[fd8900]: / processing / MACCROBAT / 23897372.ann

Download this file

301 lines (300 with data), 10.4 kB

T1	Age 2 13	60-year-old
T2	Personal_background 14 23	Caucasian
T3	Sex 24 29	woman
T4	History 35 65	no significant medical history
T5	Sign_symptom 76 96	exercise intolerance
E1	Sign_symptom:T5 
T6	Sign_symptom 98 105	fatigue
E2	Sign_symptom:T6 
T7	Sign_symptom 110 129	shortness of breath
E3	Sign_symptom:T7 
T8	Detailed_description 133 141	exertion
R1	MODIFY Arg1:T8 Arg2:E3	
T9	Duration 151 171	several months prior
E4	Duration:T9 
T10	Clinical_event 179 191	presentation
E5	Clinical_event:T10 
T11	Nonbiological_location 199 216	outpatient clinic
R2	MODIFY Arg1:T11 Arg2:E5	
T12	Sign_symptom 272 277	cough
E6	Sign_symptom:T12 
T13	Detailed_description 268 271	dry
R3	MODIFY Arg1:T13 Arg2:E6	
T14	Sign_symptom 279 288	orthopnea
E7	Sign_symptom:T14 
T15	Sign_symptom 311 319	dyspnoea
E8	Sign_symptom:T15 
T16	Detailed_description 301 310	nocturnal
T17	Detailed_description 290 300	paroxysmal
R4	MODIFY Arg1:T16 Arg2:E8	
R5	MODIFY Arg1:T17 Arg2:E8	
T18	Sign_symptom 333 341	weakness
E9	Sign_symptom:T18 
T19	Detailed_description 321 332	generalised
R6	MODIFY Arg1:T19 Arg2:E9	
T20	Sign_symptom 359 367	numbness
E10	Sign_symptom:T20 
T21	Biological_structure 375 380	hands
T22	Biological_structure 385 389	feet
R7	MODIFY Arg1:T21 Arg2:E10	
R8	MODIFY Arg1:T22 Arg2:E10	
T23	Detailed_description 346 358	intermittent
R9	MODIFY Arg1:T23 Arg2:E10	
T24	Activity 423 430	smoking
E11	Activity:T24 
A1	POLARITY E11 NEG
T25	Activity 432 439	alcohol
E12	Activity:T25 
A2	POLARITY E12 NEG
T26	Activity 443 456	illicit drugs
E13	Activity:T26 
A3	POLARITY E13 NEG
T27	Diagnostic_procedure 458 478	Physical examination
E14	Diagnostic_procedure:T27 
T28	Lab_value 483 495	unremarkable
R10	MODIFY Arg1:T28 Arg2:E14	
T29	Sign_symptom 523 533	distension
E15	Sign_symptom:T29 
T30	Outcome 2470 2479	succumbed
E16	Outcome:T30 
T31	Disease_disorder 2483 2503	sudden cardiac death
E17	Disease_disorder:T31 
T32	Biological_structure 508 522	jugular venous
R11	MODIFY Arg1:T32 Arg2:E15	
T33	Sign_symptom 543 559	S1 and S2 sounds
E18	Sign_symptom:T33 
T34	Sign_symptom 571 579	crackles
E19	Sign_symptom:T34 
T35	Detailed_description 561 570	bilateral
R12	MODIFY Arg1:T35 Arg2:E19	
T36	Diagnostic_procedure 583 600	lung auscultation
E20	Diagnostic_procedure:T36 
T37	Sign_symptom 623 629	oedema
E21	Sign_symptom:T37 
T38	Detailed_description 615 622	pitting
T39	Detailed_description 605 614	bilateral
R13	MODIFY Arg1:T39 Arg2:E21	
R14	MODIFY Arg1:T38 Arg2:E21	
T40	Diagnostic_procedure 637 642	X-ray
E22	Diagnostic_procedure:T40 
T41	Biological_structure 631 636	Chest
R15	MODIFY Arg1:T41 Arg2:E22	
T42	Sign_symptom 650 662	cardiomegaly
E23	Sign_symptom:T42 
T43	Sign_symptom 664 680	pulmonary oedema
E24	Sign_symptom:T43 
T44	Sign_symptom 707 724	pleural effusions
E25	Sign_symptom:T44 
T45	Severity 685 696	small-sized
T46	Detailed_description 697 706	bilateral
R16	MODIFY Arg1:T46 Arg2:E25	
R17	MODIFY Arg1:T45 Arg2:E25	
T47	Diagnostic_procedure 736 739	ECG
E26	Diagnostic_procedure:T47 
T48	Detailed_description 728 735	12-lead
R18	MODIFY Arg1:T48 Arg2:E26	
T49	Diagnostic_procedure 760 772	sinus rhythm
E27	Diagnostic_procedure:T49 
T50	Lab_value 753 759	normal
R19	MODIFY Arg1:T50 Arg2:E27	
T51	Sign_symptom 774 795	low-voltage complexes
E28	Sign_symptom:T51 
T52	Sign_symptom 808 828	right-axis deviation
E29	Sign_symptom:T52 
T53	Severity 800 807	extreme
R20	MODIFY Arg1:T53 Arg2:E29	
T54	Diagnostic_procedure 841 869	Transthoracic echocardiogram
E30	Diagnostic_procedure:T54 
T55	Diagnostic_procedure 871 874	TTE
E31	Diagnostic_procedure:T55 
R21	IDENTICAL Arg1:E31 Arg2:E30	
R22	CAUSE Arg1:E17 Arg2:E16	
T56	Sign_symptom 914 925	hypertrophy
E32	Sign_symptom:T56 
T57	Biological_structure 900 913	biventricular
T58	Detailed_description 889 899	asymmetric
R23	MODIFY Arg1:T57 Arg2:E32	
R24	MODIFY Arg1:T58 Arg2:E32	
T59	Diagnostic_procedure 941 958	ejection fraction
E33	Diagnostic_procedure:T59 
T60	Lab_value 931 940	preserved
R25	MODIFY Arg1:T60 Arg2:E33	
T61	Lab_value 962 965	60%
R26	MODIFY Arg1:T61 Arg2:E33	
T62	Diagnostic_procedure 994 1011	systolic pressure
E34	Diagnostic_procedure:T62 
T63	Lab_value 967 975	elevated
T64	Biological_structure 976 993	right-ventricular
R27	MODIFY Arg1:T64 Arg2:E34	
R28	MODIFY Arg1:T63 Arg2:E34	
T65	Lab_value 1015 1023	36 mm Hg
R29	MODIFY Arg1:T65 Arg2:E34	
T66	Diagnostic_procedure 1037 1055	myocardial texture
E35	Diagnostic_procedure:T66 
T67	Lab_value 1028 1036	abnormal
R30	MODIFY Arg1:T67 Arg2:E35	
T68	Texture 1071 1089	granular sparkling
R31	MODIFY Arg1:T68 Arg2:E35	
T69	Diagnostic_procedure 1112 1124	CT angiogram
E36	Diagnostic_procedure:T69 
T70	Biological_structure 1103 1111	Coronary
R32	MODIFY Arg1:T70 Arg2:E36	
T71	Lab_value 1138 1144	normal
R33	MODIFY Arg1:T71 Arg2:E36	
T72	Biological_structure 1145 1162	coronary arteries
R34	MODIFY Arg1:T72 Arg2:T71	
T73	Diagnostic_procedure 1186 1189	MRI
E37	Diagnostic_procedure:T73 
T74	Biological_structure 1178 1185	cardiac
R35	MODIFY Arg1:T74 Arg2:E37	
T75	Sign_symptom 1236 1255	delayed enhancement
E38	Sign_symptom:T75 
T76	Biological_structure 1221 1235	subendocardial
T77	Detailed_description 1213 1220	diffuse
T78	Detailed_description 1203 1208	early
R36	MODIFY Arg1:T76 Arg2:E38	
R37	MODIFY Arg1:T77 Arg2:E38	
R38	MODIFY Arg1:T78 Arg2:E38	
T79	Disease_disorder 1272 1303	infiltrative myocardial disease
E39	Disease_disorder:T79 
A4	POLARITY E39 UNCERTAIN
T80	Sign_symptom 1334 1345	hypertrophy
E40	Sign_symptom:T80 
T81	Detailed_description 1312 1319	diffuse
T82	Biological_structure 1320 1333	biventricular
R39	MODIFY Arg1:T82 Arg2:E40	
R40	MODIFY Arg1:T81 Arg2:E40	
T83	Diagnostic_procedure 1359 1376	ejection fraction
E41	Diagnostic_procedure:T83 
T84	Lab_value 1352 1358	normal
R41	MODIFY Arg1:T84 Arg2:E41	
T85	Therapeutic_procedure 1417 1438	heart catheterisation
E42	Therapeutic_procedure:T85 
T86	Detailed_description 1411 1416	right
R42	MODIFY Arg1:T86 Arg2:E42	
T87	Diagnostic_procedure 1459 1465	biopsy
E43	Diagnostic_procedure:T87 
T88	Biological_structure 1444 1458	endomyocardial
R43	MODIFY Arg1:T88 Arg2:E43	
T89	Disease_disorder 1485 1496	amyloidosis
E44	Disease_disorder:T89 
T90	Detailed_description 1477 1484	diffuse
R44	MODIFY Arg1:T90 Arg2:E44	
T91	Sign_symptom 1512 1534	proteinaceous material
E45	Sign_symptom:T91 
T92	Detailed_description 1502 1511	amorphous
R45	MODIFY Arg1:T92 Arg2:E45	
T93	Biological_structure 1542 1558	cardiac myocytes
R46	MODIFY Arg1:T93 Arg2:E45	
T94	Biological_structure 1570 1583	blood vessels
R47	MODIFY Arg1:T94 Arg2:E45	
T95	Diagnostic_procedure 1608 1623	Congo red stain
E46	Diagnostic_procedure:T95 
T96	Lab_value 1595 1603	positive
R48	MODIFY Arg1:E45 Arg2:E46	
R49	MODIFY Arg1:T96 Arg2:E46	
T97	Diagnostic_procedure 1647 1668	laboratory evaluation
E47	Diagnostic_procedure:T97 
T98	Diagnostic_procedure 1690 1709	free λ light chains
E48	Diagnostic_procedure:T98 
T99	Lab_value 1680 1688	elevated
R50	MODIFY Arg1:T99 Arg2:E48	
T100	Lab_value 1711 1720	86.3 mg/L
R51	MODIFY Arg1:T100 Arg2:E48	
T101	Diagnostic_procedure 1759 1778	Bence-Jones protein
E49	Diagnostic_procedure:T101 
T102	Lab_value 1750 1758	positive
R52	MODIFY Arg1:T102 Arg2:E49	
T103	Detailed_description 1800 1805	urine
R53	MODIFY Arg1:T103 Arg2:E49	
T104	Lab_value 1780 1791	0.37 g/24 h
R54	MODIFY Arg1:T104 Arg2:E49	
T105	Diagnostic_procedure 1819 1825	biopsy
E50	Diagnostic_procedure:T105 
T106	Biological_structure 1807 1818	Bone marrow
R55	MODIFY Arg1:T106 Arg2:E50	
T107	Disease_disorder 1971 1973	MM
E51	Disease_disorder:T107 
#1	AnnotatorNotes E51	multiple myeloma
T108	Disease_disorder 2029 2040	amyloidosis
E52	Disease_disorder:T108 
T109	Detailed_description 2026 2028	AL
#2	AnnotatorNotes T109	immunoglobulin light chain amyloidosis
R56	MODIFY Arg1:T109 Arg2:E52	
T110	Detailed_description 2017 2025	systemic
R57	MODIFY Arg1:T110 Arg2:E52	
T111	Disease_disorder 2075 2086	amyloidosis
E53	Disease_disorder:T111 
T112	Biological_structure 2067 2074	cardiac
T113	Detailed_description 2056 2065	stage III
T114	Severity 2046 2054	advanced
R58	MODIFY Arg1:T112 Arg2:E53	
R59	MODIFY Arg1:T113 Arg2:E53	
R60	MODIFY Arg1:T114 Arg2:E53	
T115	Disease_disorder 2105 2107	MM
E54	Disease_disorder:T115 
R61	CAUSE Arg1:E54 Arg2:E53	
T116	Diagnostic_procedure 1852 1864	infiltration
E55	Diagnostic_procedure:T116 
T117	Lab_value 1835 1851	greater than 10%
R62	MODIFY Arg1:T117 Arg2:E55	
T118	Detailed_description 1868 1899	CD19− CD56+ CD138+ plasma cells
R63	MODIFY Arg1:T118 Arg2:E55	
T119	Lab_value 1905 1913	reversal
T120	Diagnostic_procedure 1917 1933	marrow κ/λ ratio
E56	Diagnostic_procedure:T120 
R64	MODIFY Arg1:T119 Arg2:E56	
T121	Lab_value 1935 1939	<1:2
R65	MODIFY Arg1:T121 Arg2:E56	
T122	Disease_disorder 2136 2147	amyloidosis
E57	Disease_disorder:T122 
T123	Biological_structure 2128 2135	cardiac
T124	Severity 2119 2127	advanced
R66	MODIFY Arg1:T123 Arg2:E57	
R67	MODIFY Arg1:T124 Arg2:E57	
T125	Therapeutic_procedure 2193 2229	autologous stem-cell transplantation
E58	Therapeutic_procedure:T125 
A5	POLARITY E58 NEG
T126	Medication 2267 2279	chemotherapy
E59	Medication:T126 
T127	Detailed_description 2258 2266	systemic
R68	MODIFY Arg1:T127 Arg2:E59	
T128	Medication 2285 2294	melphalan
E60	Medication:T128 
T129	Medication 2299 2312	dexamethasone
E61	Medication:T129 
R69	SUB_PROCEDURE Arg1:E60 Arg2:E59	
R70	SUB_PROCEDURE Arg1:E61 Arg2:E59	
T130	Medication 2377 2386	diuretics
E62	Medication:T130 
T131	Medication 2388 2398	β-blockers
E63	Medication:T131 
T132	Medication 2403 2417	ACE inhibitors
E64	Medication:T132 
T133	Diagnostic_procedure 2432 2441	condition
E65	Diagnostic_procedure:T133 
T134	Lab_value 2455 2461	worsen
R71	MODIFY Arg1:T134 Arg2:E65	
*	OVERLAP E1 E2 E3 E4
R72	BEFORE Arg1:E4 Arg2:E5	
*	OVERLAP E5 E6 E7 E8 E9 E10
R73	AFTER Arg1:E10 Arg2:E11	
*	OVERLAP E11 E12 E13
T135	History 391 456	Social history was negative for smoking, alcohol or illicit drugs
R74	BEFORE Arg1:E13 Arg2:E14	
*	OVERLAP E14 E15 E18 E19 E20 E21 E22 E23 E24 E25 E26 E27 E28 E29 E30 E32 E33 E34 E35 E36
R75	BEFORE Arg1:E36 Arg2:E37	
*	OVERLAP E37 E38 E39 E40 E41
R76	BEFORE Arg1:E41 Arg2:E42	
*	OVERLAP E42 E43 E44 E45 E46
R77	BEFORE Arg1:E46 Arg2:E47	
R78	SUB_PROCEDURE Arg1:E48 Arg2:E47	
R79	SUB_PROCEDURE Arg1:E49 Arg2:E47	
*	OVERLAP E47 E50 E55 E56 E51
R80	BEFORE Arg1:E51 Arg2:E52	
*	OVERLAP E52 E53 E54 E57 E58
R81	BEFORE Arg1:E58 Arg2:E59	
R82	BEFORE Arg1:E59 Arg2:E62	
*	OVERLAP E62 E63 E64
R83	BEFORE Arg1:E64 Arg2:E65	
R84	BEFORE Arg1:E65 Arg2:E16