[project]

name = "merlin-vlm"

version = "0.0.2"

requires-python = "==3.9"

description = "Merlin: A Vision Language Foundation Model for 3D Computed Tomography"

readme = "README.md"

license = { file = "LICENSE" }

authors = [

    { name = "Louis Blankemeier", email = "louis.blankemeier@stanford.edu"},

    { name = "Ashwin Kumar", email = "akkumar@stanford.edu"},

    { name = "Stanford Machine Intelligence for Medical Imaging (MIMI)" }

]

classifiers = [

    "Development Status :: 5 - Production/Stable",

    "Intended Audience :: Developers",

    "Intended Audience :: Science/Research",

    "Intended Audience :: Healthcare Industry",

    "Programming Language :: Python :: 3",

    "License :: OSI Approved :: MIT License",

    "Topic :: Scientific/Engineering :: Artificial Intelligence",

    "Topic :: Scientific/Engineering :: Medical Science Apps.",

]

dependencies = [

    "numpy==1.26.4",

    "torch==2.1.2",

    "monai==1.3.0", 

    "huggingface_hub", # tested with 0.30.1

    "transformers==4.38.2",

    "torchvision==0.16.2",

    "nibabel", # tested with 5.3.2

    "nltk", # tested with 3.9.1

]

[project.urls]

homepage = "https://github.com/StanfordMIMI/Merlin"

repository = "https://github.com/StanfordMIMI/Merlin"

[project.optional-dependencies]

dev = [

    "ruff",

    "pre-commit",

    "mdformat"

]

[build-system]

requires = ["setuptools>=67.8.0"]

build-backend = "setuptools.build_meta"

[tool.setuptools.packages.find]

include = ["merlin", "merlin.data", "merlin.models", "merlin.utils"]

exclude = ["documentation"]

[tool.codespell]

skip = '.git,*.pdf,*.svg, *.png'