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/test/srs.sh
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| a | b/test/srs.sh | ||
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| 1 | :<<! |
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| 2 | python umnsrs/umnsrs_eval.py /home/yz/pretraining_models/biobert_v1.1 |
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| 3 | python umnsrs/umnsrs_eval.py /home/yz/pretraining_models/bert-base-cased |
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| 4 | python umnsrs/umnsrs_eval.py /home/yz/pretraining_models/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext |
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| 5 | python umnsrs/umnsrs_eval.py /home/yz/pretraining_models/BiomedNLP-PubMedBERT-base-uncased-abstract |
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| 6 | python umnsrs/umnsrs_eval.py /home/yz/pretraining_models/kexinghuang_clinical |
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| 7 | python umnsrs/umnsrs_eval.py emilyalsentzer/Bio_ClinicalBERT |
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| 8 | python umnsrs/umnsrs_eval.py ../models/2020_eng |
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| 9 | python umnsrs/umnsrs_eval.py ../models/2020_all |
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| 10 | ! |
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| 11 | python umnsrs/umnsrs_eval.py ../embeddings/GoogleNews-vectors-negative300.bin |
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| 12 | python umnsrs/umnsrs_eval.py ../embeddings/wikipedia-pubmed-and-PMC-w2v.bin |
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| 13 | python umnsrs/umnsrs_eval.py ../embeddings/bio_nlp_vec/PubMed-shuffle-win-2.bin |
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| 14 | python umnsrs/umnsrs_eval.py ../embeddings/bio_nlp_vec/PubMed-shuffle-win-30.bin |
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| 15 | :<<! |
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| 16 | python mayosrs/srs_eval.py /home/yz/pretraining_models/biobert_v1.1 bert |
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| 17 | python mayosrs/srs_eval.py /home/yz/pretraining_models/bert-base-cased bert |
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| 18 | python mayosrs/srs_eval.py /home/yz/pretraining_models/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext bert |
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| 19 | python mayosrs/srs_eval.py /home/yz/pretraining_models/BiomedNLP-PubMedBERT-base-uncased-abstract |
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| 20 | python mayosrs/srs_eval.py /home/yz/pretraining_models/kexinghuang_clinical bert |
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| 21 | python mayosrs/srs_eval.py emilyalsentzer/Bio_ClinicalBERT bert |
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| 22 | python mayosrs/srs_eval.py ../models/2020_eng bert |
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| 23 | python mayosrs/srs_eval.py ../models/2020_all bert |
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| 24 | ! |
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| 25 | :<<! |
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| 26 | python mayosrs/srs_eval.py /home/yz/pretraining_models/cui2vec.pkl cui |
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| 27 | python mayosrs/srs_eval.py ../embeddings/GoogleNews-vectors-negative300.bin word |
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| 28 | python mayosrs/srs_eval.py ../embeddings/wikipedia-pubmed-and-PMC-w2v.bin word |
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| 29 | python mayosrs/srs_eval.py ../embeddings/bio_nlp_vec/PubMed-shuffle-win-2.bin word |
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| 30 | python mayosrs/srs_eval.py ../embeddings/bio_nlp_vec/PubMed-shuffle-win-30.bin word |
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| 31 | ! |
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| 32 | #python mayosrs/srs_eval.py ../embeddings/DeVine_etal_200.txt cui |
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| 33 | #python mayosrs/srs_eval.py ../embeddings/claims_codes_hs_300.txt cui |