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# Templating for Clinical Trials Eligibility Criteria





  
  

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Scripts, data, and clusters used in the process of templating clinical trials eligibility data in order to provide more structure.





  
  

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## Scripts





  
  

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Most scripts used for clustering and automatic templating are stored in /scripts/.





  
  

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## Raw Data





  
  

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Raw data for both the sample set and full cancer set are stored in /Formatted Data/.





  
  

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## Clusters





  
  

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### Sample set





  
  

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Clusters are stored at /clusters/final340numclusters2/.





  
  

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### Full cancer set





  
  

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Clusters are stored at /clusters/final9knumclusters/, ordered clusters at /clusters/ordered9kclusters, clusters of cluster centers at clusters/center9kclusters/, and megaclusters at /clusters/mega9kclust/.





  
  

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### Other clusters





  
  

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Other intermediate clusters and clustering schemes used along the way are also stored in /clusters/, but final clustering schemes are noted above.





  
  

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## Templates





  
  

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Some templates for the full cancer set generated by the program are stored at /templates/templates/ and /templates/fillins/.  Thresholds for the templates shown are noted in /templates/thresholds.  All booleanized templates for the sample set are stored at /templates/booleanizedtemplates/.





  
  

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## Parser





  
  

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Code for the parser is stored at /templates/parser/.