--- a
+++ b/man/plot-methods.Rd
@@ -0,0 +1,95 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/eventPrediction_package.R, R/eventData.R, R/dataResults.R, R/eventModel.R, R/fromParameterPlot.R
+\docType{methods}
+\name{plot}
+\alias{plot}
+\alias{plot,AnalysisResults,missing-method}
+\alias{plot,EventData,missing-method}
+\alias{plot,EventModel,missing-method}
+\alias{plot,FromDataResults,missing-method}
+\title{The plot methods for EventPrediction package}
+\usage{
+plot(x, y, ...)
+
+\S4method{plot}{EventData,missing}(x, xlab = "log(t)",
+  ylab = "log(-log(S(t)))", main = "", ...)
+
+\S4method{plot}{FromDataResults,missing}(x,
+  title = getFromDataResultsSummaryText(x, round.method = round.method,
+  text.width = text.width, show.predictions = show.predictions),
+  show.title = FALSE, text.width = 80, show.obs = FALSE,
+  round.method = "None", show.predictions = TRUE, pred.to.present = FALSE,
+  xlim = c(0, -1), ylim = NULL, include.dropouts = TRUE,
+  legend.position = "bottomright", custom.dates = NULL)
+
+\S4method{plot}{EventModel,missing}(x, units = "Days",
+  xlab = paste("Time in study [", units, "]", sep = ""), ylab = "",
+  main = "", ylim = NULL, xlim = NULL, ...)
+
+\S4method{plot}{AnalysisResults,missing}(x, text = getFromParameterText(x,
+  options = options), options = DisplayOptions(text.width = 110),
+  show.title = TRUE, show.separate.arms = !isSingleArm(x@study),
+  ylim = NULL)
+}
+\arguments{
+\item{x}{Standard arguments to plot generic}
+
+\item{y}{Standard arguments to plot generic}
+
+\item{...}{Additional arguments for the plot function}
+
+\item{xlab}{X axis label.}
+
+\item{ylab}{Y axis label.}
+
+\item{main}{Plot title}
+
+\item{title}{The title text, by default it is \code{summary(x)}}
+
+\item{show.title}{Logical, if TRUE, will show title in plot.}
+
+\item{text.width}{Number of characters to wrap title text by.}
+
+\item{show.obs}{If TRUE, add a line and points displaying the observed events.}
+
+\item{round.method}{If the string "toMonths" then dates are rounded 
+to the nearest month. For the lower confidence interval value 
+the date 15 days earlier than the given value is rounded to the nearest 
+month and for the upper confidence intervalvalue the
+date 15 dats later than the given value is rounded to the nearest month}
+
+\item{show.predictions}{If TRUE show brown dashed lines at the user specified prediction
+times/number of events.}
+
+\item{pred.to.present}{If TRUE, move all predictions from past to present. Beware.}
+
+\item{xlim}{X axis limits. If \code{x} is \code{FromDataResults} object then
+c(2,10) will display from 2 to 10 months after the first 
+subject was recruited. Using c(0,-1) will show the entire graph}
+
+\item{ylim}{The y-axis range for the plot}
+
+\item{include.dropouts}{Include the cumulative dropouts on the graph (logical)}
+
+\item{legend.position}{The position of the graph legend}
+
+\item{custom.dates}{A vector of dates (in string or Date format) to be output on the x-axis
+if NULL then default dates will be used}
+
+\item{units}{Scale for the x-axis. "Days", "Months" or "Years"}
+
+\item{text}{Text to display be in title, e.g. output
+from the getSummaryText() function.}
+
+\item{options}{Use this to customize the output.}
+
+\item{show.separate.arms}{Logical, if TRUE (and if x is a two arm study) the expected event
+curves for the separate arms are displayed on the graph, otherwise do not show the curves.}
+}
+\description{
+For \code{x} an \code{EventData} object, this method will plot
+a cloglog survival curve of the data. If \code{x} is an \code{EventModel}
+object, this method will plot a KM curve of the data overlaid with the
+survival function from the model fit.
+}
+