--- a +++ b/processing/MACCROBAT/27661040.ann @@ -0,0 +1,384 @@ +T1 Age 25 36 16-year-old +T2 Sex 37 41 girl +T3 Sign_symptom 88 92 pain +E1 Sign_symptom:T3 +T4 Biological_structure 78 87 abdominal +T5 Severity 71 77 severe +R1 MODIFY Arg1:T4 Arg2:E1 +R2 MODIFY Arg1:T5 Arg2:E1 +T6 Sign_symptom 94 110 loss of appetite +E2 Sign_symptom:T6 +T7 Sign_symptom 112 118 nausea +E3 Sign_symptom:T7 +T8 Sign_symptom 124 132 vomiting +E4 Sign_symptom:T8 +T9 Family_history 184 201 family of potters +T10 Diagnostic_procedure 138 147 anamnesis +E5 Diagnostic_procedure:T10 +T11 Occupation 221 259 participated in the process of pottery +T12 Family_history 265 322 father being diagnosed with lead poisoning 2 years before +T13 Date 385 395 1 year ago +E6 Date:T13 +T14 Sign_symptom 432 436 pain +E7 Sign_symptom:T14 +T15 Biological_structure 422 431 abdominal +T16 Severity 415 421 severe +R3 MODIFY Arg1:T15 Arg2:E7 +R4 MODIFY Arg1:T16 Arg2:E7 +T17 Disease_disorder 465 477 appendicitis +E8 Disease_disorder:T17 +T18 Detailed_description 459 464 acute +R5 MODIFY Arg1:T18 Arg2:E8 +T19 Therapeutic_procedure 496 508 appendectomy +E9 Therapeutic_procedure:T19 +T20 Sign_symptom 518 522 pain +E10 Sign_symptom:T20 +T21 Detailed_description 523 532 persisted +R6 MODIFY Arg1:T21 Arg2:E10 +T22 Family_history 546 578 family history of lead poisoning +T23 Disease_disorder 597 612 saturnine colic +E11 Disease_disorder:T23 +T24 Disease_disorder 646 660 lead poisoning +E12 Disease_disorder:T24 +T25 Diagnostic_procedure 662 674 urinary lead +E13 Diagnostic_procedure:T25 +T26 Lab_value 676 684 219 μg/L +R7 MODIFY Arg1:T26 Arg2:E13 +T27 Therapeutic_procedure 709 730 symptomatic treatment +E14 Therapeutic_procedure:T27 +T28 Date 746 760 3 weeks before +E15 Date:T28 +T29 Clinical_event 794 802 admitted +E16 Clinical_event:T29 +T30 Nonbiological_location 810 827 regional hospital +R8 MODIFY Arg1:T30 Arg2:E16 +T31 Disease_disorder 852 867 saturnine colic +E17 Disease_disorder:T31 +T32 Diagnostic_procedure 869 879 blood lead +E18 Diagnostic_procedure:T32 +T33 Lab_value 881 892 113.2 μg/dL +R9 MODIFY Arg1:T33 Arg2:E18 +T34 Medication 899 916 chelation therapy +E19 Medication:T34 +T36 Date 928 941 4 days before +E20 Date:T36 +T35 Medication 922 926 EDTA +E21 Medication:T35 +R10 SUB_PROCEDURE Arg1:E21 Arg2:E19 +T37 Dosage 1001 1016 2 tablets daily +R11 MODIFY Arg1:T37 Arg2:E19 +T38 Dosage 1018 1059 one in the morning and one in the evening +R12 MODIFY Arg1:T38 Arg2:E19 +T39 Medication 1076 1095 calcium supplements +E22 Medication:T39 +T40 Diagnostic_procedure 1101 1121 clinical examination +E23 Diagnostic_procedure:T40 +T41 Sign_symptom 1203 1228 influenced general status +E24 Sign_symptom:T41 +T42 Sign_symptom 1230 1241 ailing face +E25 Sign_symptom:T42 +T43 Sign_symptom 1243 1251 jaundice +E26 Sign_symptom:T43 +T44 Biological_structure 1259 1265 sclera +R13 MODIFY Arg1:T44 Arg2:E26 +T45 Sign_symptom 1272 1284 pigmentation +E27 Sign_symptom:T45 +T46 Color 1267 1271 blue +R14 MODIFY Arg1:T46 Arg2:E27 +T47 Biological_structure 1292 1297 nails +R15 MODIFY Arg1:T47 Arg2:E27 +T48 Sign_symptom 1299 1306 painful +E28 Sign_symptom:T48 +T49 Biological_structure 1307 1314 abdomen +R16 MODIFY Arg1:T49 Arg2:E28 +T50 Detailed_description 1318 1327 palpation +R17 MODIFY Arg1:T50 Arg2:E28 +T51 Diagnostic_procedure 1333 1339 weight +E29 Diagnostic_procedure:T51 +T52 Lab_value 1341 1346 45 kg +R18 MODIFY Arg1:T52 Arg2:E29 +T53 Diagnostic_procedure 1352 1367 laboratory test +E30 Diagnostic_procedure:T53 +T54 Sign_symptom 1414 1420 anemia +E31 Sign_symptom:T54 +T55 Detailed_description 1402 1413 hypochromic +R19 MODIFY Arg1:T55 Arg2:E31 +T56 Diagnostic_procedure 1422 1432 hemoglobin +E32 Diagnostic_procedure:T56 +T57 Diagnostic_procedure 1434 1436 Hb +E33 Diagnostic_procedure:T57 +T58 Lab_value 1439 1448 10.9 g/dl +R20 MODIFY Arg1:T58 Arg2:E32 +R21 IDENTICAL Arg1:E33 Arg2:E32 +R22 SUB_PROCEDURE Arg1:E32 Arg2:E30 +T59 Diagnostic_procedure 1450 1460 hematocrit +E34 Diagnostic_procedure:T59 +T60 Diagnostic_procedure 1462 1465 Htc +E35 Diagnostic_procedure:T60 +T61 Lab_value 1468 1473 31.6% +R23 IDENTICAL Arg1:E35 Arg2:E34 +R24 MODIFY Arg1:T61 Arg2:E34 +T62 Diagnostic_procedure 1475 1497 medium cellular volume +E36 Diagnostic_procedure:T62 +T63 Diagnostic_procedure 1499 1502 MCV +E37 Diagnostic_procedure:T63 +R25 IDENTICAL Arg1:E37 Arg2:E36 +T64 Lab_value 1505 1512 77.6 fL +R26 MODIFY Arg1:T64 Arg2:E36 +R27 SUB_PROCEDURE Arg1:E36 Arg2:E30 +T65 Diagnostic_procedure 1534 1553 liver transaminases +E38 Diagnostic_procedure:T65 +T66 Lab_value 1515 1524 increased +R28 MODIFY Arg1:T66 Arg2:E38 +R29 SUB_PROCEDURE Arg1:E38 Arg2:E30 +T67 Diagnostic_procedure 1555 1579 alanine-aminotransferase +E39 Diagnostic_procedure:T67 +T68 Diagnostic_procedure 1581 1585 ALAT +E40 Diagnostic_procedure:T68 +R30 IDENTICAL Arg1:E40 Arg2:E39 +T69 Lab_value 1588 1597 158.9 U/L +R31 MODIFY Arg1:T69 Arg2:E39 +T70 Diagnostic_procedure 1599 1625 aspartate-aminotransferase +E41 Diagnostic_procedure:T70 +T71 Diagnostic_procedure 1627 1631 ASAT +E42 Diagnostic_procedure:T71 +R32 IDENTICAL Arg1:E42 Arg2:E41 +T72 Lab_value 1634 1640 63 U/L +R33 MODIFY Arg1:T72 Arg2:E41 +T73 Diagnostic_procedure 1642 1668 gamma-glutamyl-transferase +E43 Diagnostic_procedure:T73 +T74 Diagnostic_procedure 1670 1673 GGT +E44 Diagnostic_procedure:T74 +R34 IDENTICAL Arg1:E44 Arg2:E43 +T75 Lab_value 1676 1683 128 U/L +R35 MODIFY Arg1:T75 Arg2:E43 +R36 SUB_PROCEDURE Arg1:E39 Arg2:E38 +R37 SUB_PROCEDURE Arg1:E41 Arg2:E38 +R38 SUB_PROCEDURE Arg1:E43 Arg2:E38 +T76 Sign_symptom 1686 1715 conjugated hyperbilirubinemia +E45 Sign_symptom:T76 +T77 Diagnostic_procedure 1717 1733 direct bilirubin +E46 Diagnostic_procedure:T77 +T78 Diagnostic_procedure 1735 1738 DBi +E47 Diagnostic_procedure:T78 +R39 IDENTICAL Arg1:E47 Arg2:E46 +T79 Lab_value 1741 1752 1.432 mg/dL +R40 MODIFY Arg1:T79 Arg2:E46 +R41 SUB_PROCEDURE Arg1:E46 Arg2:E30 +T80 Sign_symptom 1755 1767 hyponatremia +E48 Sign_symptom:T80 +T81 Diagnostic_procedure 1769 1771 Na +E49 Diagnostic_procedure:T81 +T82 Lab_value 1773 1783 132 mmol/L +R42 MODIFY Arg1:T82 Arg2:E49 +T83 Sign_symptom 1790 1804 hypopotassemia +E50 Sign_symptom:T83 +T84 Diagnostic_procedure 1806 1807 K +E51 Diagnostic_procedure:T84 +T85 Lab_value 1809 1820 2.85 mmol/L +R43 MODIFY Arg1:T85 Arg2:E51 +T86 Diagnostic_procedure 1836 1853 arterial pressure +E52 Diagnostic_procedure:T86 +T87 Lab_value 1858 1867 156 mm Hg +T88 Detailed_description 1827 1835 systolic +R44 MODIFY Arg1:T88 Arg2:T87 +T89 Lab_value 1891 1899 96 mm Hg +T90 Detailed_description 1877 1886 diastolic +R45 MODIFY Arg1:T90 Arg2:T89 +R46 MODIFY Arg1:T87 Arg2:E52 +R47 MODIFY Arg1:T89 Arg2:E52 +T91 Diagnostic_procedure 1911 1915 lead +E53 Diagnostic_procedure:T91 +T92 Lab_value 1926 1937 66.28 μg/dL +T93 Lab_value 1959 1969 419.7 μg/L +T95 Diagnostic_procedure 2005 2030 delta-aminolevulinic acid +E54 Diagnostic_procedure:T95 +T96 Lab_value 2035 2044 7.66 mg/L +R51 MODIFY Arg1:T96 Arg2:E54 +T97 Diagnostic_procedure 2093 2103 ultrasound +E55 Diagnostic_procedure:T97 +T98 Biological_structure 2083 2092 abdominal +R52 MODIFY Arg1:T98 Arg2:E55 +T99 Sign_symptom 2121 2134 disappearance +E56 Sign_symptom:T99 +T100 Detailed_description 2142 2194 delimitation between the cortical and medullar parts +R53 MODIFY Arg1:T100 Arg2:E56 +T101 Biological_structure 2198 2210 both kidneys +R54 MODIFY Arg1:T101 Arg2:T100 +T102 Clinical_event 2225 2237 consultation +E57 Clinical_event:T102 +T103 Nonbiological_location 2246 2280 occupational healthcare specialist +R55 MODIFY Arg1:T103 Arg2:E57 +T104 Medication 2318 2335 chelation therapy +E58 Medication:T104 +T105 Medication 2341 2345 EDTA +E59 Medication:T105 +R56 SUB_PROCEDURE Arg1:E59 Arg2:E58 +T106 Dosage 2370 2383 4 tablets/day +R57 MODIFY Arg1:T106 Arg2:E58 +T107 Clinical_event 2417 2429 consultation +E60 Clinical_event:T107 +T108 Detailed_description 2404 2416 neurological +R58 MODIFY Arg1:T108 Arg2:E60 +T109 Disease_disorder 2479 2499 behavioral disorders +E61 Disease_disorder:T109 +T110 Disease_disorder 2505 2515 depressive +E62 Disease_disorder:T110 +T111 Diagnostic_procedure 2542 2555 psychotherapy +E63 Diagnostic_procedure:T111 +A1 POLARITY E63 UNCERTAIN +T112 Disease_disorder 2642 2656 lead poisoning +E64 Disease_disorder:T112 +T113 Medication 2687 2696 hydration +E65 Medication:T113 +T114 Administration 2682 2686 i.v. +R59 MODIFY Arg1:T114 Arg2:E65 +T115 Dosage 2747 2768 3 liters per 24 hours +R60 MODIFY Arg1:T115 Arg2:E65 +T116 Sign_symptom 2843 2848 vomit +E66 Sign_symptom:T116 +A2 POLARITY E66 NEG +T117 Sign_symptom 2862 2885 able to consume liquids +E67 Sign_symptom:T117 +T118 Medication 2901 2910 diuretics +E68 Medication:T118 +T119 Medication 2922 2932 furosemide +E69 Medication:T119 +T120 Administration 2933 2940 by vein +R61 MODIFY Arg1:T120 Arg2:E69 +R62 SUB_PROCEDURE Arg1:E69 Arg2:E68 +T121 Diagnostic_procedure 2964 2981 arterial pressure +E70 Diagnostic_procedure:T121 +T122 Lab_value 2992 3013 above the upper limit +R63 MODIFY Arg1:T122 Arg2:E70 +T123 Medication 3061 3100 angiotensin-converting enzyme inhibitor +E71 Medication:T123 +T124 Sign_symptom 3124 3145 arterial hypertension +E72 Sign_symptom:T124 +A3 TREND E72 DEC +T125 Medication 3193 3204 amino acids +E73 Medication:T125 +T126 Administration 3205 3218 intravenously +R64 MODIFY Arg1:T126 Arg2:E73 +T127 Medication 3236 3252 liver protectors +E74 Medication:T127 +T128 Administration 3253 3261 by mouth +R65 MODIFY Arg1:T128 Arg2:E74 +T129 Medication 3284 3309 vitamins of the B complex +E75 Medication:T129 +T130 Diagnostic_procedure 3363 3372 evolution +E76 Diagnostic_procedure:T130 +T131 Lab_value 3377 3395 slightly favorable +R66 MODIFY Arg1:T131 Arg2:E76 +T132 Date 3410 3422 3 days after +E77 Date:T132 +T133 Sign_symptom 3488 3492 pain +E78 Sign_symptom:T133 +T134 Sign_symptom 3494 3502 vomiting +E79 Sign_symptom:T134 +T135 Sign_symptom 3531 3535 pain +E80 Sign_symptom:T135 +T136 Biological_structure 3478 3487 abdominal +T137 Severity 3471 3477 severe +R67 MODIFY Arg1:T136 Arg2:E78 +R68 MODIFY Arg1:T137 Arg2:E78 +T138 Biological_structure 3543 3554 lumbar area +R69 MODIFY Arg1:T138 Arg2:E80 +T139 Diagnostic_procedure 3564 3585 laboratory parameters +E81 Diagnostic_procedure:T139 +T140 Lab_value 3596 3609 normalization +R70 MODIFY Arg1:T140 Arg2:E81 +T141 Duration 3630 3651 approximately 10 days +E82 Duration:T141 +T142 Therapeutic_procedure 3655 3664 treatment +E83 Therapeutic_procedure:T142 +T143 Date 3673 3680 6th day +E84 Date:T143 +T144 Medication 3709 3726 chelation therapy +E85 Medication:T144 +T145 Medication 3732 3736 EDTA +E86 Medication:T145 +R71 SUB_PROCEDURE Arg1:E86 Arg2:E85 +A4 POLARITY E85 NEG +T146 Clinical_event 3865 3876 discharging +E87 Clinical_event:T146 +T147 Diagnostic_procedure 3777 3781 lead +E88 Diagnostic_procedure:T147 +T148 Biological_structure 3759 3764 blood +T149 Biological_structure 3769 3776 urinary +R72 MODIFY Arg1:T149 Arg2:E88 +R73 MODIFY Arg1:T148 Arg2:E88 +T94 Biological_structure 1905 1910 blood +T150 Biological_structure 1943 1950 urinary +R48 MODIFY Arg1:T150 Arg2:T93 +R49 MODIFY Arg1:T94 Arg2:T92 +R50 MODIFY Arg1:T92 Arg2:E53 +R74 MODIFY Arg1:T93 Arg2:E53 +T151 Lab_value 3810 3821 45.57 μg/dL +T152 Lab_value 3847 3857 836.4 μg/L +T153 Coreference 3800 3805 level +E89 Coreference:T153 +R75 IDENTICAL Arg1:E89 Arg2:E88 +T154 Biological_structure 3794 3799 blood +T155 Biological_structure 3831 3838 urinary +R76 MODIFY Arg1:T154 Arg2:T151 +R77 MODIFY Arg1:T155 Arg2:T152 +R78 MODIFY Arg1:T152 Arg2:E89 +R79 MODIFY Arg1:T151 Arg2:E89 +T156 Diagnostic_procedure 3904 3914 ultrasound +E90 Diagnostic_procedure:T156 +T157 Biological_structure 3894 3903 abdominal +R80 MODIFY Arg1:T157 Arg2:E90 +T158 Sign_symptom 3940 3966 pathological modifications +E91 Sign_symptom:T158 +A5 POLARITY E91 NEG +T159 Date 3968 3981 After 14 days +E92 Date:T159 +T160 Clinical_event 4012 4022 discharged +E93 Clinical_event:T160 +T161 Sign_symptom 4035 4045 complaints +E94 Sign_symptom:T161 +A6 POLARITY E94 NEG +T162 Other_entity 4240 4428 Nevertheless, we intend to repeat the blood lead levels after 12 and 24 months, assessing also the renal (urea, creatinine, urinary exam) and hepatic functions (ASAT, ALAT, GGT, bilirubin) +#1 AnnotatorNotes T162 Omitted as this is planned work +T163 Other_entity 4047 4155;4156 4238 and we recommended no further exposure to lead, avoiding the contact and the working in the pottery process. The long-term outcome of this case depends on further exposure to this heavy metal +#2 AnnotatorNotes T163 Omitted as this is recommendation only +T164 Clinical_event 43 51 admitted +E95 Clinical_event:T164 +T165 Nonbiological_location 59 65 clinic +R81 MODIFY Arg1:T165 Arg2:E95 +* OVERLAP E95 E1 E2 E3 E4 E5 +R82 AFTER Arg1:E5 Arg2:E6 +* OVERLAP E6 E7 E8 E9 +R83 BEFORE Arg1:E9 Arg2:E10 +* OVERLAP E10 E11 E12 E13 E14 +R84 BEFORE Arg1:E14 Arg2:E15 +* OVERLAP E15 E16 E17 E18 +R85 BEFORE Arg1:E18 Arg2:E19 +* OVERLAP E19 E20 E22 +R86 BEFORE Arg1:E22 Arg2:E23 +* OVERLAP E23 E24 E25 E26 E27 E28 E29 E30 E31 E45 E48 E50 E52 E53 E54 E55 E56 +R87 BEFORE Arg1:E56 Arg2:E57 +* OVERLAP E57 E58 +R88 BEFORE Arg1:E58 Arg2:E60 +* OVERLAP E60 E61 E62 E63 +R89 BEFORE Arg1:E63 Arg2:E64 +R90 BEFORE Arg1:E64 Arg2:E65 +R91 BEFORE Arg1:E65 Arg2:E66 +* OVERLAP E66 E67 +R92 BEFORE Arg1:E67 Arg2:E68 +R93 BEFORE Arg1:E68 Arg2:E70 +* OVERLAP E70 E71 +R94 BEFORE Arg1:E71 Arg2:E72 +* OVERLAP E72 E73 E74 E75 +R95 BEFORE Arg1:E75 Arg2:E76 +* OVERLAP E76 E77 E78 E79 E80 +R96 BEFORE Arg1:E80 Arg2:E81 +* OVERLAP E81 E82 E83 +R97 AFTER Arg1:E83 Arg2:E84 +* OVERLAP E84 E85 E88 E89 +R98 BEFORE Arg1:E89 Arg2:E87 +R99 AFTER Arg1:E87 Arg2:E90 +* OVERLAP E90 E91 +R100 BEFORE Arg1:E91 Arg2:E92 +* OVERLAP E92 E93 E94