[fd8900]: / processing / MACCROBAT / 28250406.ann

Download this file

296 lines (295 with data), 10.1 kB

T1	Age 2 13	68-year-old
T2	Sex 14 17	man
T3	Clinical_event 18 26	referred
E1	Clinical_event:T3 
T4	Nonbiological_location 34 62	Internal Medicine Department
T5	Nonbiological_location 66 79	Razi Hospital
R1	MODIFY Arg1:T4 Arg2:E1	
R2	MODIFY Arg1:T5 Arg2:T4	
T6	Nonbiological_location 83 88	Rasht
R3	MODIFY Arg1:T6 Arg2:T5	
T7	Nonbiological_location 90 117	a city in the north of Iran
R4	MODIFY Arg1:T7 Arg2:T6	
T8	Sign_symptom 145 155	discomfort
E2	Sign_symptom:T8 
T9	Biological_structure 126 144	hypogastric region
R5	MODIFY Arg1:T9 Arg2:E2	
T10	Biological_structure 175 195	right lower quadrant
R6	MODIFY Arg1:T10 Arg2:E2	
T11	Duration 200 209	one month
E3	Duration:T11 
T12	Coreference 215 219	pain
E4	Coreference:T12 
R7	IDENTICAL Arg1:E4 Arg2:E2	
T13	Detailed_description 226 238	colicky form
R8	MODIFY Arg1:T13 Arg2:E4	
T14	Frequency 249 272	a few episodes each day
R9	MODIFY Arg1:T14 Arg2:E4	
T15	Detailed_description 274 310	each episode lasting for 4–5 minutes
R10	MODIFY Arg1:T15 Arg2:E4	
T16	Coreference 316 320	pain
E5	Coreference:T16 
R11	IDENTICAL Arg1:E5 Arg2:E4	
T17	Nonbiological_location 337 341	back
R12	MODIFY Arg1:T17 Arg2:E5	
T18	Activity 364 383	resting to one side
E6	Activity:T18 
T19	Sign_symptom 350 360	alleviated
E7	Sign_symptom:T19 
R13	CAUSE Arg1:E6 Arg2:E7	
T20	History 385 440	No association between the pain, defecation, and eating
T21	Sign_symptom 504 515	weight loss
E8	Sign_symptom:T21 
T22	Sign_symptom 552 560	anorexia
E9	Sign_symptom:T22 
T23	Duration 525 539	last one month
E10	Duration:T23 
T24	Lab_value 497 503	2–3 kg
R14	MODIFY Arg1:T24 Arg2:E8	
T25	Sign_symptom 586 592	nausea
E11	Sign_symptom:T25 
A1	POLARITY E11 NEG
T26	Sign_symptom 594 602	vomiting
E12	Sign_symptom:T26 
A2	POLARITY E12 NEG
T27	Sign_symptom 604 609	fever
E13	Sign_symptom:T27 
A3	POLARITY E13 NEG
T28	Sign_symptom 614 628	shaking chills
E14	Sign_symptom:T28 
A4	POLARITY E14 NEG
T29	Clinical_event 661 669	admitted
E15	Clinical_event:T29 
T30	Nonbiological_location 673 687	another center
R15	MODIFY Arg1:T30 Arg2:E15	
T31	Duration 692 698	a week
E16	Duration:T31 
T32	Clinical_event 709 717	referred
E17	Clinical_event:T32 
T33	Nonbiological_location 721 733	our hospital
R16	MODIFY Arg1:T33 Arg2:E17	
T34	Therapeutic_procedure 786 793	surgery
E18	Therapeutic_procedure:T34 
T35	Therapeutic_procedure 798 811	prostatectomy
E19	Therapeutic_procedure:T35 
R17	SUB_PROCEDURE Arg1:E19 Arg2:E18	
T36	Date 812 830	seven years before
E20	Date:T36 
T37	Clinical_event 835 847	presentation
E21	Clinical_event:T37 
T38	Nonbiological_location 851 861	our center
R18	MODIFY Arg1:T38 Arg2:E21	
T39	History 786 811	surgery for prostatectomy
T40	History 889 898	endoscopy
T41	Diagnostic_procedure 889 898	endoscopy
E22	Diagnostic_procedure:T41 
T42	Date 899 917	five years earlier
E23	Date:T42 
T43	Disease_disorder 925 934	dyspepsia
E24	Disease_disorder:T43 
T44	Diagnostic_procedure 958 977	Helicobacter pylori
E25	Diagnostic_procedure:T44 
T45	Lab_value 978 986	positive
R19	MODIFY Arg1:T45 Arg2:E25	
T46	Sign_symptom 1014 1024	eradicated
E26	Sign_symptom:T46 
T47	Therapeutic_procedure 1033 1049	treatment course
E27	Therapeutic_procedure:T47 
T48	History 1051 1111	No history of HIV, diabetes, smoking, or alcohol consumption
T49	Diagnostic_procedure 1130 1141	vital signs
E28	Diagnostic_procedure:T49 
T50	Lab_value 1147 1153	normal
R20	MODIFY Arg1:T50 Arg2:E28	
T51	Diagnostic_procedure 1183 1203	physical examination
E29	Diagnostic_procedure:T51 
T54	Sign_symptom 1240 1250	distention
E31	Sign_symptom:T54 
A5	POLARITY E31 NEG
T55	Diagnostic_procedure 1256 1268	bowel sounds
E32	Diagnostic_procedure:T55 
T56	Lab_value 1274 1285	normoactive
R23	MODIFY Arg1:T56 Arg2:E32	
T57	Sign_symptom 1296 1306	tenderness
E33	Sign_symptom:T57 
T58	Biological_structure 1314 1349	right lower quadrant of the abdomen
R24	MODIFY Arg1:T58 Arg2:E33	
T59	Diagnostic_procedure 1358 1371	rebound state
E34	Diagnostic_procedure:T59 
T60	Lab_value 1355 1357	no
R25	MODIFY Arg1:T60 Arg2:E34	
R26	MODIFY Arg1:T58 Arg2:E34	
T61	Diagnostic_procedure 1387 1412	peripheral blood analysis
E35	Diagnostic_procedure:T61 
T62	Diagnostic_procedure 1434 1451	Stool examination
E36	Diagnostic_procedure:T62 
T63	Diagnostic_procedure 1453 1467	urine analysis
E37	Diagnostic_procedure:T63 
T64	Diagnostic_procedure 1473 1499	evaluation of electrolytes
E38	Diagnostic_procedure:T64 
T65	Lab_value 1509 1515	normal
R27	MODIFY Arg1:T65 Arg2:E38	
R28	MODIFY Arg1:T65 Arg2:E37	
R29	MODIFY Arg1:T65 Arg2:E36	
T66	Diagnostic_procedure 1530 1532	CT
E39	Diagnostic_procedure:T66 
T67	Biological_structure 1520 1529	abdominal
R30	MODIFY Arg1:T67 Arg2:E39	
T68	Sign_symptom 1587 1591	mass
E40	Sign_symptom:T68 
T69	Detailed_description 1578 1586	solitary
T70	Detailed_description 1567 1577	homogenous
T71	Detailed_description 1547 1562	well-demarcated
R31	MODIFY Arg1:T69 Arg2:E40	
R32	MODIFY Arg1:T70 Arg2:E40	
R33	MODIFY Arg1:T70 Arg2:E40	
T72	Biological_structure 1599 1604	cecum
R34	MODIFY Arg1:T72 Arg2:E40	
T73	Sign_symptom 1613 1623	distention
E41	Sign_symptom:T73 
A6	POLARITY E41 NEG
T74	Biological_structure 1631 1636	ileum
R35	MODIFY Arg1:T74 Arg2:E41	
T52	Sign_symptom 1221 1225	soft
E30	Sign_symptom:T52 
T53	Biological_structure 1209 1216	abdomen
R21	MODIFY Arg1:T53 Arg2:E30	
T75	Sign_symptom 1657 1666	thickened
E42	Sign_symptom:T75 
T76	Biological_structure 1642 1652	ileum wall
R22	MODIFY Arg1:T76 Arg2:E42	
T77	Diagnostic_procedure 1681 1692	colonoscopy
E43	Diagnostic_procedure:T77 
T78	Sign_symptom 1720 1726	lesion
E44	Sign_symptom:T78 
T79	Lab_value 1704 1709	large
T80	Detailed_description 1710 1719	mass like
R36	MODIFY Arg1:T80 Arg2:E44	
R37	MODIFY Arg1:T79 Arg2:E44	
T81	Biological_structure 1734 1739	cecum
R38	MODIFY Arg1:T81 Arg2:E44	
T82	Diagnostic_procedure 1775 1781	biopsy
E45	Diagnostic_procedure:T82 
T83	Biological_structure 1801 1806	cecum
R39	MODIFY Arg1:T83 Arg2:E45	
T84	Biological_structure 1812 1826	lamina propria
T85	Sign_symptom 1831 1842	infiltrated
E46	Sign_symptom:T85 
T87	Biological_structure 1880 1891	eosinophils
T86	Biological_structure 1858 1863	PMNCs
#1	AnnotatorNotes T86	polymorphonuclear cells
R40	MODIFY Arg1:T86 Arg2:E46	
R41	MODIFY Arg1:T87 Arg2:E46	
T88	Diagnostic_procedure 1904 1934	Immunohistochemical evaluation
E47	Diagnostic_procedure:T88 
T89	Diagnostic_procedure 1952 1960	vimentin
E48	Diagnostic_procedure:T89 
T90	Diagnostic_procedure 1965 1969	CD68
E49	Diagnostic_procedure:T90 
T91	Lab_value 1939 1947	positive
R42	MODIFY Arg1:T91 Arg2:E48	
R43	MODIFY Arg1:T91 Arg2:E49	
R44	SUB_PROCEDURE Arg1:E48 Arg2:E47	
R45	SUB_PROCEDURE Arg1:E49 Arg2:E47	
T92	Diagnostic_procedure 1971 1976	C-Kit
E50	Diagnostic_procedure:T92 
T93	Diagnostic_procedure 1978 1983	CD117
E51	Diagnostic_procedure:T93 
R46	IDENTICAL Arg1:E51 Arg2:E50	
T94	Lab_value 1989 1997	negative
R47	MODIFY Arg1:T94 Arg2:E50	
T95	Diagnostic_procedure 2004 2008	CD34
E52	Diagnostic_procedure:T95 
T96	Diagnostic_procedure 2010 2029	smooth muscle actin
E53	Diagnostic_procedure:T96 
T97	Diagnostic_procedure 2031 2034	SMA
E54	Diagnostic_procedure:T97 
T98	Diagnostic_procedure 2041 2044	ALK
E55	Diagnostic_procedure:T98 
R48	IDENTICAL Arg1:E54 Arg2:E53	
T99	Lab_value 2050 2066	focally positive
R49	MODIFY Arg1:T99 Arg2:E55	
R50	MODIFY Arg1:T99 Arg2:E53	
R51	MODIFY Arg1:T99 Arg2:E52	
T100	Diagnostic_procedure 2093 2102	cyclin D1
E56	Diagnostic_procedure:T100 
T101	Diagnostic_procedure 2104 2110	desmin
E57	Diagnostic_procedure:T101 
T102	Diagnostic_procedure 2115 2129	pancytokeratin
E58	Diagnostic_procedure:T102 
T103	Lab_value 2079 2089	no reports
R52	MODIFY Arg1:T103 Arg2:E56	
R53	MODIFY Arg1:T103 Arg2:E57	
R54	MODIFY Arg1:T103 Arg2:E58	
T104	Disease_disorder 2245 2260	malignant tumor
E59	Disease_disorder:T104 
T105	Disease_disorder 2297 2300	IMT
E60	Disease_disorder:T105 
#2	AnnotatorNotes E60	Inflammatory Myofibroblastic Tumor
T106	Therapeutic_procedure 2331 2338	surgery
E61	Therapeutic_procedure:T106 
T107	Clinical_event 2318 2326	referred
E62	Clinical_event:T107 
T108	Coreference 2371 2378	surgery
E63	Coreference:T108 
R55	IDENTICAL Arg1:E63 Arg2:E61	
T109	Volume 2394 2399	40 mL
T110	Sign_symptom 2400 2407	ascites
E64	Sign_symptom:T110 
T111	Biological_structure 2426 2433	abdomen
R56	MODIFY Arg1:T111 Arg2:E64	
R57	MODIFY Arg1:T109 Arg2:E64	
T112	Sign_symptom 2437 2441	mass
E65	Sign_symptom:T112 
T113	Biological_structure 2458 2463	cecum
R58	MODIFY Arg1:T113 Arg2:E65	
T114	Sign_symptom 2479 2494	intussusception
E66	Sign_symptom:T114 
T115	Biological_structure 2469 2478	ileocolic
R59	MODIFY Arg1:T115 Arg2:E66	
T116	Therapeutic_procedure 2536 2549	hemicolectomy
E67	Therapeutic_procedure:T116 
T117	Detailed_description 2530 2535	right
R60	MODIFY Arg1:T117 Arg2:E67	
T118	Therapeutic_procedure 2569 2593	anastomosis of ileocolic
E68	Therapeutic_procedure:T118 
T119	Detailed_description 2558 2568	end-to-end
R61	MODIFY Arg1:T119 Arg2:E68	
R62	SUB_PROCEDURE Arg1:E68 Arg2:E67	
T120	Sign_symptom 2598 2605	enlarge
E69	Sign_symptom:T120 
T121	Biological_structure 2606 2617	lymph nodes
R63	MODIFY Arg1:T121 Arg2:E69	
T122	Clinical_event 2649 2659	discharged
E70	Clinical_event:T122 
T123	Date 2660 2676	seven days after
E71	Date:T123 
T124	Sign_symptom 2696 2709	complications
E72	Sign_symptom:T124 
A7	POLARITY E72 NEG
T125	Clinical_event 2717 2726	follow-up
E73	Clinical_event:T125 
R64	AFTER Arg1:E1 Arg2:E2	
*	OVERLAP E2 E4 E5 E7
R65	AFTER Arg1:E7 Arg2:E8	
*	OVERLAP E8 E10
R66	BEFORE Arg1:E10 Arg2:E9	
R67	BEFORE Arg1:E9 Arg2:E11	
*	OVERLAP E11 E12 E13 E14
R68	BEFORE Arg1:E14 Arg2:E15	
*	OVERLAP E15 E16 E17
R69	AFTER Arg1:E17 Arg2:E18	
*	OVERLAP E18 E20
R70	BEFORE Arg1:E20 Arg2:E21	
R71	AFTER Arg1:E21 Arg2:E22	
*	OVERLAP E22 E23 E24 E25
R72	BEFORE Arg1:E25 Arg2:E26	
R73	AFTER Arg1:E26 Arg2:E27	
R74	BEFORE Arg1:E27 Arg2:E28	
*	OVERLAP E28 E29 E30 E31 E32 E33 E34 E35 E36 E37 E38 E39 E40 E41 E42 E43 E44 E45 E46 E47 E50 E52 E53 E55 E56 E57 E58 E59 E60
R75	MODIFY Arg1:T84 Arg2:E46	
R76	BEFORE Arg1:E60 Arg2:E62	
*	OVERLAP E62 E61 E64 E65 E66 E67 E69
R77	BEFORE Arg1:E69 Arg2:E70	
*	OVERLAP E70 E71
R78	BEFORE Arg1:E71 Arg2:E72	
*	OVERLAP E72 E73