Keras implementation of BERT modified for compatibility with TensorFlow 2.0
For extracting latent embeddings from medical question/answer data
Based on CyberZHG's Keras BERT implementation
Splits text and generates indices:
from keras_bert import Tokenizer
token_dict = {
'[CLS]': 0,
'[SEP]': 1,
'un': 2,
'##aff': 3,
'##able': 4,
'[UNK]': 5,
}
tokenizer = Tokenizer(token_dict)
print(tokenizer.tokenize('unaffable')) # The result should be `['[CLS]', 'un', '##aff', '##able', '[SEP]']`
indices, segments = tokenizer.encode('unaffable')
print(indices) # Should be `[0, 2, 3, 4, 1]`
print(segments) # Should be `[0, 0, 0, 0, 0]`
print(tokenizer.tokenize(first='unaffable', second='钢'))
# The result should be `['[CLS]', 'un', '##aff', '##able', '[SEP]', '钢', '[SEP]']`
indices, segments = tokenizer.encode(first='unaffable', second='钢', max_len=10)
print(indices) # Should be `[0, 2, 3, 4, 1, 5, 1, 0, 0, 0]`
print(segments) # Should be `[0, 0, 0, 0, 0, 1, 1, 1, 1, 1]`
from tensorflow import keras
from keras_bert import get_base_dict, get_model, gen_batch_inputs
# A toy input example
sentence_pairs = [
[['all', 'work', 'and', 'no', 'play'], ['makes', 'jack', 'a', 'dull', 'boy']],
[['from', 'the', 'day', 'forth'], ['my', 'arm', 'changed']],
[['and', 'a', 'voice', 'echoed'], ['power', 'give', 'me', 'more', 'power']],
]
# Build token dictionary
token_dict = get_base_dict() # A dict that contains some special tokens
for pairs in sentence_pairs:
for token in pairs[0] + pairs[1]:
if token not in token_dict:
token_dict[token] = len(token_dict)
token_list = list(token_dict.keys()) # Used for selecting a random word
# Build & train the model
model = get_model(
token_num=len(token_dict),
head_num=5,
transformer_num=12,
embed_dim=25,
feed_forward_dim=100,
seq_len=20,
pos_num=20,
dropout_rate=0.05,
)
model.summary()
def _generator():
while True:
yield gen_batch_inputs(
sentence_pairs,
token_dict,
token_list,
seq_len=20,
mask_rate=0.3,
swap_sentence_rate=1.0,
)
model.fit_generator(
generator=_generator(),
steps_per_epoch=1000,
epochs=100,
validation_data=_generator(),
validation_steps=100,
callbacks=[
keras.callbacks.EarlyStopping(monitor='val_loss', patience=5)
],
)
# Use the trained model
inputs, output_layer = get_model( # `output_layer` is the last feature extraction layer (the last transformer)
token_num=len(token_dict),
head_num=5,
transformer_num=12,
embed_dim=25,
feed_forward_dim=100,
seq_len=20,
pos_num=20,
dropout_rate=0.05,
training=False, # The input layers and output layer will be returned if `training` is `False`
trainable=False, # Whether the model is trainable. The default value is the same with `training`
)
def _custom_layers(x, trainable=True):
return keras.layers.LSTM(
units=768,
trainable=trainable,
return_sequences=True,
name='LSTM',
)(x)
model = get_model(
token_num=200,
embed_dim=768,
custom_layers=_custom_layers,
)