added	Publication/Supplementary Figures/KEGG_top10_dotplot_clustered.tiff
added	Publication/Supplementary Figures/KEGG_top10_term_gene_heatmap.tiff
added	Publication/Supplementary Figures/MDS.tiff
added	Publication/Supplementary Figures/Multiplot_cluster_barcharts.tiff
added	Publication/Supplementary Figures/Original_heatmap.tiff
added	Publication/Supplementary Figures/RBE_MDS.tiff
added	Publication/Supplementary Figures/RBE_heatmap.tiff
added	Publication/Supplementary Figures/RCSI.tiff
added	Publication/Supplementary Figures/Reactome_top10_dotplot_clustered.tiff
added	Publication/Supplementary Figures/Reactome_top10_term_gene_heatmap.tiff
added	Publication/Supplementary Figures/z_MDS.tiff
added	Publication/Supplementary Figures/z_heatmap.tiff
added	QC/3D_PCA_norm_data.tiff
added	QC/3D_PCA_raw_data.tiff
added	QC/MDS.tiff
added	QC/Original_heatmap.tiff
added	QC/RBE_MDS.tiff
added	QC/RBE_heatmap.tiff
added	QC/z_MDS.tiff
added	QC/z_heatmap.tiff
added	README.md
added	R_scripts/DGEA_ML_Networks.R
added	R_scripts/DGEA_ML_PATHWAYS_session_info
added	R_scripts/Exploratory_barcharts.R
added	R_scripts/Genefu_functions.R