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#ifndef THIRD_PARTY_NUCLEUS_IO_TEXT_READER_H_
#define THIRD_PARTY_NUCLEUS_IO_TEXT_READER_H_
#include <memory>
#include <string>
#include "absl/memory/memory.h"
#include "htslib/hts.h"
#include "third_party/nucleus/platform/types.h"
#include "third_party/nucleus/core/statusor.h"
#include "third_party/nucleus/core/status.h"
namespace nucleus {
// The TextReader class allows reading text from a (possibly compressed) file.
class TextReader {
public:
// Factory method to construct a TextReader.
// File compression is determined from file magic (contents), not filename.
static StatusOr<std::unique_ptr<TextReader>> FromFile(const string& path);
// Destructor; closes the file, if it's still open.
~TextReader();
// Reads a single line from the file.
// Returns:
// - the string line (excluding trailing newline) if read is successful;
// - a status of ::nucleus::OutOfRange if at end-of-file;
// - otherwise, an appropriate error Status.
StatusOr<string> ReadLine();
// Explicitly closes the underlying file stream.
::nucleus::Status Close();
private:
// Private constructor.
TextReader(htsFile* hts_file);
// Underlying htslib file stream.
htsFile* hts_file_;
};
} // namespace nucleus
#endif // THIRD_PARTY_NUCLEUS_IO_TEXT_READER_H_