Models:
Joseph Gordon
joseph-gordon/
bc_ml_pub
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[3e731f]: / COSMIC_BC_21042022.xlsx

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# Gene name Mutated samples Samples tested Percentage Ratio
1 PIK3CA 6755 23254 29.05% 0.2904876580373269
2 TP53 5226 19718 26.5% 0.2650370220103459
3 PIK3CA_ENST00000643187 4735 23254 20.36% 0.20362088242882945
4 TP53_ENST00000610292 4151 19718 21.05% 0.21051830814484226
5 TP53_ENST00000620739 4151 19718 21.05% 0.21051830814484226
6 TP53_ENST00000619485 4151 19718 21.05% 0.21051830814484226
7 TP53_ENST00000445888 4151 19718 21.05% 0.21051830814484226
8 TP53_ENST00000455263 4151 19718 21.05% 0.21051830814484226
9 TP53_ENST00000610538 4151 19718 21.05% 0.21051830814484226
10 TP53_ENST00000622645 4151 19718 21.05% 0.21051830814484226
11 TP53_ENST00000617185 4151 19718 21.05% 0.21051830814484226
12 TP53_ENST00000420246 4151 19718 21.05% 0.21051830814484226
13 TP53_ENST00000413465 4150 19718 21.05% 0.2104675930621767
14 TP53_ENST00000359597 4149 19718 21.04% 0.2104168779795111
15 TP53_ENST00000615910 4148 19718 21.04% 0.2103661628968455
16 TP53_ENST00000510385 3822 19718 19.38% 0.1938330459478649
17 TP53_ENST00000619186 3822 19718 19.38% 0.1938330459478649
18 TP53_ENST00000504290 3822 19718 19.38% 0.1938330459478649
19 TP53_ENST00000618944 3822 19718 19.38% 0.1938330459478649
20 TP53_ENST00000610623 3822 19718 19.38% 0.1938330459478649
21 TP53_ENST00000504937 3822 19718 19.38% 0.1938330459478649
22 CDH1 1166 9632 12.11% 0.1210548172757475
23 CDH1_ENST00000612417 1100 9632 11.42% 0.11420265780730897
24 CDH1_ENST00000621016 1100 9632 11.42% 0.11420265780730897
25 CDH1_ENST00000611625 1100 9632 11.42% 0.11420265780730897
26 CDH1_ENST00000422392 1099 9632 11.41% 0.11409883720930232
27 MED12 1038 9311 11.15% 0.1114810439265385
28 ESR1 997 12264 8.13% 0.08129484670580561
29 GATA3 970 8723 11.12% 0.11120027513470136
30 GATA3_ENST00000645492 949 8723 10.88% 0.10879284649776454
31 GATA3_ENST00000346208 949 8723 10.88% 0.10879284649776454
32 KMT2C 939 7629 12.31% 0.12308297286669288
33 MED12_ENST00000374102 913 9311 9.81% 0.0980560627215122
34 MED12_ENST00000333646 913 9311 9.81% 0.0980560627215122
35 KMT2C_ENST00000355193 901 7629 11.81% 0.11810197928955302
36 ESR1_ENST00000443427 826 12264 6.74% 0.06735159817351598
37 ESR1_ENST00000206249 825 12264 6.73% 0.06727005870841488
38 ESR1_ENST00000427531 825 12264 6.73% 0.06727005870841488
39 ESR1_ENST00000338799 823 12264 6.71% 0.06710697977821266
40 ESR1_ENST00000456483 820 12264 6.69% 0.06686236138290932
41 ESR1_ENST00000406599 820 12264 6.69% 0.06686236138290932
42 MAP3K1 710 8294 8.56% 0.0856040511212925
43 TTN 700 2979 23.5% 0.23497818059751593
44 TTN_ENST00000460472 700 2979 23.5% 0.23497818059751593
45 TTN_ENST00000342992 700 2979 23.5% 0.23497818059751593
46 TTN_ENST00000591111 700 2979 23.5% 0.23497818059751593
47 TTN_ENST00000359218 699 2979 23.46% 0.23464249748237664
48 TTN_ENST00000615779 699 2979 23.46% 0.23464249748237664
49 TTN_ENST00000342175 699 2979 23.46% 0.23464249748237664
50 CSMD1_ENST00000602723 678 2909 23.31% 0.2330697834307322
51 CSMD1_ENST00000400186 678 2909 23.31% 0.2330697834307322
52 CSMD1 678 2909 23.31% 0.2330697834307322
53 CSMD1_ENST00000520002 678 2909 23.31% 0.2330697834307322
54 CSMD1_ENST00000602557 678 2909 23.31% 0.2330697834307322
55 DMD_ENST00000620040 634 2798 22.66% 0.226590421729807
56 DMD_ENST00000378677 634 2798 22.66% 0.226590421729807
57 DMD 634 2798 22.66% 0.226590421729807
58 DMD_ENST00000619831 634 2798 22.66% 0.226590421729807
59 RYR2 620 2772 22.37% 0.22366522366522368
60 CSMD1_ENST00000537824 619 2909 21.28% 0.21278789962186317
61 PTPRD 608 5647 10.77% 0.10766778820612714
62 PTEN 607 10731 5.66% 0.056565091790140715
63 RBFOX1_ENST00000641259 599 2814 21.29% 0.212864250177683
64 RBFOX1_ENST00000550418 593 2814 21.07% 0.2107320540156361
65 RBFOX1_ENST00000547372 591 2814 21% 0.21002132196162046
66 CNTNAP2 590 2750 21.45% 0.21454545454545454
67 RBFOX1_ENST00000553186 590 2814 20.97% 0.20966595593461265
68 CTNNA2_ENST00000466387 589 2905 20.28% 0.2027538726333907
69 RBFOX1 588 2814 20.9% 0.208955223880597
70 LRP1B 586 3143 18.64% 0.18644607063315305
71 CSMD3 581 2927 19.85% 0.1984967543559959
72 CSMD3_ENST00000455883 581 2927 19.85% 0.1984967543559959
73 AF241726.2 578 2745 21.06% 0.2105646630236794
74 RYR2_ENST00000360064 573 2772 20.67% 0.2067099567099567
75 CSMD3_ENST00000343508 569 2927 19.44% 0.19439699350871198
76 RBFOX1_ENST00000552089 562 2814 19.97% 0.19971570717839374
77 RBFOX1_ENST00000535565 561 2814 19.94% 0.19936034115138593
78 CTNNA2_ENST00000629316 559 2905 19.24% 0.19242685025817555
79 CTNNA2_ENST00000496558 559 2905 19.24% 0.19242685025817555
80 ERBB4 551 8799 6.26% 0.06262075235822252
81 RBFOX1_ENST00000547338 550 2814 19.55% 0.19545131485429992
82 USH2A 550 2833 19.41% 0.1941404871161313
83 NRXN3_ENST00000634499 546 2787 19.59% 0.19590958019375673
84 IL1RAPL1 545 2750 19.82% 0.19818181818181818
85 DCC 542 2984 18.16% 0.1816353887399464
86 ZFHX3 542 4637 11.69% 0.1168859176191503
87 EYS_ENST00000503581 541 2924 18.5% 0.1850205198358413
88 EYS 541 2924 18.5% 0.1850205198358413
89 TMEM132D 540 2750 19.64% 0.19636363636363635
90 CTNNA2 540 2905 18.59% 0.18588640275387264
91 NRXN3 540 2787 19.38% 0.193756727664155
92 ERBB4_ENST00000436443 538 8799 6.11% 0.06114331173997045
93 NF1 534 8556 6.24% 0.06241234221598878
94 GPC5 533 2786 19.13% 0.19131371141421394
95 CTNNA3 531 2885 18.41% 0.18405545927209704
96 ERBB2 530 11291 4.69% 0.04694004074041272
97 NRXN3_ENST00000554719 528 2787 18.95% 0.18945102260495156
98 DPP10_ENST00000410059 527 2771 19.02% 0.1901840490797546
99 PCDH15_ENST00000373965 525 2813 18.66% 0.18663348738002133
100 ROBO2 525 2870 18.29% 0.18292682926829268