added	data/Exploratory barcharts/Multiplot_barcharts_vertical.tiff
added	data/Exploratory barcharts/Response_barchart.tiff
added	data/Exploratory barcharts/Treatment_barchart.tiff
added	data/Exploratory barcharts/pam50_barchart.tiff
added	data/Exploratory barcharts/sample_patient_barchart.tiff
added	data/Expression Matrices/matrixC1.csv
added	data/Expression Matrices/matrixC3.csv
added	data/Output sets/Downstream/Cluster_PCA.tiff
added	data/Output sets/Downstream/Clustering.xlsx
added	data/Output sets/Downstream/Consensus_index.tiff
added	data/Output sets/Downstream/DGEA.xlsx
added	data/Output sets/Downstream/DT.xlsx
added	data/Output sets/Downstream/Entropy.tiff
added	data/Output sets/Downstream/Final_model_variable_importance.tiff
added	data/Output sets/Downstream/Final_model_variable_importance_vertical.tiff
added	data/Output sets/Downstream/LogR.xlsx
added	data/Output sets/Downstream/Multiplot_cluster_PCA.tiff
added	data/Output sets/Downstream/Multiplot_cluster_barcharts.tiff
added	data/Output sets/Downstream/NRS_genes_clusters_heatmap.tiff
added	data/Output sets/Downstream/RCSI.tiff
added	data/Output sets/Downstream/SVM.xlsx
added	data/Output sets/Downstream/Stat_Sig.tiff
added	data/Output sets/Downstream/Validation_ROC_plots/C5_ROC_all_together.tiff
added	data/Output sets/Downstream/Validation_ROC_plots/C5_ROC_cluster_meta.tiff
added	data/Output sets/Downstream/Validation_ROC_plots/C5_ROC_gs_meta.tiff