17 lines (16 with data), 1.0 kB
##fileformat=VCFv4.2
##FILTER=<ID=PASS,Description="All filters passed">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth of all passing filters reads.">
##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Read depth of all passing filters reads for each allele.">
##FORMAT=<ID=GL,Number=G,Type=Float,Description="Genotype likelihoods, log10 encoded">
##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Genotype likelihoods, Phred encoded">
##FORMAT=<ID=PS,Number=1,Type=Integer,Description="Phase set for GT">
##contig=<ID=Chr1,length=50>
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Fido Spot
Chr1 21 DogSNP1 A T 0 . . GT:GQ 0/1:. 0/1:42
Chr1 22 DogSNP2 A T 0 . . GT:PL 0/1:. 0|1:50,40,60
Chr1 23 DogSNP3 A T 0 . . GT:GL:PS 0/1:.:. 0/1:-5.0,-4.0,-6.0:.
Chr1 24 DogSNP4 A T 0 . . GT:PL:PS 0|1:50,40,60:24 0|1:50,40,60:.
Chr1 25 DogSNP5 A T 0 . . GT:GQ:PS:PL 0|1:42:24:50,40,60 1|1:42:.:50,40,60