[fd8900]: / processing / MACCROBAT / 25759562.ann

Download this file

401 lines (400 with data), 13.5 kB

T1	Age 2 13	65-year-old
T2	Sex 14 19	woman
T3	Clinical_event 20 29	presented
E1	Clinical_event:T3 
T4	Sign_symptom 71 75	pain
E2	Sign_symptom:T4 
T5	Biological_structure 50 70	right upper quadrant
R1	MODIFY Arg1:T5 Arg2:E2	
T6	Date 77 94	Three years prior
E3	Date:T6 
T7	Disease_disorder 151 154	BCS
E4	Disease_disorder:T7 
#1	AnnotatorNotes E4	Budd-Chiari syndrome
T8	Detailed_description 140 150	idiopathic
R2	MODIFY Arg1:T8 Arg2:E4	
T9	Clinical_event 169 176	checkup
E5	Clinical_event:T9 
T10	Diagnostic_procedure 186 196	ultrasound
E6	Diagnostic_procedure:T10 
T11	Detailed_description 178 185	Doppler
R3	MODIFY Arg1:T11 Arg2:E6	
T12	Diagnostic_procedure 198 200	US
E7	Diagnostic_procedure:T12 
R4	IDENTICAL Arg1:E7 Arg2:E6	
T13	Sign_symptom 221 232	obstruction
E8	Sign_symptom:T13 
T14	Biological_structure 240 269	middle and left hepatic veins
R5	MODIFY Arg1:T14 Arg2:E8	
T15	Disease_disorder 305 318	thrombophilia
E9	Disease_disorder:T15 
A1	POLARITY E9 UNCERTAIN
T16	Medication 359 367	warfarin
E10	Medication:T16 
T17	Diagnostic_procedure 383 413	international normalized ratio
E11	Diagnostic_procedure:T17 
T18	Lab_value 414 429	between 2 and 3
E12	Lab_value:T18 
R6	MODIFY Arg1:E12 Arg2:E11	
T19	Clinical_event 513 520	consult
E13	Clinical_event:T19 
A2	POLARITY E13 NEG
T20	Duration 542 549	2 years
E14	Duration:T20 
T21	Date 448 469	after at least 1 year
E15	Date:T21 
T22	Detailed_description 477 491	non-compliance
R7	MODIFY Arg1:T22 Arg2:E10	
T23	Other_event 435 447	discontinued
E16	Other_event:T23 
#2	AnnotatorNotes E16	discontinued warfarin
T24	Sign_symptom 568 580	asymptomatic
E17	Sign_symptom:T24 
T25	Duration 589 601	past 3 years
E18	Duration:T25 
T26	Sign_symptom 675 679	pain
E19	Sign_symptom:T26 
T27	Frequency 662 674	intermittent
T28	Detailed_description 651 660	worsening
R8	MODIFY Arg1:T28 Arg2:E19	
R9	MODIFY Arg1:T27 Arg2:E19	
T29	Biological_structure 687 707	right upper quadrant
R10	MODIFY Arg1:T29 Arg2:E19	
T30	Diagnostic_procedure 767 787	Physical examination
E20	Diagnostic_procedure:T30 
T31	Sign_symptom 835 845	tenderness
E21	Sign_symptom:T31 
T32	Biological_structure 814 834	right upper quadrant
R11	MODIFY Arg1:T32 Arg2:E21	
T33	Sign_symptom 3262 3274	asymptomatic
E22	Sign_symptom:T33 
T34	Duration 3281 3287	1 year
E23	Duration:T34 
T35	Clinical_event 3291 3300	follow-up
E24	Clinical_event:T35 
T36	Medication 3240 3248	warfarin
E25	Medication:T36 
T37	Clinical_event 3216 3226	discharged
E26	Clinical_event:T37 
T38	Diagnostic_procedure 847 863	Laboratory tests
E27	Diagnostic_procedure:T38 
T39	Lab_value 873 888	mildly elevated
E28	Lab_value:T39 
T40	Diagnostic_procedure 889 898	bilirubin
E29	Diagnostic_procedure:T40 
T41	Lab_value 900 909	2.2 mg/dL
E30	Lab_value:T41 
T42	Diagnostic_procedure 915 922	albumin
E31	Diagnostic_procedure:T42 
T43	Lab_value 923 930	deficit
E32	Lab_value:T43 
T44	Lab_value 932 941	2.38 g/dL
E33	Lab_value:T44 
R12	MODIFY Arg1:E32 Arg2:E31	
R13	MODIFY Arg1:E33 Arg2:E31	
R14	MODIFY Arg1:E30 Arg2:E29	
R15	MODIFY Arg1:E28 Arg2:E29	
T45	Diagnostic_procedure 948 958	Child-Pugh
E34	Diagnostic_procedure:T45 
T46	Diagnostic_procedure 960 962	CP
E35	Diagnostic_procedure:T46 
R16	IDENTICAL Arg1:E35 Arg2:E34	
T47	Lab_value 974 975	8
E36	Lab_value:T47 
R17	MODIFY Arg1:E36 Arg2:E34	
T48	Diagnostic_procedure 977 1010	Model for End-Stage Liver Disease
E37	Diagnostic_procedure:T48 
T49	Diagnostic_procedure 1012 1016	MELD
E38	Diagnostic_procedure:T49 
R18	IDENTICAL Arg1:E38 Arg2:E37	
T50	Lab_value 1028 1030	11
E39	Lab_value:T50 
R19	MODIFY Arg1:E39 Arg2:E37	
T51	Diagnostic_procedure 1032 1041	Rotterdam
E40	Diagnostic_procedure:T51 
T52	Lab_value 1052 1056	0.15
E41	Lab_value:T52 
R20	MODIFY Arg1:E41 Arg2:E40	
T53	Diagnostic_procedure 1062 1087	BCS-TIPS prognostic index
E42	Diagnostic_procedure:T53 
T54	Diagnostic_procedure 1089 1100	BCS-TIPS PI
E43	Diagnostic_procedure:T54 
R21	IDENTICAL Arg1:E43 Arg2:E42	
T55	Lab_value 1112 1115	6.3
E44	Lab_value:T55 
R22	MODIFY Arg1:E44 Arg2:E42	
T56	Diagnostic_procedure 1137 1156	computed tomography
E45	Diagnostic_procedure:T56 
T57	Detailed_description 1119 1136	contrast-enhanced
R23	MODIFY Arg1:T57 Arg2:E45	
T58	Diagnostic_procedure 1158 1160	CT
E46	Diagnostic_procedure:T58 
R24	IDENTICAL Arg1:E46 Arg2:E45	
T59	Sign_symptom 1220 1232	hepatomegaly
E47	Sign_symptom:T59 
T60	Sign_symptom 1238 1249	hypertrophy
E48	Sign_symptom:T60 
T61	Diagnostic_procedure 3314 3330	laboratory tests
E49	Diagnostic_procedure:T61 
T62	Medication 2296 2314	conscious sedation
E50	Medication:T62 
T63	Diagnostic_procedure 3127 3136	recovered
E51	Diagnostic_procedure:T63 
T64	Lab_value 3137 3149	uneventfully
E52	Lab_value:T64 
T65	Sign_symptom 3195 3199	pain
E53	Sign_symptom:T65 
A3	POLARITY E53 NEG
T66	Biological_structure 3185 3194	abdominal
R25	MODIFY Arg1:T66 Arg2:E53	
T67	Date 3203 3206	2 d
E54	Date:T67 
R26	MODIFY Arg1:E52 Arg2:E51	
T68	Diagnostic_procedure 3347 3361	liver function
E55	Diagnostic_procedure:T68 
T69	Lab_value 3340 3346	normal
E56	Lab_value:T69 
R27	MODIFY Arg1:E56 Arg2:E55	
T70	Diagnostic_procedure 3375 3377	US
E57	Diagnostic_procedure:T70 
T71	Detailed_description 3367 3374	Doppler
R28	MODIFY Arg1:T71 Arg2:E57	
T72	Date 3403 3435	1, 3, 6, and 12 mo postprocedure
E58	Date:T72 
T73	Sign_symptom 3448 3460	patent shunt
E59	Sign_symptom:T73 
T74	Diagnostic_procedure 3466 3468	CP
E60	Diagnostic_procedure:T74 
T75	Diagnostic_procedure 3482 3486	MELD
E61	Diagnostic_procedure:T75 
T76	Diagnostic_procedure 3500 3509	Rotterdam
E62	Diagnostic_procedure:T76 
T77	Diagnostic_procedure 3530 3541	TIPS-BCS PI
E63	Diagnostic_procedure:T77 
T78	Lab_value 3479 3480	5
E64	Lab_value:T78 
T79	Lab_value 3497 3498	8
E65	Lab_value:T79 
T80	Lab_value 3520 3524	0.12
E66	Lab_value:T80 
T81	Lab_value 3552 3555	6.1
E67	Lab_value:T81 
R29	MODIFY Arg1:E64 Arg2:E60	
R30	MODIFY Arg1:E65 Arg2:E61	
R31	MODIFY Arg1:E66 Arg2:E62	
R32	MODIFY Arg1:E67 Arg2:E63	
T82	Diagnostic_procedure 3557 3559	CT
E68	Diagnostic_procedure:T82 
T83	History 1526 1556	no preceding history of trauma
T84	Clinical_event 2198 2205	brought
E69	Clinical_event:T84 
T85	Nonbiological_location 2213 2243	interventional radiology suite
R33	MODIFY Arg1:T85 Arg2:E69	
T86	Therapeutic_procedure 2316 2334	Portal vein access
E70	Therapeutic_procedure:T86 
T87	Date 1621 1639	3 years previously
E71	Date:T87 
T88	Sign_symptom 1174 1188	non-visualized
E72	Sign_symptom:T88 
T89	Biological_structure 1189 1218	middle and left hepatic veins
R34	MODIFY Arg1:T89 Arg2:E72	
T90	Diagnostic_procedure 3039 3070	portosystemic pressure gradient
E73	Diagnostic_procedure:T90 
T91	Diagnostic_procedure 3072 3075	PPG
E74	Diagnostic_procedure:T91 
R35	IDENTICAL Arg1:E74 Arg2:E73	
T92	Lab_value 3081 3090	decreased
E75	Lab_value:T92 
T93	Lab_value 3096 3103	19 mmHg
E76	Lab_value:T93 
T94	Lab_value 3107 3113	8 mmHg
E77	Lab_value:T94 
R36	MODIFY Arg1:E75 Arg2:E73	
R37	MODIFY Arg1:E76 Arg2:E73	
R38	MODIFY Arg1:E77 Arg2:E73	
A4	TREND E19 INC
T95	Sign_symptom 732 765	associated or alleviating factors
E78	Sign_symptom:T95 
A5	POLARITY E78 NEG
T96	Biological_structure 1257 1269	caudate lobe
T97	Sign_symptom 1271 1283	splenomegaly
E79	Sign_symptom:T97 
T98	Sign_symptom 1293 1311	venous collaterals
E80	Sign_symptom:T98 
T99	Biological_structure 1285 1292	hepatic
R39	MODIFY Arg1:T99 Arg2:E80	
T100	Sign_symptom 1328 1336	aneurysm
E81	Sign_symptom:T100 
T101	Detailed_description 1319 1327	saccular
R40	MODIFY Arg1:T101 Arg2:E81	
T102	Biological_structure 1352 1388	extrahepatic portal vein main branch
T103	Distance 1399 1415	3.2 cm in height
T104	Area 1420 1447	2.5 cm × 2.4 cm in diameter
R41	MODIFY Arg1:T102 Arg2:E81	
R42	MODIFY Arg1:T103 Arg2:E81	
R43	MODIFY Arg1:T104 Arg2:E81	
T105	Sign_symptom 1466 1474	aneurysm
E82	Sign_symptom:T105 
T106	Disease_disorder 1509 1512	BCS
E83	Disease_disorder:T106 
T107	Disease_disorder 1550 1556	trauma
E84	Disease_disorder:T107 
A6	POLARITY E84 NEG
T108	Diagnostic_procedure 1596 1598	US
E85	Diagnostic_procedure:T108 
T109	Detailed_description 1588 1595	Doppler
R44	MODIFY Arg1:T109 Arg2:E85	
T110	Sign_symptom 1669 1676	ascites
E86	Sign_symptom:T110 
A7	POLARITY E86 NEG
T111	Sign_symptom 1689 1697	bleeding
E87	Sign_symptom:T111 
A8	POLARITY E87 NEG
T112	Biological_structure 1680 1688	variceal
R45	MODIFY Arg1:T112 Arg2:E87	
T113	Therapeutic_procedure 1733 1737	TIPS
E88	Therapeutic_procedure:T113 
#3	AnnotatorNotes E88	Transjugular intrahepatic portosystemic shunt
T114	Sign_symptom 1772 1783	obstruction
E89	Sign_symptom:T114 
T115	Biological_structure 1749 1763	hepatic venous
R46	MODIFY Arg1:T115 Arg2:E89	
T116	Detailed_description 1764 1771	outflow
R47	MODIFY Arg1:T116 Arg2:E89	
T117	Sign_symptom 1806 1810	pain
E90	Sign_symptom:T117 
A9	TREND E90 INC
T118	Disease_disorder 1827 1840	complications
E91	Disease_disorder:T118 
A10	POLARITY E91 MAYBE_POS
T119	Sign_symptom 1848 1856	aneurysm
E92	Sign_symptom:T119 
T120	Sign_symptom 1886 1894	aneurysm
E93	Sign_symptom:T120 
T121	Therapeutic_procedure 1863 1878	direct approach
E94	Therapeutic_procedure:T121 
A11	POLARITY E94 NEG
T122	Sign_symptom 1979 1991	hypertension
E95	Sign_symptom:T122 
T123	Biological_structure 1972 1978	portal
R48	MODIFY Arg1:T123 Arg2:E95	
T124	Therapeutic_procedure 1997 2011	stent-grafting
E96	Therapeutic_procedure:T124 
A12	POLARITY E96 UNCERTAIN
T125	Sign_symptom 2103 2114	obstruction
E97	Sign_symptom:T125 
T126	Sign_symptom 2130 2143	thrombophilia
E98	Sign_symptom:T126 
T127	Biological_structure 2080 2094	hepatic venous
T128	Detailed_description 2095 2102	outflow
R49	MODIFY Arg1:T128 Arg2:E97	
R50	MODIFY Arg1:T127 Arg2:E97	
T129	Diagnostic_procedure 2381 2392	fluoroscopy
E99	Diagnostic_procedure:T129 
T130	Diagnostic_procedure 2398 2409	portography
E100	Diagnostic_procedure:T130 
T131	Biological_structure 2356 2374	right hepatic vein
R51	MODIFY Arg1:T131 Arg2:E70	
T132	Sign_symptom 2428 2436	aneurysm
E101	Sign_symptom:T132 
T133	Detailed_description 2419 2427	saccular
R52	MODIFY Arg1:T133 Arg2:E101	
T134	Biological_structure 2452 2468	main portal vein
R53	MODIFY Arg1:T134 Arg2:E101	
T135	Sign_symptom 2505 2515	thrombosis
E102	Sign_symptom:T135 
T136	Biological_structure 2480 2504	intrahepatic portal vein
R54	MODIFY Arg1:T136 Arg2:E102	
T137	Severity 2470 2479	extensive
R55	MODIFY Arg1:T137 Arg2:E102	
T138	Sign_symptom 2539 2546	varices
E103	Sign_symptom:T138 
T139	Biological_structure 2527 2538	splenorenal
T140	Severity 2521 2526	small
R56	MODIFY Arg1:T139 Arg2:E103	
R57	MODIFY Arg1:T140 Arg2:E103	
T141	Therapeutic_procedure 2627 2638	stent-graft
E104	Therapeutic_procedure:T141 
T142	Detailed_description 2587 2610	polytetrafluoroethylene
T143	Detailed_description 2612 2617	ePTFE
R58	IDENTICAL Arg1:T143 Arg2:T142	
R59	MODIFY Arg1:T142 Arg2:E104	
T144	Detailed_description 2619 2626	covered
R60	MODIFY Arg1:T144 Arg2:E104	
T145	Detailed_description 2578 2586	expanded
T146	Detailed_description 2563 2577	10-mm diameter
R61	MODIFY Arg1:T145 Arg2:E104	
R62	MODIFY Arg1:T146 Arg2:E104	
T147	Detailed_description 2640 2652	Fluency Plus
T148	Detailed_description 2654 2709	Bard Peripheral Vascular, Tempe, Arizona, United States
R63	MODIFY Arg1:T147 Arg2:E104	
R64	MODIFY Arg1:T148 Arg2:E104	
T149	Biological_structure 2735 2758	liver parenchymal tract
R65	MODIFY Arg1:T149 Arg2:E104	
T150	Therapeutic_procedure 2774 2785	stent-graft
E105	Therapeutic_procedure:T150 
T151	Biological_structure 2795 2817	main portal vein trunk
R66	MODIFY Arg1:T151 Arg2:E105	
T152	Sign_symptom 2831 2839	aneurysm
E106	Sign_symptom:T152 
A13	POLARITY E105 NEG
T153	Sign_symptom 2881 2889	obstruct
E107	Sign_symptom:T153 
A14	POLARITY E107 NEG
T154	Biological_structure 2908 2928	portal vein branches
R67	MODIFY Arg1:T154 Arg2:E107	
T155	Diagnostic_procedure 2941 2952	portography
E108	Diagnostic_procedure:T155 
T156	Sign_symptom 3005 3013	aneurysm
E109	Sign_symptom:T156 
A15	TREND E109 DEC
T159	Sign_symptom 3582 3590	aneurysm
E111	Sign_symptom:T159 
A16	TREND E111 DEC
T160	Distance 3616 3632	2.4 cm in height
T161	Area 3637 3664	2.0 cm × 1.9 cm in diameter
R69	MODIFY Arg1:T160 Arg2:E111	
R70	MODIFY Arg1:T161 Arg2:E111	
T162	Date 3668 3678	3 mo after
E112	Date:T162 
T163	Therapeutic_procedure 3679 3683	TIPS
E113	Therapeutic_procedure:T163 
T164	Distance 3726 3742	1.9 cm in height
T165	Area 3747 3774	1.6 cm × 1.5 cm in diameter
T166	Date 3778 3784	1 year
E114	Date:T166 
R71	MODIFY Arg1:T164 Arg2:E111	
R72	MODIFY Arg1:T165 Arg2:E111	
*	OVERLAP E1 E2
R73	AFTER Arg1:E2 Arg2:E3	
*	OVERLAP E3 E4 E5 E6 E8 E9 E10 E11
R74	BEFORE Arg1:E11 Arg2:E16	
*	OVERLAP E16 E15
R75	BEFORE Arg1:E15 Arg2:E13	
*	OVERLAP E13 E14
R76	BEFORE Arg1:E14 Arg2:E17	
*	OVERLAP E17 E18
R77	BEFORE Arg1:E18 Arg2:E19	
*	OVERLAP E19 E78 E20 E21 E27 E34 E37 E40 E42 E45 E72 E47 E48 E79 E80 E81 E82 E83
R78	SUB_PROCEDURE Arg1:E29 Arg2:E27	
R79	SUB_PROCEDURE Arg1:E31 Arg2:E27	
R80	MODIFY Arg1:T96 Arg2:E48	
R81	AFTER Arg1:E83 Arg2:E84	
*	OVERLAP E84 E85 E71
R82	BEFORE Arg1:E71 Arg2:E86	
*	OVERLAP E86 E87 E88 E89 E90 E91 E92 E94 E95 E96 E97 E98 E69 E50 E70 E99 E100 E101 E102 E103 E104 E105 E106 E107
#4	AnnotatorNotes E96	this was not considered but was later performed anyway
R83	BEFORE Arg1:E107 Arg2:E108	
R84	BEFORE Arg1:E73 Arg2:E51	
R85	BEFORE Arg1:E51 Arg2:E53	
*	OVERLAP E53 E54
R86	BEFORE Arg1:E54 Arg2:E26	
*	OVERLAP E26 E25
R87	BEFORE Arg1:E25 Arg2:E22	
*	OVERLAP E22 E23 E24 E49 E55 E57 E58 E59 E60 E61 E62 E63 E68 E111
T157	Sign_symptom 2969 2981	patent shunt
E110	Sign_symptom:T157 
*	OVERLAP E108 E110 E109 E73
R68	AFTER Arg1:E111 Arg2:E112	
*	OVERLAP E112 E113
R88	BEFORE Arg1:E113 Arg2:E114