location\n",

      "bilateral: Nonbiological_location\n",

      "opacities: Nonbiological_location\n",

      "consistent: O\n",

      "pulmonary: Detailed_description\n",

      "edema: Distance\n",

      "patient: Distance\n",

      "admitted: Administration\n",

      "intensive: Medication\n",

      "care: Medication\n",

      "unit: Medication\n",

      "management: O\n",

      "acute: Clinical_event\n",

      "decompensated: Nonbiological_location\n",

      "heart: Clinical_event\n",

      "failure: Nonbiological_location\n",

      "started: Nonbiological_location\n",

      "intravenous: Date\n",

      "diuretics: Duration\n",

      "inotropic: O\n",

      "support: O\n",

      "dobutamine: O\n",

      "next: O\n",

      "several: O\n",

      "days: O\n",

      "symptoms: O\n",

      "improved: O\n",

      "discharged: O\n",

      "home: O\n",

      "instructions: O\n",

      "follow: O\n",

      "primary: O\n",

      "care: O\n",

      "provider: O\n",

      "1: O\n",

      "week: O\n"

     ]

    },

    {

     "data": {

      "text/html": [

       "<span class=\"tex2jax_ignore\"><div class=\"entities\" style=\"line-height: 2.5; direction: ltr\">A \n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    57\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       "-\n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    year\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       "-\n",

       "<mark class=\"entity\" style=\"background: #f6c3d0; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    old\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Age</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    man\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sex</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    presented\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " to the \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    emergency\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    department\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       " with a \n",

       "<mark class=\"entity\" style=\"background: #ffdfba; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    2\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Duration</span>\n",

       "</mark>\n",

       "-day \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    history\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    worsening\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    shortness\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    breath\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " and chest \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pain\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ". He \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    reported\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " no \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    recent\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " travel or \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    sick\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    contacts\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ". His \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    medical\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    history\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " was \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    significant\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " for \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    hypertension\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ", \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    dyslipidemia\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       ", and type \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    2\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    diabetes\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    mellitus\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       ". On \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    examination\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Date</span>\n",

       "</mark>\n",

       ", he was \n",

       "<mark class=\"entity\" style=\"background: #e2f0cb; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachycardic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">History</span>\n",

       "</mark>\n",

       " and \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    tachypneic\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       ", with \n",

       "<mark class=\"entity\" style=\"background: #9ddfd3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    oxygen\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Biological_structure</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #c5b4e3; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    saturation\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Diagnostic_procedure</span>\n",

       "</mark>\n",

       " of \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    88\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       "% on room \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    air\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       ". \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    Chest\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Sign_symptom</span>\n",

       "</mark>\n",

       " radiography \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    revealed\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    bilateral\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    opacities\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " consistent with \n",

       "<mark class=\"entity\" style=\"background: #ffb347; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    pulmonary\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Detailed_description</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    edema\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       ". The \n",

       "<mark class=\"entity\" style=\"background: #bde0fe; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    patient\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Distance</span>\n",

       "</mark>\n",

       " was \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    admitted\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Administration</span>\n",

       "</mark>\n",

       " to the \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    intensive\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    care\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f9d5e5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    unit\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Medication</span>\n",

       "</mark>\n",

       " for management of \n",

       "<mark class=\"entity\" style=\"background: #77c5d5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    acute\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Clinical_event</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    decompensated\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #77c5d5; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    heart\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Clinical_event</span>\n",

       "</mark>\n",

       " \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    failure\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       ". He was \n",

       "<mark class=\"entity\" style=\"background: #f7a399; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",

       "    started\n",

       "    <span style=\"font-size: 0.8em; font-weight: bold; line-height: 1; border-radius: 0.35em; vertical-align: middle; margin-left: 0.5rem\">Nonbiological_location</span>\n",

       "</mark>\n",

       " on \n",

       "<mark class=\"entity\" style=\"background: #f1f0d2; padding: 0.45em 0.6em; margin: 0 0.25em; line-height: 1; border-radius: 0.35em;\">\n",