--- a +++ b/processing/MACCROBAT/28321073.ann @@ -0,0 +1,340 @@ +T1 Age 2 13 65-year-old +T2 Sex 14 17 man +T3 Activity 44 61 cigarette smoking +E1 Activity:T3 +T4 History 25 61 45-year history of cigarette smoking +T5 Clinical_event 62 69 visited +E2 Clinical_event:T5 +T6 Nonbiological_location 74 82 hospital +R1 MODIFY Arg1:T6 Arg2:E2 +T7 Sign_symptom 122 128 shadow +E3 Sign_symptom:T7 +T8 Diagnostic_procedure 132 137 X-ray +E4 Diagnostic_procedure:T8 +T9 Detailed_description 107 115 abnormal +T10 Biological_structure 116 121 chest +R2 MODIFY Arg1:T10 Arg2:E3 +R3 MODIFY Arg1:T9 Arg2:E3 +T11 Duration 25 32 45-year +E5 Duration:T11 +R4 MODIFY Arg1:E5 Arg2:E1 +T12 History 142 185 did not have any remarkable medical history +T13 Medication 214 228 anticoagulants +E6 Medication:T13 +A1 POLARITY E6 NEG +T14 Medication 232 251 antiplatelet agents +E7 Medication:T14 +A2 POLARITY E7 NEG +T15 Diagnostic_procedure 255 274 computed tomography +E8 Diagnostic_procedure:T15 +T16 Diagnostic_procedure 276 278 CT +E9 Diagnostic_procedure:T16 +R5 IDENTICAL Arg1:E9 Arg2:E8 +T17 Sign_symptom 301 305 mass +E10 Sign_symptom:T17 +T18 Detailed_description 296 300 huge +R6 MODIFY Arg1:T18 Arg2:E10 +T19 Biological_structure 313 328 left upper lobe +R7 MODIFY Arg1:T19 Arg2:E10 +T20 Distance 344 351 11.0 cm +R8 MODIFY Arg1:T20 Arg2:E10 +T21 Biological_structure 399 409 left hilum +T22 Biological_structure 414 425 mediastinum +R9 MODIFY Arg1:T21 Arg2:E10 +R10 MODIFY Arg1:T22 Arg2:E10 +T23 Sign_symptom 456 466 metastasis +E11 Sign_symptom:T23 +T24 Biological_structure 441 455 intrapulmonary +R11 MODIFY Arg1:T24 Arg2:E11 +T25 Biological_structure 482 497 left lower lobe +R12 MODIFY Arg1:T25 Arg2:E11 +T26 Disease_disorder 499 515 pleural effusion +E12 Disease_disorder:T26 +T27 Detailed_description 523 532 left side +R13 MODIFY Arg1:T27 Arg2:E12 +T28 Sign_symptom 553 559 tumors +E13 Sign_symptom:T28 +T29 Biological_structure 547 552 liver +R14 MODIFY Arg1:T29 Arg2:E13 +T30 Detailed_description 538 546 multiple +R15 MODIFY Arg1:T30 Arg2:E13 +T31 Distance 573 586 0.5 to 4.7 cm +R16 MODIFY Arg1:T31 Arg2:E13 +T32 Coreference 635 645 metastases +E14 Coreference:T32 +R17 IDENTICAL Arg1:E14 Arg2:E13 +T33 Biological_structure 629 634 liver +R18 MODIFY Arg1:T33 Arg2:E14 +T34 Detailed_description 651 672 located subcapsularly +R19 MODIFY Arg1:T34 Arg2:E14 +T35 Detailed_description 617 621 some +R20 MODIFY Arg1:T35 Arg2:E14 +T36 Sign_symptom 712 721 distorted +E15 Sign_symptom:T36 +T37 Biological_structure 682 695 liver surface +R21 MODIFY Arg1:T37 Arg2:E15 +T38 Detailed_description 700 711 irregularly +R22 MODIFY Arg1:T38 Arg2:E15 +T39 Diagnostic_procedure 727 746 laboratory findings +E16 Diagnostic_procedure:T39 +T40 Diagnostic_procedure 764 786 white blood cell count +E17 Diagnostic_procedure:T40 +T41 Diagnostic_procedure 799 809 hemoglobin +E18 Diagnostic_procedure:T41 +T42 Diagnostic_procedure 821 835 platelet count +E19 Diagnostic_procedure:T42 +T43 Diagnostic_procedure 849 871 aspartate transaminase +E20 Diagnostic_procedure:T43 +T44 Diagnostic_procedure 881 901 alanine transaminase +E21 Diagnostic_procedure:T44 +T45 Diagnostic_procedure 915 936 lactate dehydrogenase +E22 Diagnostic_procedure:T45 +T46 Diagnostic_procedure 938 941 LDH +E23 Diagnostic_procedure:T46 +R23 IDENTICAL Arg1:E23 Arg2:E22 +T47 Lab_value 787 797 11,900/mm3 +T48 Lab_value 810 819 14.8 g/dL +T49 Lab_value 836 847 214,000/mm3 +T50 Lab_value 872 879 31 IU/L +T51 Lab_value 902 909 19 IU/L +T52 Lab_value 943 951 749 IU/L +R24 MODIFY Arg1:T47 Arg2:E17 +R25 MODIFY Arg1:T48 Arg2:E18 +R26 MODIFY Arg1:T49 Arg2:E19 +R27 MODIFY Arg1:T50 Arg2:E20 +R28 MODIFY Arg1:T51 Arg2:E21 +R29 MODIFY Arg1:T52 Arg2:E22 +R30 SUB_PROCEDURE Arg1:E17 Arg2:E16 +R31 SUB_PROCEDURE Arg1:E18 Arg2:E16 +R32 SUB_PROCEDURE Arg1:E19 Arg2:E16 +R33 SUB_PROCEDURE Arg1:E20 Arg2:E16 +R34 SUB_PROCEDURE Arg1:E21 Arg2:E16 +R35 SUB_PROCEDURE Arg1:E22 Arg2:E16 +T53 Sign_symptom 956 981 coagulation abnormalities +E24 Sign_symptom:T53 +A3 POLARITY E24 NEG +T54 Diagnostic_procedure 1007 1031 histological examination +E25 Diagnostic_procedure:T54 +T55 Diagnostic_procedure 1064 1076 bronchoscopy +E26 Diagnostic_procedure:T55 +T56 Disease_disorder 1104 1124 small cell carcinoma +E27 Disease_disorder:T56 +T57 Sign_symptom 1037 1042 tumor +E28 Sign_symptom:T57 +R36 MODIFY Arg1:E28 Arg2:E25 +T58 Medication 1246 1258 chemotherapy +E29 Medication:T58 +T59 Detailed_description 1236 1245 antitumor +R37 MODIFY Arg1:T59 Arg2:E29 +T60 Medication 1273 1282 cisplatin +E30 Medication:T60 +T61 Dosage 1284 1310 60 mg/m2 body surface area +T62 Date 1314 1319 Day 1 +E31 Date:T62 +T63 Medication 1325 1334 etoposide +E32 Medication:T63 +T64 Dosage 1336 1363 100 mg/m2 body surface area +T65 Date 1367 1375 Days 1-3 +E33 Date:T65 +R38 MODIFY Arg1:T64 Arg2:E32 +R39 MODIFY Arg1:T61 Arg2:E30 +R40 SUB_PROCEDURE Arg1:E30 Arg2:E29 +R41 SUB_PROCEDURE Arg1:E32 Arg2:E29 +T66 Date 1381 1400 a day after 2 weeks +E34 Date:T66 +T67 Diagnostic_procedure 1418 1420 CT +E35 Diagnostic_procedure:T67 +T68 Medication 1448 1460 chemotherapy +E36 Medication:T68 +T69 Date 1473 1478 Day 3 +E37 Date:T69 +T70 Sign_symptom 1537 1547 discomfort +E38 Sign_symptom:T70 +T71 Biological_structure 1527 1536 abdominal +R42 MODIFY Arg1:T71 Arg2:E38 +T72 Diagnostic_procedure 1557 1568 vital signs +E39 Diagnostic_procedure:T72 +T73 Sign_symptom 1576 1587 tachycardia +E40 Sign_symptom:T73 +T74 Lab_value 1589 1609 120 beats per minute +R43 MODIFY Arg1:T74 Arg2:E39 +#1 AnnotatorNotes T74 implicit heart rate measurement +T75 Sign_symptom 1615 1626 hypotension +E41 Sign_symptom:T75 +T76 Lab_value 1628 1638 85/55 mmHg +R44 MODIFY Arg1:T76 Arg2:E39 +#2 AnnotatorNotes T76 implicit blood pressure measurement +T77 Diagnostic_procedure 1643 1668 hematological examination +E42 Diagnostic_procedure:T77 +T78 Sign_symptom 1683 1689 anemia +E43 Sign_symptom:T78 +T79 Severity 1676 1682 severe +R45 MODIFY Arg1:T79 Arg2:E43 +T80 Diagnostic_procedure 1691 1701 hemoglobin +E44 Diagnostic_procedure:T80 +R46 SUB_PROCEDURE Arg1:E44 Arg2:E42 +T81 Lab_value 1702 1710 6.7 g/dL +R47 MODIFY Arg1:T81 Arg2:E44 +T82 Lab_value 1734 1741 dropped +T83 Duration 1757 1769 over 10 days +E45 Duration:T83 +T84 Lab_value 1747 1756 14.8 g/dL +R48 MODIFY Arg1:T82 Arg2:E44 +R49 MODIFY Arg1:T84 Arg2:E44 +T85 Diagnostic_procedure 1834 1843 endoscopy +E46 Diagnostic_procedure:T85 +T86 Biological_structure 1817 1833 gastrointestinal +R50 MODIFY Arg1:T86 Arg2:E46 +T87 Diagnostic_procedure 1864 1866 CT +E47 Diagnostic_procedure:T87 +T88 Sign_symptom 1891 1902 enlargement +E48 Sign_symptom:T88 +T89 Detailed_description 1885 1890 rapid +R51 MODIFY Arg1:T89 Arg2:E48 +T90 Sign_symptom 1914 1919 tumor +E49 Sign_symptom:T90 +T91 Biological_structure 1908 1913 liver +R52 MODIFY Arg1:T91 Arg2:E49 +R53 MODIFY Arg1:E49 Arg2:E48 +T92 Biological_structure 1927 1936 left lobe +R54 MODIFY Arg1:T92 Arg2:E49 +T93 Sign_symptom 1962 1980 high-density areas +E50 Sign_symptom:T93 +T94 Detailed_description 1954 1961 partial +R55 MODIFY Arg1:T94 Arg2:E50 +T95 Diagnostic_procedure 1988 1998 plain scan +E51 Diagnostic_procedure:T95 +R56 SUB_PROCEDURE Arg1:E51 Arg2:E47 +T96 Sign_symptom 2028 2035 ascites +E52 Sign_symptom:T96 +T97 Detailed_description 2044 2069 higher density than usual +R57 MODIFY Arg1:T97 Arg2:E52 +T98 Sign_symptom 2103 2113 metastasis +E53 Sign_symptom:T98 +A4 POLARITY E53 UNCERTAIN +T99 Biological_structure 2097 2102 liver +T100 Detailed_description 2088 2096 ruptured +R58 MODIFY Arg1:T100 Arg2:E53 +R59 MODIFY Arg1:T99 Arg2:E53 +T101 Sign_symptom 2141 2148 ascites +E54 Sign_symptom:T101 +T102 Detailed_description 2129 2140 hemorrhagic +R60 MODIFY Arg1:T102 Arg2:E54 +R61 CAUSE Arg1:E53 Arg2:E54 +T103 Diagnostic_procedure 2189 2191 CT +E55 Diagnostic_procedure:T103 +T104 Detailed_description 2171 2188 contrast-enhanced +R62 MODIFY Arg1:T104 Arg2:E55 +T105 Sign_symptom 2215 2228 extravasation +E56 Sign_symptom:T105 +A5 POLARITY E56 NEG +T106 Diagnostic_procedure 2243 2254 angiography +E57 Diagnostic_procedure:T106 +T107 Biological_structure 2263 2294 left and right hepatic arteries +R63 MODIFY Arg1:T107 Arg2:E57 +T108 Sign_symptom 2372 2385 extravasation +E58 Sign_symptom:T108 +A6 POLARITY E58 NEG +T109 Sign_symptom 2325 2338 tumor vessels +E59 Sign_symptom:T109 +T110 Detailed_description 2317 2324 obscure +R64 MODIFY Arg1:T110 Arg2:E59 +T111 Biological_structure 2346 2363 left hepatic lobe +R65 MODIFY Arg1:T111 Arg2:E59 +T112 Therapeutic_procedure 2646 2681 transcatheter arterial embolization +E60 Therapeutic_procedure:T112 +T113 Therapeutic_procedure 2683 2686 TAE +E61 Therapeutic_procedure:T113 +R66 IDENTICAL Arg1:E61 Arg2:E60 +T114 Biological_structure 2695 2719 left main hepatic artery +R67 MODIFY Arg1:T114 Arg2:E61 +T115 Therapeutic_procedure 2726 2743 gelform particles +E62 Therapeutic_procedure:T115 +R68 SUB_PROCEDURE Arg1:E62 Arg2:E60 +T116 Diagnostic_procedure 2793 2804 angiography +E63 Diagnostic_procedure:T116 +T117 Diagnostic_procedure 2823 2833 blood flow +E64 Diagnostic_procedure:T117 +T118 Lab_value 2816 2822 slowed +R69 MODIFY Arg1:T118 Arg2:E64 +T119 Biological_structure 2841 2860 left hepatic artery +R70 MODIFY Arg1:T119 Arg2:E64 +T120 Therapeutic_procedure 2962 2982 supportive therapies +E65 Therapeutic_procedure:T120 +T121 Medication 2994 2997 RBC +E66 Medication:T121 +T122 Administration 2998 3010 transfusions +R71 MODIFY Arg1:T122 Arg2:E66 +T123 Dosage 3014 3017 6 U +R72 MODIFY Arg1:T123 Arg2:E66 +#3 AnnotatorNotes E66 red blood cells +T124 Diagnostic_procedure 3032 3047 clinical course +E67 Diagnostic_procedure:T124 +T125 Lab_value 3063 3073 stabilized +R73 MODIFY Arg1:T125 Arg2:E67 +T126 Diagnostic_procedure 3079 3093 blood pressure +E68 Diagnostic_procedure:T126 +T127 Lab_value 3110 3121 120/70 mmHg +R74 MODIFY Arg1:T127 Arg2:E68 +T128 Sign_symptom 3123 3134 tachycardia +E69 Sign_symptom:T128 +A7 POLARITY E69 NEG +T129 Sign_symptom 3156 3162 anemia +E70 Sign_symptom:T129 +A8 TREND E70 DEC +T130 Sign_symptom 3228 3239 dysfunction +E71 Sign_symptom:T130 +A9 POLARITY E71 NEG +T131 Biological_structure 3222 3227 Liver +R75 MODIFY Arg1:T131 Arg2:E71 +T132 Date 3256 3269 A month after +E72 Date:T132 +T133 Diagnostic_procedure 3314 3320 health +E73 Diagnostic_procedure:T133 +T134 Lab_value 3298 3313 relatively good +R76 MODIFY Arg1:T134 Arg2:E73 +T135 Medication 3350 3362 chemotherapy +E74 Medication:T135 +T136 Detailed_description 3340 3349 antitumor +R77 MODIFY Arg1:T136 Arg2:E74 +T137 Dosage 3408 3419 six courses +R78 MODIFY Arg1:T137 Arg2:E74 +T138 Diagnostic_procedure 3436 3444 response +E75 Diagnostic_procedure:T138 +T139 Lab_value 3423 3427 good +T140 Lab_value 3428 3435 partial +R79 MODIFY Arg1:T140 Arg2:E75 +R80 MODIFY Arg1:T139 Arg2:E75 +T141 Medication 3462 3474 chemotherapy +E76 Medication:T141 +T142 Sign_symptom 3503 3510 lesions +E77 Sign_symptom:T142 +T143 Biological_structure 3488 3492 lung +T144 Biological_structure 3497 3502 liver +R81 MODIFY Arg1:T144 Arg2:E77 +R82 MODIFY Arg1:T143 Arg2:E77 +R83 BEFORE Arg1:E1 Arg2:E2 +R84 AFTER Arg1:E2 Arg2:E3 +* OVERLAP E3 E4 +R85 AFTER Arg1:E4 Arg2:E6 +* OVERLAP E6 E7 +R86 BEFORE Arg1:E7 Arg2:E8 +* OVERLAP E8 E10 E11 E12 E13 E14 E15 E16 E24 E25 E26 E27 +R87 BEFORE Arg1:E27 Arg2:E29 +R88 BEFORE Arg1:E29 Arg2:E34 +R89 MODIFY Arg1:E31 Arg2:E30 +R90 MODIFY Arg1:E33 Arg2:E32 +R91 AFTER Arg1:E34 Arg2:E35 +R92 BEFORE Arg1:E35 Arg2:E36 +R93 BEFORE Arg1:E36 Arg2:E37 +* OVERLAP E37 E38 E39 E42 E46 E47 E48 E49 E50 E52 E53 E54 E55 E56 +R94 BEFORE Arg1:E56 Arg2:E57 +* OVERLAP E57 E59 E58 +R95 BEFORE Arg1:E58 Arg2:E60 +R96 BEFORE Arg1:E60 Arg2:E63 +* OVERLAP E63 E64 +R97 BEFORE Arg1:E64 Arg2:E65 +* OVERLAP E65 E66 E67 E68 E69 E70 E71 +R98 BEFORE Arg1:E71 Arg2:E72 +* OVERLAP E72 E73 E74 E75 E76 E77 +R99 MODIFY Arg1:E77 Arg2:E75