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a b/overview/calibration-plots.R
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source('../lib/handymedical.R', chdir = TRUE)
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requirePlus('ggplot2', 'cowplot')
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cox.calibration <-
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  read.csv('../../output/cox-bigdata-varsellogrank-01-calibration-table.csv')
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rf.calibration <-
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  read.csv('../../output/rfsrc-cv-nsplit-try3-calibration-table.csv')
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cox.calibration.plot <- calibrationPlot(cox.calibration, max.points = 2000)
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rf.calibration.plot <- calibrationPlot(rf.calibration, max.points = 2000)
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plot_grid(
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  cox.calibration.plot, rf.calibration.plot,
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  labels = c("C", ""),
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  align = "v", ncol = 2
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)
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ggsave(
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  '../../output/models-calibration-eg.pdf',
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  width = 16,
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  height = 8,
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  units = 'cm',
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  useDingbats = FALSE
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)