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Catherine Stones
cathy-stones/
deepvariant-r1.6.1
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[9b26b7]: / deepvariant / testdata / input / make_examples_runtime-00000-of-00002.tsv

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# region get reads find candidates make pileup images write outputs num reads num candidates num examples
1 chr1:1-1000 0.025 0.016 0.0 0.0 0 0 0
2 chr1:64001-65000 0.032 0.044 0.027 0.001 25 1 1
3 chr1:128001-129000 0.059 0.047 0.081 0.01 59 2 2
4 chr1:192001-193000 0.058 0.045 0.261 0.078 56 13 13
5 chr1:256001-257000 0.033 0.014 0.0 0.0 0 0 0
6 chr1:320001-321000 0.037 0.016 0.0 0.0 0 0 0
7 chr1:384001-385000 0.02 0.031 0.0 0.0 0 0 0
8 chr1:448001-449000 0.019 0.03 0.0 0.0 0 0 0
9 chr1:512001-513000 0.034 0.041 0.036 0.017 40 3 3
10 chr1:576001-577000 0.008 0.013 0.0 0.0 0 0 0
11 chr1:640001-641000 0.022 0.043 0.025 0.005 24 1 1
12 chr1:704001-705000 0.039 0.045 0.037 0.016 41 3 3
13 chr1:768001-769000 0.049 0.046 0.054 0.011 42 2 2
14 chr1:832001-833000 0.034 0.04 0.066 0.016 37 3 3
15 chr1:896001-897000 0.032 0.046 0.134 0.059 35 9 11
16 chr1:960001-961000 0.021 0.047 0.079 0.021 19 5 5
17 chr1:1024001-1025000 0.024 0.042 0.035 0.004 26 1 1
18 chr1:1088001-1089000 0.022 0.046 0.082 0.021 25 4 4
19 chr1:1152001-1153000 0.02 0.043 0.035 0.01 25 2 2
20 chr1:1216001-1217000 0.021 0.044 0.001 0.001 21 0 0
21 chr1:1280001-1281000 0.012 0.051 0.0 0.0 20 0 0
22 chr1:1344001-1345000 0.022 0.047 0.007 0.006 22 1 1
23 chr1:1408001-1409000 0.048 0.05 0.0 0.0 42 0 0
24 chr1:1472001-1473000 0.03 0.041 0.0 0.0 38 0 0
25 chr1:1536001-1537000 0.021 0.038 0.0 0.0 29 0 0
26 chr1:1600001-1601000 0.014 0.052 0.078 0.023 16 5 5
27 chr1:1664001-1665000 0.033 0.04 0.149 0.044 32 9 9
28 chr1:1728001-1729000 0.021 0.041 0.064 0.034 29 7 7
29 chr1:1792001-1793000 0.027 0.048 0.022 0.009 34 2 2
30 chr1:1856001-1857000 0.019 0.046 0.108 0.02 31 4 4
31 chr1:1920001-1921000 0.026 0.05 0.012 0.011 14 2 2
32 chr1:1984001-1985000 0.01 0.038 0.0 0.0 19 0 0
33 chr1:2048001-2049000 0.018 0.046 0.055 0.009 22 2 2
34 chr1:2112001-2113000 0.02 0.04 0.058 0.019 31 4 4
35 chr1:2176001-2177000 0.028 0.043 0.0 0.0 22 0 0
36 chr1:2240001-2241000 0.024 0.041 0.0 0.0 32 0 0
37 chr1:2304001-2305000 0.016 0.042 0.009 0.005 26 1 1
38 chr1:2368001-2369000 0.021 0.042 0.052 0.025 34 5 5
39 chr1:2432001-2433000 0.02 0.046 0.077 0.021 21 4 4
40 chr1:2496001-2497000 0.017 0.043 0.007 0.006 25 1 1
41 chr1:2560001-2561000 0.027 0.053 0.059 0.01 25 2 2
42 chr1:2624001-2625000 0.021 0.041 0.024 0.011 35 2 2
43 chr1:2688001-2689000 0.103 0.127 6.844 1.052 82 126 136
44 chr1:2752001-2753000 0.069 0.1 2.525 1.118 17 231 261
45 chr1:2816001-2817000 0.043 0.042 0.0 0.0 33 0 0
46 chr1:2880001-2881000 0.017 0.041 0.045 0.014 26 3 3
47 chr1:2944001-2945000 0.037 0.04 0.048 0.013 30 3 3
48 chr1:3008001-3009000 0.07 0.042 0.0 0.0 32 0 0
49 chr1:3072001-3073000 0.024 0.047 0.014 0.009 20 2 2
50 chr1:3136001-3137000 0.022 0.043 0.019 0.005 16 1 1
51 chr1:3200001-3201000 0.013 0.045 0.065 0.021 22 3 5
52 chr1:3264001-3265000 0.025 0.048 0.0 0.001 18 0 0
53 chr1:3328001-3329000 0.02 0.044 0.0 0.0 35 0 0
54 chr1:3392001-3393000 0.029 0.041 0.0 0.0 24 0 0
55 chr1:3456001-3457000 0.021 0.047 0.028 0.009 20 2 2
56 chr1:3520001-3521000 0.018 0.046 0.0 0.0 20 0 0
57 chr1:3584001-3585000 0.013 0.043 0.026 0.012 13 3 3
58 chr1:3648001-3649000 0.038 0.039 0.0 0.0 32 0 0
59 chr1:3712001-3713000 0.02 0.042 0.022 0.014 19 3 3
60 chr1:3776001-3777000 0.026 0.045 0.056 0.013 22 3 3
61 chr1:3840001-3841000 0.032 0.044 0.021 0.01 37 2 2
62 chr1:3904001-3905000 0.056 0.044 0.025 0.013 28 3 3
63 chr1:3968001-3969000 0.025 0.04 0.047 0.024 32 5 5
64 chr1:4032001-4033000 0.021 0.045 0.189 0.065 34 12 14
65 chr1:4096001-4097000 0.023 0.043 0.037 0.01 30 2 2
66 chr1:4160001-4161000 0.024 0.045 0.013 0.009 19 2 2
67 chr1:4224001-4225000 0.024 0.041 0.096 0.021 36 3 5
68 chr1:4288001-4289000 0.048 0.038 0.0 0.0 45 0 0
69 chr1:4352001-4353000 0.018 0.042 0.073 0.02 24 4 4
70 chr1:4416001-4417000 0.053 0.041 0.101 0.023 40 3 5
71 chr1:4480001-4481000 0.023 0.041 0.012 0.005 41 1 1
72 chr1:4544001-4545000 0.029 0.041 0.169 0.029 38 6 6
73 chr1:4608001-4609000 0.029 0.04 0.033 0.005 32 1 1
74 chr1:4672001-4673000 0.022 0.041 0.01 0.005 37 1 1
75 chr1:4736001-4737000 0.019 0.049 0.024 0.014 31 3 3
76 chr1:4800001-4801000 0.039 0.037 0.0 0.0 31 0 0
77 chr1:4864001-4865000 0.024 0.042 0.031 0.005 35 1 1
78 chr1:4928001-4929000 0.036 0.042 0.014 0.005 52 1 1
79 chr1:4992001-4993000 0.029 0.042 0.0 0.0 48 0 0
80 chr1:5056001-5057000 0.026 0.039 0.0 0.0 46 0 0
81 chr1:5120001-5121000 0.017 0.04 0.134 0.044 26 5 10
82 chr1:5184001-5185000 0.043 0.04 0.01 0.004 34 1 1
83 chr1:5248001-5249000 0.019 0.042 0.041 0.009 27 2 2
84 chr1:5312001-5313000 0.023 0.043 0.01 0.005 34 1 1
85 chr1:5376001-5377000 0.015 0.045 0.0 0.0 27 0 0
86 chr1:5440001-5441000 0.028 0.041 0.01 0.006 31 1 1
87 chr1:5504001-5505000 0.034 0.038 0.125 0.021 41 2 4
88 chr1:5568001-5569000 0.031 0.041 0.0 0.0 45 0 0
89 chr1:5632001-5633000 0.033 0.039 0.034 0.006 37 1 1
90 chr1:5696001-5697000 0.023 0.038 0.049 0.01 36 2 2
91 chr1:5760001-5761000 0.039 0.037 0.0 0.0 31 0 0
92 chr1:5824001-5825000 0.023 0.04 0.101 0.029 36 4 6
93 chr1:5888001-5889000 0.028 0.044 0.039 0.021 15 5 5
94 chr1:5952001-5953000 0.026 0.04 0.047 0.01 36 2 2
95 chr1:6016001-6017000 0.019 0.042 0.01 0.005 33 1 1
96 chr1:6080001-6081000 0.024 0.046 0.011 0.014 33 1 1
97 chr1:6144001-6145000 0.015 0.042 0.054 0.018 27 4 4
98 chr1:6208001-6209000 0.033 0.044 0.084 0.029 36 6 6
99 chr1:6272001-6273000 0.059 0.042 0.007 0.006 26 1 1
100 chr1:6336001-6337000 0.031 0.04 0.062 0.009 31 2 2