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"""Tests that call_variants can run in a environment with an accelerator."""
from absl.testing import absltest
from absl.testing import parameterized
import tensorflow as tf
from deepvariant import call_variants_slim
from deepvariant import modeling
from deepvariant import testdata
from third_party.nucleus.testing import test_utils
def setUpModule():
testdata.init()
class CallVariantsAcceleratorTests(
tf.test.TestCase, metaclass=parameterized.TestGeneratorMetaclass
):
@parameterized.parameters(modeling.production_models())
def test_call_variants_runs_on_gpus(self, model):
call_variants_slim.call_variants(
examples_filename=testdata.GOLDEN_CALLING_EXAMPLES,
checkpoint_path=None,
model=model,
execution_hardware='accelerator',
output_file=test_utils.test_tmpfile('zzz.tfrecord'),
)
if __name__ == '__main__':
absltest.main()