--- a +++ b/processing/MACCROBAT/27773410.ann @@ -0,0 +1,306 @@ +T1 Age 2 13 69-year-old +T2 Sex 14 18 male +T3 History 19 27 diabetic +T4 Clinical_event 40 48 admitted +E1 Clinical_event:T4 +T5 Disease_disorder 60 89 left ventricular (LV) failure +E2 Disease_disorder:T5 +T6 Detailed_description 54 59 acute +R1 MODIFY Arg1:T6 Arg2:E2 +T7 Therapeutic_procedure 121 141 decongestive therapy +E3 Therapeutic_procedure:T7 +T8 Detailed_description 111 120 intensive +R2 MODIFY Arg1:T8 Arg2:E3 +T9 Sign_symptom 168 173 edema +E4 Sign_symptom:T9 +T10 Biological_structure 157 167 peripheral +R3 MODIFY Arg1:T10 Arg2:E4 +T11 Severity 150 156 severe +R4 MODIFY Arg1:T11 Arg2:E4 +T12 Sign_symptom 194 206 crepitations +E5 Sign_symptom:T12 +#1 AnnotatorNotes E5 crackling in the lungs +T13 Detailed_description 178 187 bilateral +T14 Detailed_description 188 193 basal +R5 MODIFY Arg1:T14 Arg2:E5 +R6 MODIFY Arg1:T13 Arg2:E5 +T15 Diagnostic_procedure 216 222 workup +E6 Diagnostic_procedure:T15 +T16 Diagnostic_procedure 249 258 troponine +E7 Diagnostic_procedure:T16 +T17 Lab_value 260 271 <0.01 ng/ml +T18 Lab_value 232 238 normal +R7 MODIFY Arg1:T17 Arg2:E7 +R8 MODIFY Arg1:T18 Arg2:E7 +T19 Diagnostic_procedure 277 283 CPK-MB +E8 Diagnostic_procedure:T19 +T20 Lab_value 285 294 4.6 ng/ml +R9 MODIFY Arg1:T20 Arg2:E8 +R10 MODIFY Arg1:T18 Arg2:E8 +T21 Disease_disorder 316 339 acute coronary syndrome +E9 Disease_disorder:T21 +A1 POLARITY E9 NEG +T22 Diagnostic_procedure 354 357 BNP +E10 Diagnostic_procedure:T22 +T23 Lab_value 362 372 1230 pg/ml +R11 MODIFY Arg1:T23 Arg2:E10 +T24 Disease_disorder 401 414 heart failure +E11 Disease_disorder:T24 +T25 Diagnostic_procedure 416 444 Echocardiographic assessment +E12 Diagnostic_procedure:T25 +T26 Diagnostic_procedure 454 458 LVEF +E13 Diagnostic_procedure:T26 +#2 AnnotatorNotes E13 left ventricular ejection fraction +T27 Lab_value 462 465 10% +R12 MODIFY Arg1:T27 Arg2:E13 +T28 Sign_symptom 471 495 dilated cardiac chambers +E14 Sign_symptom:T28 +T29 Diagnostic_procedure 511 545 pulmonary artery systolic pressure +E15 Diagnostic_procedure:T29 +T30 Diagnostic_procedure 547 551 PASP +E16 Diagnostic_procedure:T30 +R13 IDENTICAL Arg1:E16 Arg2:E15 +T31 Lab_value 557 568 70 mm of Hg +T32 Lab_value 574 614 features of raised LV diastolic pressure +R14 MODIFY Arg1:T31 Arg2:E15 +R15 MODIFY Arg1:T32 Arg2:E15 +T33 Diagnostic_procedure 616 627 Angiography +E17 Diagnostic_procedure:T33 +T34 Duration 642 654 after 3 days +E18 Duration:T34 +T35 Therapeutic_procedure 658 678 decongestive therapy +E19 Therapeutic_procedure:T35 +T36 Disease_disorder 703 724 triple vessel disease +E20 Disease_disorder:T36 +T37 Severity 694 702 critical +R16 MODIFY Arg1:T37 Arg2:E20 +T38 Disease_disorder 740 763 coronary artery disease +E21 Disease_disorder:T38 +T39 Biological_structure 730 739 left main +R17 MODIFY Arg1:T39 Arg2:E21 +T40 Therapeutic_procedure 793 797 CABG +E22 Therapeutic_procedure:T40 +#3 AnnotatorNotes E22 Coronary artery bypass grafting (surgery) +T41 Medication 822 831 frusemide +E23 Medication:T41 +T42 Administration 832 840 infusion +R18 MODIFY Arg1:T42 Arg2:E23 +T43 Medication 851 859 ramipril +E24 Medication:T43 +T44 Administration 846 850 oral +R19 MODIFY Arg1:T44 Arg2:E24 +T45 Medication 864 873 aldactone +E25 Medication:T45 +T46 Therapeutic_procedure 904 909 OPCAB +E26 Therapeutic_procedure:T46 +#4 AnnotatorNotes E26 Off-pump coronary artery bypass +T47 Date 910 922 1 week after +E27 Date:T47 +T48 Coreference 923 934 angiography +E28 Coreference:T48 +R20 IDENTICAL Arg1:E28 Arg2:E17 +T49 Diagnostic_procedure 936 950 Renal function +E29 Diagnostic_procedure:T49 +T50 Detailed_description 975 998 to adjust diuretic dose +R21 MODIFY Arg1:T50 Arg2:E29 +T51 Disease_disorder 1024 1045 end organ dysfunction +E30 Disease_disorder:T51 +A2 POLARITY E30 NEG +T52 Diagnostic_procedure 1047 1068 STS risk of mortality +E31 Diagnostic_procedure:T52 +#5 AnnotatorNotes E31 Society of Thoracic Surgery Risk Score +T53 Lab_value 1073 1077 2.4% +R22 MODIFY Arg1:T53 Arg2:E31 +T54 Diagnostic_procedure 1086 1114 echocardiographic assessment +E32 Diagnostic_procedure:T54 +T55 Clinical_event 780 788 referred +E33 Clinical_event:T55 +T56 Diagnostic_procedure 1139 1143 LVEF +E34 Diagnostic_procedure:T56 +T57 Lab_value 1124 1135 improvement +T58 Lab_value 1147 1150 15% +R23 MODIFY Arg1:T57 Arg2:E34 +R24 MODIFY Arg1:T58 Arg2:E34 +T59 Diagnostic_procedure 1167 1171 PASP +E35 Diagnostic_procedure:T59 +T60 Lab_value 1155 1163 decrease +R25 MODIFY Arg1:T60 Arg2:E35 +T61 Lab_value 1175 1183 30 mm Hg +R26 MODIFY Arg1:T61 Arg2:E35 +T62 Diagnostic_procedure 1200 1219 LV filling pressure +E36 Diagnostic_procedure:T62 +T63 Lab_value 1188 1196 decrease +R27 MODIFY Arg1:T63 Arg2:E36 +T64 Therapeutic_procedure 1221 1226 OPCAB +E37 Therapeutic_procedure:T64 +T65 Therapeutic_procedure 1249 1266 median sternotomy +E38 Therapeutic_procedure:T65 +R28 SUB_PROCEDURE Arg1:E38 Arg2:E37 +T66 Biological_structure 1268 1276 Left ITA +T67 Biological_structure 1299 1330 left anterior descending artery +T68 Biological_structure 1332 1335 LAD +R29 IDENTICAL Arg1:T68 Arg2:T67 +T69 Therapeutic_procedure 1290 1298 grafting +E39 Therapeutic_procedure:T69 +R30 MODIFY Arg1:T66 Arg2:E39 +R31 MODIFY Arg1:T67 Arg2:E39 +R32 SUB_PROCEDURE Arg1:E39 Arg2:E37 +T70 Therapeutic_procedure 1344 1359 revascularizing +E40 Therapeutic_procedure:T70 +T71 Biological_structure 1360 1363 LAD +R33 MODIFY Arg1:T71 Arg2:E40 +T72 Biological_structure 1365 1374 right ITA +T73 Biological_structure 1376 1380 RITA +R34 IDENTICAL Arg1:T73 Arg2:T72 +R35 MODIFY Arg1:T72 Arg2:E40 +T74 Biological_structure 1386 1388 RA +R36 MODIFY Arg1:T74 Arg2:E40 +R37 SUB_PROCEDURE Arg1:E40 Arg2:E37 +T75 Therapeutic_procedure 1400 1405 graft +E41 Therapeutic_procedure:T75 +T76 Therapeutic_procedure 1456 1471 revascularizing +E42 Therapeutic_procedure:T76 +R38 SUB_PROCEDURE Arg1:E41 Arg2:E37 +R39 SUB_PROCEDURE Arg1:E42 Arg2:E37 +T77 Biological_structure 1424 1442 distal end of RITA +T78 Biological_structure 1476 1491 diagonal artery +R40 MODIFY Arg1:T77 Arg2:E42 +R41 MODIFY Arg1:T78 Arg2:E42 +T79 Diagnostic_procedure 1539 1553 blood pressure +E43 Diagnostic_procedure:T79 +T80 Detailed_description 1530 1538 systolic +R42 MODIFY Arg1:T80 Arg2:E43 +T81 Lab_value 1515 1526 improvement +R43 MODIFY Arg1:T81 Arg2:E43 +T82 Detailed_description 1503 1514 significant +R44 MODIFY Arg1:T82 Arg2:T81 +T83 Therapeutic_procedure 1572 1583 anastomosis +E44 Therapeutic_procedure:T83 +T84 Detailed_description 1565 1571 distal +R45 MODIFY Arg1:T84 Arg2:E44 +T85 Therapeutic_procedure 1619 1664 lifted for lateral and posterior wall vessels +E45 Therapeutic_procedure:T85 +T86 Biological_structure 1609 1614 heart +R46 MODIFY Arg1:T86 Arg2:E45 +T87 Therapeutic_procedure 1683 1696 skin incision +E46 Therapeutic_procedure:T87 +T88 Therapeutic_procedure 2106 2116 ventilated +E47 Therapeutic_procedure:T88 +T89 Duration 2121 2127 2 days +E48 Duration:T89 +T90 Diagnostic_procedure 2129 2145 Echocardiography +E49 Diagnostic_procedure:T90 +T91 Date 2149 2156 1st POD +E50 Date:T91 +T92 Diagnostic_procedure 2181 2185 LVEF +E51 Diagnostic_procedure:T92 +T93 Lab_value 2189 2192 20% +R47 MODIFY Arg1:T93 Arg2:E51 +T94 Lab_value 2166 2177 improvement +R48 MODIFY Arg1:T94 Arg2:E51 +T95 Medication 2221 2234 beta blockers +E52 Medication:T95 +T96 Dosage 2212 2220 low dose +R49 MODIFY Arg1:T96 Arg2:E52 +T97 Medication 2241 2259 inotropic supports +E53 Medication:T97 +A3 POLARITY E53 NEG +T98 Clinical_event 2304 2312 recovery +E54 Clinical_event:T98 +T99 Lab_value 2284 2288 slow +T100 Lab_value 2293 2303 uneventful +R50 MODIFY Arg1:T100 Arg2:E54 +R51 MODIFY Arg1:T99 Arg2:E54 +T101 Diagnostic_procedure 2314 2330 Echocardiography +E55 Diagnostic_procedure:T101 +T102 Date 2334 2341 4th POD +E56 Date:T102 +T103 Diagnostic_procedure 2366 2370 LVEF +E57 Diagnostic_procedure:T103 +T104 Lab_value 2374 2377 30% +T105 Lab_value 2351 2362 improvement +R52 MODIFY Arg1:T104 Arg2:E57 +R53 MODIFY Arg1:T105 Arg2:E57 +T106 Sign_symptom 2407 2423 pleural drainage +E58 Sign_symptom:T106 +T107 Detailed_description 2396 2406 persistent +R54 MODIFY Arg1:T107 Arg2:E58 +T108 Nonbiological_location 2444 2463 intensive care unit +T109 Clinical_event 2464 2468 stay +E59 Clinical_event:T109 +R55 MODIFY Arg1:T108 Arg2:E59 +T110 Sign_symptom 2476 2492 pleural drainage +E60 Sign_symptom:T110 +A4 POLARITY E60 NEG +T111 Medication 2548 2557 diuretics +E61 Medication:T111 +T112 Clinical_event 2534 2544 discharged +E62 Clinical_event:T112 +T113 Medication 2568 2580 beta blocker +E63 Medication:T113 +T114 Dosage 2559 2567 low dose +R56 MODIFY Arg1:T114 Arg2:E63 +T115 Medication 2586 2594 ramipril +E64 Medication:T115 +T116 Therapeutic_procedure 2038 2049 anastamoses +E65 Therapeutic_procedure:T116 +T117 Lab_value 2026 2030 five +T118 Detailed_description 2031 2037 distal +R57 MODIFY Arg1:T118 Arg2:E65 +R58 MODIFY Arg1:T117 Arg2:E65 +T119 Medication 1877 1894 inotropic support +E66 Medication:T119 +T120 Dosage 1860 1873 Liberal doses +R59 MODIFY Arg1:T120 Arg2:E66 +T121 Therapeutic_procedure 1933 1941 grafting +E67 Therapeutic_procedure:T121 +T122 Detailed_description 1922 1932 sequential +R60 MODIFY Arg1:T122 Arg2:E67 +T123 Biological_structure 1906 1908 RA +R61 MODIFY Arg1:T123 Arg2:E67 +T124 Biological_structure 1945 1960 obtuse marginal +T125 Biological_structure 1962 1981 posterior LV branch +T126 Biological_structure 1987 2014 posterior descending artery +R62 MODIFY Arg1:T124 Arg2:E67 +R63 MODIFY Arg1:T125 Arg2:E67 +R64 MODIFY Arg1:T126 Arg2:E67 +T127 Therapeutic_procedure 1850 1858 position +E68 Therapeutic_procedure:T127 +T128 Detailed_description 1837 1849 lateral tilt +T129 Detailed_description 1825 1832 headlow +R65 MODIFY Arg1:T128 Arg2:E68 +#6 AnnotatorNotes T129 AKA Trendelenburg position +R66 MODIFY Arg1:T129 Arg2:E68 +T131 Therapeutic_procedure 1698 1714 open the sternum +E69 Therapeutic_procedure:T131 +T130 Therapeutic_procedure 1727 1746 release pericardium +E70 Therapeutic_procedure:T130 +* OVERLAP E1 E2 E3 E4 E5 E6 E7 E8 E9 E10 E11 E12 E13 E14 E15 +R67 BEFORE Arg1:E15 Arg2:E17 +R68 AFTER Arg1:E17 Arg2:E18 +* OVERLAP E18 E19 E20 E21 +R69 BEFORE Arg1:E21 Arg2:E33 +* OVERLAP E33 E22 E23 E24 E25 +R70 BEFORE Arg1:E25 Arg2:E26 +R71 AFTER Arg1:E26 Arg2:E27 +* OVERLAP E27 E28 +R72 BEFORE Arg1:E28 Arg2:E29 +* OVERLAP E29 E30 E31 +R73 BEFORE Arg1:E31 Arg2:E32 +* OVERLAP E32 E34 E35 E36 +R74 BEFORE Arg1:E36 Arg2:E37 +R75 BEFORE Arg1:E37 Arg2:E43 +R76 AFTER Arg1:E43 Arg2:E44 +R77 AFTER Arg1:E44 Arg2:E45 +* OVERLAP E45 E46 E69 E70 E68 E66 E67 E65 +R78 BEFORE Arg1:E65 Arg2:E47 +* OVERLAP E47 E48 +R79 BEFORE Arg1:E48 Arg2:E49 +* OVERLAP E49 E50 E51 +R80 BEFORE Arg1:E51 Arg2:E52 +* OVERLAP E52 E53 +R81 BEFORE Arg1:E53 Arg2:E54 +R82 BEFORE Arg1:E54 Arg2:E55 +* OVERLAP E55 E56 E57 E58 E59 +R83 BEFORE Arg1:E59 Arg2:E60 +* OVERLAP E60 E62 E61 E63 E64