--- a +++ b/environment.yaml @@ -0,0 +1,257 @@ +name: MLEAsm +channels: + - conda-forge + - https://repo.anaconda.com/pkgs/main + - https://repo.anaconda.com/pkgs/r +dependencies: + - _libgcc_mutex=0.1=conda_forge + - _openmp_mutex=4.5=2_gnu + - _py-xgboost-mutex=2.0=gpu_0 + - alsa-lib=1.2.13=hb9d3cd8_0 + - asttokens=2.4.1=pyhd8ed1ab_0 + - attrs=24.2.0=pyh71513ae_0 + - brotli=1.1.0=hb9d3cd8_2 + - brotli-bin=1.1.0=hb9d3cd8_2 + - bzip2=1.0.8=h4bc722e_7 + - ca-certificates=2024.8.30=hbcca054_0 + - cairo=1.18.0=hebfffa5_3 + - certifi=2024.8.30=pyhd8ed1ab_0 + - comm=0.2.2=pyhd8ed1ab_0 + - contourpy=1.3.1=py310h3788b33_0 + - cuda-version=11.8=h70ddcb2_3 + - cycler=0.12.1=pyhd8ed1ab_0 + - cyrus-sasl=2.1.27=h54b06d7_7 + - dbus=1.13.6=h5008d03_3 + - debugpy=1.8.9=py310hf71b8c6_0 + - decorator=5.1.1=pyhd8ed1ab_0 + - double-conversion=3.3.0=h59595ed_0 + - et_xmlfile=2.0.0=pyhd8ed1ab_0 + - exceptiongroup=1.2.2=pyhd8ed1ab_0 + - executing=2.1.0=pyhd8ed1ab_0 + - expat=2.6.4=h5888daf_0 + - font-ttf-dejavu-sans-mono=2.37=hab24e00_0 + - font-ttf-inconsolata=3.000=h77eed37_0 + - font-ttf-source-code-pro=2.038=h77eed37_0 + - font-ttf-ubuntu=0.83=h77eed37_3 + - fontconfig=2.15.0=h7e30c49_1 + - fonts-conda-ecosystem=1=0 + - fonts-conda-forge=1=0 + - fonttools=4.55.0=py310h89163eb_0 + - freetype=2.12.1=h267a509_2 + - graphite2=1.3.13=h59595ed_1003 + - harfbuzz=9.0.0=hda332d3_1 + - icu=75.1=he02047a_0 + - imbalanced-learn=0.12.4=pyhd8ed1ab_0 + - importlib-metadata=8.5.0=pyha770c72_0 + - importlib_resources=6.4.5=pyhd8ed1ab_0 + - ipykernel=6.29.5=pyh3099207_0 + - ipython=8.29.0=pyh707e725_0 + - jedi=0.19.2=pyhff2d567_0 + - joblib=1.4.2=pyhd8ed1ab_0 + - jsonschema=4.23.0=pyhd8ed1ab_0 + - jsonschema-specifications=2024.10.1=pyhd8ed1ab_0 + - jupyter_client=8.6.3=pyhd8ed1ab_0 + - jupyter_core=5.7.2=pyh31011fe_1 + - keyutils=1.6.1=h166bdaf_0 + - kiwisolver=1.4.7=py310h3788b33_0 + - krb5=1.21.3=h659f571_0 + - lcms2=2.16=hb7c19ff_0 + - ld_impl_linux-64=2.43=h712a8e2_2 + - lerc=4.0.0=h27087fc_0 + - libblas=3.9.0=25_linux64_openblas + - libbrotlicommon=1.1.0=hb9d3cd8_2 + - libbrotlidec=1.1.0=hb9d3cd8_2 + - libbrotlienc=1.1.0=hb9d3cd8_2 + - libcblas=3.9.0=25_linux64_openblas + - libclang-cpp19.1=19.1.4=default_hb5137d0_0 + - libclang13=19.1.4=default_h9c6a7e4_0 + - libcups=2.3.3=h4637d8d_4 + - libdeflate=1.22=hb9d3cd8_0 + - libdrm=2.4.123=hb9d3cd8_0 + - libedit=3.1.20191231=he28a2e2_2 + - libegl=1.7.0=ha4b6fd6_2 + - libexpat=2.6.4=h5888daf_0 + - libffi=3.4.2=h7f98852_5 + - libgcc=14.2.0=h77fa898_1 + - libgcc-ng=14.2.0=h69a702a_1 + - libgfortran=14.2.0=h69a702a_1 + - libgfortran5=14.2.0=hd5240d6_1 + - libgl=1.7.0=ha4b6fd6_2 + - libglib=2.82.2=h2ff4ddf_0 + - libglvnd=1.7.0=ha4b6fd6_2 + - libglx=1.7.0=ha4b6fd6_2 + - libgomp=14.2.0=h77fa898_1 + - libiconv=1.17=hd590300_2 + - libjpeg-turbo=3.0.0=hd590300_1 + - liblapack=3.9.0=25_linux64_openblas + - libllvm19=19.1.4=ha7bfdaf_1 + - libnsl=2.0.1=hd590300_0 + - libntlm=1.4=h7f98852_1002 + - libopenblas=0.3.28=pthreads_h94d23a6_1 + - libopengl=1.7.0=ha4b6fd6_2 + - libpciaccess=0.18=hd590300_0 + - libpng=1.6.44=hadc24fc_0 + - libpq=17.2=h04577a9_0 + - libsodium=1.0.20=h4ab18f5_0 + - libsqlite=3.47.0=hadc24fc_1 + - libstdcxx=14.2.0=hc0a3c3a_1 + - libstdcxx-ng=14.2.0=h4852527_1 + - libtiff=4.7.0=he137b08_1 + - libuuid=2.38.1=h0b41bf4_0 + - libwebp-base=1.4.0=hd590300_0 + - libxcb=1.17.0=h8a09558_0 + - libxcrypt=4.4.36=hd590300_1 + - libxgboost=2.1.2=cuda118_h09a87be_2 + - libxkbcommon=1.7.0=h2c5496b_1 + - libxml2=2.13.5=hb346dea_0 + - libxslt=1.1.39=h76b75d6_0 + - libzlib=1.3.1=hb9d3cd8_2 + - matplotlib=3.9.2=py310hff52083_2 + - matplotlib-base=3.9.2=py310h68603db_2 + - matplotlib-inline=0.1.7=pyhd8ed1ab_0 + - munkres=1.1.4=pyh9f0ad1d_0 + - mysql-common=9.0.1=h266115a_2 + - mysql-libs=9.0.1=he0572af_2 + - nbformat=5.10.4=pyhd8ed1ab_0 + - nccl=2.23.4.1=h03a54cd_3 + - ncurses=6.5=he02047a_1 + - nest-asyncio=1.6.0=pyhd8ed1ab_0 + - openjpeg=2.5.2=h488ebb8_0 + - openldap=2.6.9=he970967_0 + - openpyxl=3.1.5=py310h0999ad4_1 + - openssl=3.4.0=hb9d3cd8_0 + - packaging=24.2=pyhff2d567_1 + - pandas=2.2.3=py310h5eaa309_1 + - parso=0.8.4=pyhd8ed1ab_0 + - patsy=1.0.1=pyhff2d567_0 + - pcre2=10.44=hba22ea6_2 + - pexpect=4.9.0=pyhd8ed1ab_0 + - pickleshare=0.7.5=py_1003 + - pillow=11.0.0=py310hfeaa1f3_0 + - pip=24.3.1=pyh8b19718_0 + - pixman=0.43.2=h59595ed_0 + - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_1 + - platformdirs=4.3.6=pyhd8ed1ab_0 + - plotly=5.24.1=pyhd8ed1ab_0 + - prompt-toolkit=3.0.48=pyha770c72_0 + - psutil=6.1.0=py310ha75aee5_0 + - pthread-stubs=0.4=hb9d3cd8_1002 + - ptyprocess=0.7.0=pyhd3deb0d_0 + - pure_eval=0.2.3=pyhd8ed1ab_0 + - py-xgboost=2.1.2=cuda118_pyh40095f8_2 + - py-xgboost-gpu=2.1.2=pyh256f914_2 + - pygments=2.18.0=pyhd8ed1ab_0 + - pyparsing=3.2.0=pyhd8ed1ab_1 + - pyside6=6.8.0.2=py310hfd10a26_0 + - python=3.10.15=h4a871b0_2_cpython + - python-dateutil=2.9.0.post0=pyhff2d567_0 + - python-fastjsonschema=2.21.0=pyhd8ed1ab_0 + - python-tzdata=2024.2=pyhd8ed1ab_0 + - python_abi=3.10=5_cp310 + - pyzmq=26.2.0=py310h71f11fc_3 + - qhull=2020.2=h434a139_5 + - qt6-main=6.8.0=h6e8976b_0 + - readline=8.2=h8228510_1 + - referencing=0.35.1=pyhd8ed1ab_0 + - rpds-py=0.21.0=py310h505e2c1_0 + - scikit-learn=1.5.2=py310h27f47ee_1 + - scipy=1.14.1=py310hfcf56fc_1 + - seaborn=0.13.2=hd8ed1ab_2 + - seaborn-base=0.13.2=pyhd8ed1ab_2 + - setuptools=75.6.0=pyhff2d567_1 + - six=1.16.0=pyh6c4a22f_0 + - statsmodels=0.14.4=py310hf462985_0 + - tenacity=9.0.0=pyhd8ed1ab_0 + - threadpoolctl=3.5.0=pyhc1e730c_0 + - tk=8.6.13=noxft_h4845f30_101 + - tornado=6.4.2=py310ha75aee5_0 + - traitlets=5.14.3=pyhd8ed1ab_0 + - typing_extensions=4.12.2=pyha770c72_0 + - tzdata=2024b=hc8b5060_0 + - unicodedata2=15.1.0=py310ha75aee5_1 + - wayland=1.23.1=h3e06ad9_0 + - wcwidth=0.2.13=pyhd8ed1ab_0 + - wheel=0.45.1=pyhd8ed1ab_0 + - xcb-util=0.4.1=hb711507_2 + - xcb-util-cursor=0.1.5=hb9d3cd8_0 + - xcb-util-image=0.4.0=hb711507_2 + - xcb-util-keysyms=0.4.1=hb711507_0 + - xcb-util-renderutil=0.3.10=hb711507_0 + - xcb-util-wm=0.4.2=hb711507_0 + - xgboost=2.1.2=cuda118_pyh256f914_2 + - xkeyboard-config=2.43=hb9d3cd8_0 + - xlrd=2.0.1=pyhd8ed1ab_3 + - xorg-libice=1.1.1=hb9d3cd8_1 + - xorg-libsm=1.2.4=he73a12e_1 + - xorg-libx11=1.8.10=h4f16b4b_0 + - xorg-libxau=1.0.11=hb9d3cd8_1 + - xorg-libxcomposite=0.4.6=hb9d3cd8_2 + - xorg-libxcursor=1.2.3=hb9d3cd8_0 + - xorg-libxdamage=1.1.6=hb9d3cd8_0 + - xorg-libxdmcp=1.1.5=hb9d3cd8_0 + - xorg-libxext=1.3.6=hb9d3cd8_0 + - xorg-libxfixes=6.0.1=hb9d3cd8_0 + - xorg-libxi=1.8.2=hb9d3cd8_0 + - xorg-libxrandr=1.5.4=hb9d3cd8_0 + - xorg-libxrender=0.9.11=hb9d3cd8_1 + - xorg-libxtst=1.2.5=hb9d3cd8_3 + - xorg-libxxf86vm=1.1.5=hb9d3cd8_4 + - xorg-xorgproto=2024.1=hb9d3cd8_1 + - xz=5.2.6=h166bdaf_0 + - zeromq=4.3.5=h3b0a872_7 + - zipp=3.21.0=pyhd8ed1ab_0 + - zlib=1.3.1=hb9d3cd8_2 + - zstd=1.5.6=ha6fb4c9_0 + - pip: + - absl-py==2.1.0 + - astunparse==1.6.3 + - charset-normalizer==3.4.0 + - flatbuffers==24.3.25 + - gast==0.6.0 + - google-pasta==0.2.0 + - grpcio==1.68.0 + - h5py==3.12.1 + - idna==3.10 + - imageio==2.36.1 + - keras==3.7.0 + - lazy-loader==0.4 + - libclang==18.1.1 + - markdown==3.7 + - markdown-it-py==3.0.0 + - markupsafe==3.0.2 + - mdurl==0.1.2 + - ml-dtypes==0.4.1 + - namex==0.0.8 + - networkx==3.4.2 + - numpy==2.0.2 + - nvidia-cublas-cu12==12.6.4.1 + - nvidia-cuda-cupti-cu12==12.6.80 + - nvidia-cuda-nvcc-cu12==12.6.85 + - nvidia-cuda-nvrtc-cu12==12.6.85 + - nvidia-cuda-runtime-cu12==12.6.77 + - nvidia-cudnn-cu12==9.5.1.17 + - nvidia-cufft-cu12==11.3.0.4 + - nvidia-curand-cu12==10.3.7.77 + - nvidia-cusolver-cu12==11.7.1.2 + - nvidia-cusparse-cu12==12.5.4.2 + - nvidia-nccl-cu12==2.23.4 + - nvidia-nvjitlink-cu12==12.6.85 + - opt-einsum==3.4.0 + - optree==0.13.1 + - pip-review==1.3.0 + - protobuf==5.29.0 + - pytz==2024.2 + - requests==2.32.3 + - rich==13.9.4 + - scikit-image==0.24.0 + - stack-data==0.6.3 + - tensorboard==2.18.0 + - tensorboard-data-server==0.7.2 + - tensorflow==2.18.0 + - tensorflow-io-gcs-filesystem==0.37.1 + - termcolor==2.5.0 + - tifffile==2024.9.20 + - urllib3==2.2.3 + - werkzeug==3.1.3 + - wrapt==1.17.0 +prefix: /home/ubuntu/miniconda3/envs/MLEAsm