--- a +++ b/processing/MACCROBAT/26361640.ann @@ -0,0 +1,198 @@ +T1 Age 2 13 68-year-old +T2 Sex 14 20 female +T3 History 21 30 nonsmoker +T4 History 32 42 nondrinker +T5 Disease_disorder 69 81 hypertension +E1 Disease_disorder:T5 +T6 History 69 81 hypertension +T7 Clinical_event 82 91 presented +E2 Clinical_event:T7 +T8 Sign_symptom 116 124 jaundice +E3 Sign_symptom:T8 +T9 Sign_symptom 129 137 pruritus +E4 Sign_symptom:T9 +T10 Detailed_description 97 106 new-onset +T11 Detailed_description 107 115 painless +R1 MODIFY Arg1:T11 Arg2:E3 +R2 MODIFY Arg1:T10 Arg2:E3 +T12 Duration 141 152 three-month +E5 Duration:T12 +T13 Sign_symptom 171 182 weight loss +E6 Sign_symptom:T13 +T14 Lab_value 164 170 9.9 kg +R3 MODIFY Arg1:T14 Arg2:E6 +T15 Sign_symptom 195 203 diarrhea +E7 Sign_symptom:T15 +T16 Detailed_description 187 194 chronic +R4 MODIFY Arg1:T16 Arg2:E7 +T17 Diagnostic_procedure 228 243 bowel movements +E8 Diagnostic_procedure:T17 +T18 Lab_value 222 227 loose +T19 Lab_value 209 221 four to five +R5 MODIFY Arg1:T19 Arg2:E8 +R6 MODIFY Arg1:T18 Arg2:E8 +T20 Detailed_description 244 251 per day +R7 MODIFY Arg1:T20 Arg2:E8 +T21 Medication 253 264 Medications +E9 Medication:T21 +T22 Medication 274 283 vitamin D +E10 Medication:T22 +T23 Medication 285 295 amlodipine +E11 Medication:T23 +T24 Medication 300 310 eprosartan +E12 Medication:T24 +T25 Diagnostic_procedure 312 332 Physical examination +E13 Diagnostic_procedure:T25 +T26 Lab_value 337 343 normal +R8 MODIFY Arg1:T26 Arg2:E13 +T27 Sign_symptom 355 363 jaundice +E14 Sign_symptom:T27 +T28 Disease_disorder 368 382 muscle wasting +E15 Disease_disorder:T28 +T29 Diagnostic_procedure 391 402 colonoscopy +E16 Diagnostic_procedure:T29 +T30 Lab_value 412 418 normal +R9 MODIFY Arg1:T30 Arg2:E16 +T31 Diagnostic_procedure 437 446 bilirubin +E17 Diagnostic_procedure:T31 +T32 Lab_value 459 469 6.84 mg/dL +T33 Lab_value 471 484 116.96 μmol/L +T34 Lab_value 490 500 9.18 mg/dL +T35 Lab_value 502 515 156.98 μmol/L +R10 MODIFY Arg1:T32 Arg2:E17 +R11 MODIFY Arg1:T33 Arg2:E17 +R12 MODIFY Arg1:T34 Arg2:E17 +R13 MODIFY Arg1:T35 Arg2:E17 +T36 Detailed_description 420 425 Total +T37 Detailed_description 430 436 direct +R14 MODIFY Arg1:T37 Arg2:T34 +R15 MODIFY Arg1:T37 Arg2:T35 +R16 MODIFY Arg1:T36 Arg2:T32 +R17 MODIFY Arg1:T36 Arg2:T33 +T38 Diagnostic_procedure 558 588 international normalized ratio +E18 Diagnostic_procedure:T38 +T39 Lab_value 592 595 1.0 +R18 MODIFY Arg1:T39 Arg2:E18 +T40 Diagnostic_procedure 597 621 alanine aminotransferase +E19 Diagnostic_procedure:T40 +T41 Lab_value 628 635 247 U/L +R19 MODIFY Arg1:T41 Arg2:E19 +T42 Diagnostic_procedure 654 680 aspartate aminotransferase +E20 Diagnostic_procedure:T42 +T43 Lab_value 687 694 139 U/L +R20 MODIFY Arg1:T43 Arg2:E20 +T44 Diagnostic_procedure 716 736 alkaline phosphatase +E21 Diagnostic_procedure:T44 +T45 Lab_value 743 750 524 U/L +R21 MODIFY Arg1:T45 Arg2:E21 +T46 Diagnostic_procedure 775 801 Viral hepatitis serologies +E22 Diagnostic_procedure:T46 +T47 Diagnostic_procedure 807 833 antimitochondrial antibody +E23 Diagnostic_procedure:T47 +T48 Diagnostic_procedure 838 865 anti-smooth muscle antibody +E24 Diagnostic_procedure:T48 +T49 Lab_value 877 885 negative +R22 MODIFY Arg1:T49 Arg2:E24 +R23 MODIFY Arg1:T49 Arg2:E23 +R24 MODIFY Arg1:T49 Arg2:E22 +T50 Diagnostic_procedure 891 908 alpha-fetoprotein +E25 Diagnostic_procedure:T50 +T51 Lab_value 919 928 2.4 ng/mL +R25 MODIFY Arg1:T51 Arg2:E25 +T52 Diagnostic_procedure 948 975 total immunoglobulin (Ig) G +E26 Diagnostic_procedure:T52 +T53 Lab_value 980 990 1880 mg/dL +R26 MODIFY Arg1:T53 Arg2:E26 +T54 Diagnostic_procedure 1012 1037 carbohydrate antigen 19-9 +E27 Diagnostic_procedure:T54 +T55 Lab_value 1042 1050 856 U/mL +R27 MODIFY Arg1:T55 Arg2:E27 +T56 Diagnostic_procedure 1073 1077 IgG4 +E28 Diagnostic_procedure:T56 +T57 Lab_value 1082 1089 890 g/L +R28 MODIFY Arg1:T57 Arg2:E28 +T58 Diagnostic_procedure 1115 1125 ultrasound +E29 Diagnostic_procedure:T58 +T59 Detailed_description 1107 1114 Doppler +R29 MODIFY Arg1:T59 Arg2:E29 +T60 Diagnostic_procedure 1127 1170 magnetic resonance cholangiopancreatography +E30 Diagnostic_procedure:T60 +T61 Diagnostic_procedure 1175 1201 magnetic resonance imaging +E31 Diagnostic_procedure:T61 +T62 Biological_structure 1209 1214 liver +R30 MODIFY Arg1:T62 Arg2:E31 +T63 Sign_symptom 1254 1258 mass +E32 Sign_symptom:T63 +T64 Detailed_description 1237 1253 subtly enhancing +R31 MODIFY Arg1:T64 Arg2:E32 +T65 Distance 1260 1276 2.8 cm to 4.2 cm +R32 MODIFY Arg1:T65 Arg2:E32 +T66 Biological_structure 1311 1316 hilum +T67 Biological_structure 1321 1334 porta hepatis +R33 MODIFY Arg1:T66 Arg2:E32 +R34 MODIFY Arg1:T67 Arg2:E32 +T68 Sign_symptom 1336 1347 obstructing +E33 Sign_symptom:T68 +T69 Biological_structure 1357 1385 right and left hepatic ducts +R35 MODIFY Arg1:T69 Arg2:E33 +T70 Diagnostic_procedure 1409 1433 cholangiopancreatography +E34 Diagnostic_procedure:T70 +T71 Detailed_description 1398 1408 retrograde +T72 Detailed_description 1387 1397 Endoscopic +R36 MODIFY Arg1:T71 Arg2:E34 +R37 MODIFY Arg1:T72 Arg2:E34 +T73 Sign_symptom 1445 1455 strictures +E35 Sign_symptom:T73 +T74 Biological_structure 1463 1514 central portions of the right and left hepatic duct +R38 MODIFY Arg1:T74 Arg2:E35 +T75 Disease_disorder 1541 1559 cholangiocarcinoma +E36 Disease_disorder:T75 +A1 POLARITY E36 UNCERTAIN +T77 Diagnostic_procedure 1572 1589 Biliary brushings +E38 Diagnostic_procedure:T77 +T76 Lab_value 1595 1618 negative for malignancy +R39 MODIFY Arg1:T76 Arg2:E38 +T78 Diagnostic_procedure 1620 1646 Esophagogastroduodenoscopy +E37 Diagnostic_procedure:T78 +T79 Lab_value 1651 1657 normal +R40 MODIFY Arg1:T79 Arg2:E37 +T80 Diagnostic_procedure 1659 1667 Biopsies +E39 Diagnostic_procedure:T80 +T81 Biological_structure 1675 1691 ampulla of Vater +R41 MODIFY Arg1:T81 Arg2:E39 +T82 Disease_disorder 1716 1726 duodenitis +E40 Disease_disorder:T82 +T83 Detailed_description 1709 1715 active +T84 Detailed_description 1701 1708 chronic +R42 MODIFY Arg1:T83 Arg2:E40 +R43 MODIFY Arg1:T84 Arg2:E40 +T85 Diagnostic_procedure 1756 1770 ancillary test +E41 Diagnostic_procedure:T85 +T86 Lab_value 1771 1794 confirmed the diagnosis +R44 MODIFY Arg1:T86 Arg2:E41 +T87 Medication 1822 1837 corticosteroids +E42 Medication:T87 +T88 Disease_disorder 1892 1905 abnormalities +E43 Disease_disorder:T88 +A2 POLARITY E43 NEG +T89 Date 1906 1925 within three months +E44 Date:T89 +T90 Detailed_description 1863 1874 biochemical +T91 Detailed_description 1879 1891 radiological +R45 MODIFY Arg1:T91 Arg2:E43 +R46 MODIFY Arg1:T90 Arg2:E43 +R47 BEFORE Arg1:E1 Arg2:E2 +* OVERLAP E2 E3 E4 +R48 AFTER Arg1:E4 Arg2:E5 +* OVERLAP E5 E6 E7 E8 E9 +R49 SUB_PROCEDURE Arg1:E10 Arg2:E9 +R50 SUB_PROCEDURE Arg1:E11 Arg2:E9 +R51 SUB_PROCEDURE Arg1:E12 Arg2:E9 +R52 BEFORE Arg1:E9 Arg2:E13 +* OVERLAP E13 E14 E15 +R53 AFTER Arg1:E15 Arg2:E16 +R54 BEFORE Arg1:E16 Arg2:E17 +* OVERLAP E17 E18 E19 E20 E21 E22 E23 E24 E25 E26 E27 E28 E29 E30 E31 E32 E33 E34 E35 E36 E38 E37 E39 E40 E41 +R55 BEFORE Arg1:E41 Arg2:E42 +R56 BEFORE Arg1:E42 Arg2:E43 +* OVERLAP E43 E44