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| a | b/scripts/pre-process/Leuk_pre-process.ipynb | ||
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| 1 | { |
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| 2 | "cells": [ |
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| 3 | { |
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| 4 | "cell_type": "markdown", |
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| 5 | "id": "1dfc91ae", |
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| 6 | "metadata": {}, |
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| 7 | "source": [ |
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| 8 | "# CLAHE applied" |
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| 9 | ] |
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| 10 | }, |
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| 11 | { |
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| 12 | "cell_type": "code", |
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| 13 | "execution_count": 18, |
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| 14 | "id": "e6aaca56", |
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| 15 | "metadata": {}, |
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| 16 | "outputs": [ |
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| 17 | { |
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| 18 | "name": "stdout", |
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| 19 | "output_type": "stream", |
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| 20 | "text": [ |
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| 21 | "Min max balues: 165 4 uint8\n", |
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| 22 | "Min max balues: 160 4 uint8\n", |
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| 23 | "Min max balues: 164 4 uint8\n", |
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| 24 | "Min max balues: 166 4 uint8\n", |
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| 25 | "Min max balues: 175 6 uint8\n", |
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| 26 | "Min max balues: 167 6 uint8\n", |
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| 27 | "Min max balues: 170 6 uint8\n", |
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| 28 | "Min max balues: 169 6 uint8\n", |
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| 29 | "Min max balues: 189 4 uint8\n", |
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| 30 | "Min max balues: 158 4 uint8\n", |
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| 31 | "Min max balues: 171 4 uint8\n", |
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| 32 | "Min max balues: 173 4 uint8\n", |
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| 33 | "Min max balues: 176 4 uint8\n", |
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| 34 | "Min max balues: 155 6 uint8\n", |
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| 35 | "Min max balues: 201 4 uint8\n", |
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| 36 | "Min max balues: 158 4 uint8\n", |
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| 37 | "Min max balues: 178 6 uint8\n", |
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| 38 | "Min max balues: 186 4 uint8\n", |
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| 39 | "Min max balues: 165 4 uint8\n", |
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| 40 | "Min max balues: 188 6 uint8\n", |
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| 41 | "Min max balues: 168 6 uint8\n", |
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| 42 | "Min max balues: 179 4 uint8\n", |
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| 43 | "Min max balues: 160 4 uint8\n", |
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| 44 | "Min max balues: 165 4 uint8\n", |
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| 45 | "Min max balues: 162 4 uint8\n", |
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| 46 | "Min max balues: 192 4 uint8\n", |
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| 47 | "Min max balues: 189 5 uint8\n", |
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| 48 | "Min max balues: 166 6 uint8\n", |
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| 49 | "Min max balues: 185 4 uint8\n", |
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| 50 | "Min max balues: 167 4 uint8\n", |
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| 51 | "Min max balues: 152 4 uint8\n", |
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| 52 | "Min max balues: 153 4 uint8\n", |
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| 53 | "Min max balues: 193 4 uint8\n", |
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| 54 | "Min max balues: 167 4 uint8\n", |
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| 55 | "Min max balues: 158 4 uint8\n", |
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| 56 | "Min max balues: 157 4 uint8\n", |
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| 57 | "Min max balues: 193 4 uint8\n", |
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| 58 | "Min max balues: 170 4 uint8\n", |
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| 59 | "Min max balues: 184 4 uint8\n", |
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| 60 | "Min max balues: 194 4 uint8\n", |
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| 61 | "Min max balues: 195 4 uint8\n", |
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| 62 | "Min max balues: 162 4 uint8\n", |
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| 63 | "Min max balues: 166 4 uint8\n", |
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| 64 | "Min max balues: 169 4 uint8\n", |
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| 65 | "Min max balues: 159 4 uint8\n", |
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| 66 | "Min max balues: 181 4 uint8\n", |
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| 67 | "Min max balues: 183 4 uint8\n", |
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| 68 | "Min max balues: 171 4 uint8\n", |
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| 69 | "Min max balues: 179 6 uint8\n", |
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| 70 | "Min max balues: 172 4 uint8\n", |
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| 71 | "Min max balues: 161 4 uint8\n", |
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| 72 | "Min max balues: 178 4 uint8\n", |
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| 73 | "Min max balues: 179 6 uint8\n", |
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| 74 | "Min max balues: 181 4 uint8\n", |
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| 75 | "Min max balues: 168 4 uint8\n", |
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| 76 | "Min max balues: 170 4 uint8\n", |
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| 77 | "Min max balues: 226 4 uint8\n", |
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| 78 | "Min max balues: 165 4 uint8\n", |
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| 79 | "Min max balues: 206 4 uint8\n", |
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| 80 | "Min max balues: 159 4 uint8\n", |
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| 81 | "Min max balues: 175 6 uint8\n", |
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| 82 | "Min max balues: 185 4 uint8\n", |
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| 83 | "Min max balues: 189 4 uint8\n", |
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| 84 | "Min max balues: 194 4 uint8\n", |
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| 85 | "Min max balues: 177 4 uint8\n", |
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| 86 | "Min max balues: 205 4 uint8\n", |
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| 87 | "Min max balues: 159 6 uint8\n", |
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| 88 | "Min max balues: 165 4 uint8\n", |
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| 89 | "Min max balues: 167 4 uint8\n", |
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| 90 | "Min max balues: 213 4 uint8\n", |
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| 91 | "Min max balues: 193 4 uint8\n", |
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| 92 | "Min max balues: 170 4 uint8\n", |
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| 93 | "Min max balues: 175 4 uint8\n", |
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| 94 | "Min max balues: 183 4 uint8\n", |
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| 95 | "Min max balues: 179 4 uint8\n", |
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| 96 | "Min max balues: 162 4 uint8\n", |
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| 97 | "Min max balues: 173 4 uint8\n", |
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| 98 | "Min max balues: 186 4 uint8\n", |
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| 99 | "Min max balues: 182 3 uint8\n", |
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| 100 | "Min max balues: 213 4 uint8\n", |
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| 101 | "Min max balues: 185 4 uint8\n", |
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| 102 | "Min max balues: 210 4 uint8\n", |
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| 103 | "Min max balues: 172 6 uint8\n", |
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| 104 | "Min max balues: 151 4 uint8\n", |
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| 105 | "Min max balues: 165 6 uint8\n", |
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| 106 | "Min max balues: 158 6 uint8\n", |
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| 107 | "Min max balues: 172 6 uint8\n", |
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| 108 | "Min max balues: 167 4 uint8\n", |
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| 109 | "Min max balues: 187 4 uint8\n", |
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| 110 | "Min max balues: 204 4 uint8\n", |
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| 111 | "Min max balues: 169 4 uint8\n", |
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| 112 | "Min max balues: 162 4 uint8\n", |
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| 113 | "Min max balues: 183 4 uint8\n", |
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| 114 | "Min max balues: 187 4 uint8\n", |
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| 115 | "Min max balues: 181 4 uint8\n", |
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| 116 | "Min max balues: 168 4 uint8\n", |
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| 117 | "Min max balues: 170 4 uint8\n", |
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| 118 | "Min max balues: 155 4 uint8\n", |
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| 119 | "Min max balues: 155 4 uint8\n", |
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| 120 | "Min max balues: 176 4 uint8\n", |
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| 121 | "Min max balues: 248 4 uint8\n", |
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| 122 | "Min max balues: 183 4 uint8\n", |
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| 123 | "Min max balues: 190 6 uint8\n", |
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| 124 | "Min max balues: 166 4 uint8\n", |
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| 125 | "Min max balues: 209 4 uint8\n", |
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| 126 | "Min max balues: 174 4 uint8\n", |
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| 127 | "Min max balues: 174 4 uint8\n", |
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| 128 | "Min max balues: 174 4 uint8\n", |
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| 129 | "Min max balues: 175 6 uint8\n", |
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| 130 | "Min max balues: 187 4 uint8\n", |
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| 131 | "Min max balues: 186 4 uint8\n", |
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| 132 | "Min max balues: 171 4 uint8\n", |
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| 133 | "Min max balues: 166 4 uint8\n", |
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| 134 | "Min max balues: 171 6 uint8\n", |
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| 135 | "Min max balues: 163 4 uint8\n", |
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| 136 | "Min max balues: 158 4 uint8\n", |
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| 137 | "Min max balues: 167 4 uint8\n", |
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| 138 | "Min max balues: 169 6 uint8\n", |
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| 139 | "Min max balues: 170 4 uint8\n", |
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| 140 | "Min max balues: 186 4 uint8\n", |
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| 141 | "Min max balues: 177 6 uint8\n", |
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| 142 | "Min max balues: 174 4 uint8\n", |
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| 143 | "Min max balues: 163 4 uint8\n", |
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| 144 | "Min max balues: 184 4 uint8\n", |
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| 145 | "Min max balues: 173 4 uint8\n", |
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| 146 | "Min max balues: 183 4 uint8\n", |
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| 147 | "Min max balues: 156 4 uint8\n", |
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| 148 | "Min max balues: 193 4 uint8\n", |
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| 149 | "Min max balues: 181 4 uint8\n", |
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| 150 | "Min max balues: 160 4 uint8\n", |
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| 151 | "Min max balues: 177 4 uint8\n", |
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| 152 | "Min max balues: 215 4 uint8\n", |
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| 153 | "Min max balues: 179 4 uint8\n", |
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| 154 | "Min max balues: 180 4 uint8\n", |
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| 155 | "Min max balues: 180 4 uint8\n", |
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| 156 | "Min max balues: 181 4 uint8\n", |
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| 157 | "Min max balues: 184 4 uint8\n", |
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| 158 | "Min max balues: 170 4 uint8\n", |
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| 159 | "Min max balues: 224 6 uint8\n", |
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| 160 | "Min max balues: 181 4 uint8\n", |
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| 161 | "Min max balues: 158 4 uint8\n", |
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| 162 | "Min max balues: 158 4 uint8\n", |
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| 163 | "Min max balues: 175 4 uint8\n", |
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| 164 | "Min max balues: 172 4 uint8\n", |
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| 165 | "Min max balues: 168 6 uint8\n", |
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| 166 | "Min max balues: 178 4 uint8\n", |
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| 167 | "Min max balues: 166 4 uint8\n", |
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| 168 | "Min max balues: 177 6 uint8\n", |
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| 169 | "Min max balues: 165 4 uint8\n", |
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| 170 | "Min max balues: 183 4 uint8\n", |
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| 171 | "Min max balues: 172 4 uint8\n", |
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| 172 | "Min max balues: 184 4 uint8\n", |
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| 173 | "Min max balues: 181 4 uint8\n", |
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| 174 | "Min max balues: 182 4 uint8\n", |
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| 175 | "Min max balues: 169 4 uint8\n", |
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| 176 | "Min max balues: 181 4 uint8\n", |
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| 177 | "Min max balues: 192 4 uint8\n", |
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| 178 | "Min max balues: 184 4 uint8\n", |
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| 179 | "Min max balues: 161 4 uint8\n", |
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| 180 | "Min max balues: 161 4 uint8\n", |
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| 181 | "Min max balues: 201 4 uint8\n", |
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| 182 | "Min max balues: 171 4 uint8\n", |
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| 183 | "Min max balues: 164 4 uint8\n", |
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| 184 | "Min max balues: 165 4 uint8\n", |
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| 185 | "Min max balues: 169 4 uint8\n", |
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| 186 | "Min max balues: 177 3 uint8\n", |
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| 187 | "Min max balues: 167 4 uint8\n", |
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| 188 | "Min max balues: 155 4 uint8\n", |
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| 189 | "Min max balues: 162 4 uint8\n", |
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| 190 | "Min max balues: 181 4 uint8\n", |
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| 191 | "Min max balues: 171 4 uint8\n", |
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| 192 | "Min max balues: 163 6 uint8\n", |
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| 193 | "Min max balues: 175 4 uint8\n", |
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| 194 | "Min max balues: 186 6 uint8\n", |
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| 195 | "Min max balues: 185 4 uint8\n", |
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| 196 | "Min max balues: 181 4 uint8\n", |
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| 197 | "Min max balues: 174 4 uint8\n", |
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| 198 | "Min max balues: 176 6 uint8\n", |
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| 199 | "Min max balues: 172 4 uint8\n", |
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| 200 | "Min max balues: 166 4 uint8\n", |
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| 201 | "Min max balues: 149 4 uint8\n", |
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| 202 | "Min max balues: 174 4 uint8\n", |
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| 203 | "Min max balues: 180 4 uint8\n", |
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| 204 | "Min max balues: 176 4 uint8\n", |
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| 205 | "Min max balues: 163 4 uint8\n", |
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| 206 | "Min max balues: 201 3 uint8\n", |
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| 207 | "Min max balues: 168 6 uint8\n", |
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| 208 | "Min max balues: 176 4 uint8\n", |
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| 209 | "Min max balues: 170 4 uint8\n", |
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| 210 | "Min max balues: 171 4 uint8\n", |
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| 211 | "Min max balues: 168 4 uint8\n", |
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| 212 | "Min max balues: 165 4 uint8\n", |
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| 213 | "Min max balues: 186 6 uint8\n", |
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| 214 | "Min max balues: 169 4 uint8\n", |
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| 215 | "Min max balues: 180 4 uint8\n", |
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| 216 | "Min max balues: 183 4 uint8\n", |
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| 217 | "Min max balues: 160 6 uint8\n", |
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| 218 | "Min max balues: 168 4 uint8\n", |
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| 219 | "Min max balues: 179 4 uint8\n", |
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| 220 | "Min max balues: 156 4 uint8\n", |
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| 221 | "Min max balues: 181 4 uint8\n", |
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| 222 | "Min max balues: 165 6 uint8\n", |
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| 223 | "Min max balues: 180 4 uint8\n", |
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| 224 | "Min max balues: 166 4 uint8\n", |
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| 225 | "Min max balues: 173 6 uint8\n", |
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| 226 | "Min max balues: 173 3 uint8\n", |
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| 227 | "Min max balues: 161 4 uint8\n", |
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| 228 | "Min max balues: 177 4 uint8\n", |
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| 229 | "Min max balues: 190 4 uint8\n", |
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| 230 | "Min max balues: 175 4 uint8\n", |
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| 231 | "Min max balues: 170 4 uint8\n", |
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| 232 | "Min max balues: 194 6 uint8\n", |
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| 233 | "Min max balues: 182 4 uint8\n", |
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| 234 | "Min max balues: 180 4 uint8\n", |
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| 235 | "Min max balues: 177 6 uint8\n", |
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| 236 | "Min max balues: 183 6 uint8\n", |
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| 237 | "Min max balues: 153 4 uint8\n", |
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| 238 | "Min max balues: 172 3 uint8\n", |
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| 239 | "Min max balues: 195 6 uint8\n", |
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| 240 | "Min max balues: 172 4 uint8\n", |
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| 241 | "Min max balues: 174 6 uint8\n", |
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| 242 | "Min max balues: 170 4 uint8\n", |
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| 243 | "Min max balues: 190 4 uint8\n", |
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| 244 | "Min max balues: 153 4 uint8\n", |
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| 245 | "Min max balues: 176 6 uint8\n", |
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| 246 | "Min max balues: 183 4 uint8\n", |
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| 247 | "Min max balues: 177 6 uint8\n", |
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| 248 | "Min max balues: 164 4 uint8\n", |
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| 249 | "Min max balues: 175 4 uint8\n", |
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| 250 | "Min max balues: 176 6 uint8\n", |
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| 251 | "Min max balues: 147 4 uint8\n", |
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| 252 | "Min max balues: 178 4 uint8\n", |
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| 253 | "Min max balues: 212 4 uint8\n", |
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| 254 | "Min max balues: 164 6 uint8\n", |
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| 255 | "Min max balues: 198 6 uint8\n", |
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| 256 | "Min max balues: 172 6 uint8\n", |
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| 257 | "Min max balues: 156 4 uint8\n", |
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| 258 | "Min max balues: 164 4 uint8\n", |
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| 259 | "Min max balues: 168 4 uint8\n", |
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| 260 | "Min max balues: 158 6 uint8\n", |
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| 261 | "Min max balues: 181 4 uint8\n", |
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| 262 | "Min max balues: 172 4 uint8\n", |
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| 263 | "Min max balues: 185 4 uint8\n", |
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| 264 | "Min max balues: 180 4 uint8\n", |
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| 265 | "Min max balues: 207 4 uint8\n", |
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| 266 | "Min max balues: 161 4 uint8\n", |
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| 267 | "Min max balues: 161 4 uint8\n", |
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| 268 | "Min max balues: 166 4 uint8\n", |
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| 269 | "Min max balues: 156 4 uint8\n", |
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| 270 | "Min max balues: 167 3 uint8\n", |
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| 271 | "Min max balues: 175 4 uint8\n", |
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| 272 | "Min max balues: 181 4 uint8\n", |
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| 273 | "Min max balues: 168 6 uint8\n", |
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| 274 | "Min max balues: 153 3 uint8\n", |
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| 275 | "Min max balues: 168 6 uint8\n", |
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| 276 | "Min max balues: 172 4 uint8\n", |
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| 277 | "Min max balues: 162 4 uint8\n", |
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| 278 | "Min max balues: 204 4 uint8\n", |
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| 279 | "Min max balues: 170 4 uint8\n", |
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| 280 | "Min max balues: 175 6 uint8\n", |
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| 281 | "Min max balues: 177 6 uint8\n", |
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| 282 | "Min max balues: 202 3 uint8\n", |
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| 283 | "Min max balues: 178 6 uint8\n", |
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| 284 | "Min max balues: 174 6 uint8\n", |
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| 285 | "Min max balues: 163 4 uint8\n", |
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| 286 | "Min max balues: 190 4 uint8\n", |
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| 287 | "Min max balues: 167 4 uint8\n", |
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| 288 | "Min max balues: 180 4 uint8\n", |
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| 289 | "Min max balues: 177 4 uint8\n", |
||
| 290 | "Min max balues: 176 4 uint8\n", |
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| 291 | "Min max balues: 176 4 uint8\n", |
||
| 292 | "Min max balues: 160 6 uint8\n", |
||
| 293 | "Min max balues: 183 4 uint8\n", |
||
| 294 | "Min max balues: 161 4 uint8\n", |
||
| 295 | "Min max balues: 192 4 uint8\n", |
||
| 296 | "Min max balues: 166 4 uint8\n", |
||
| 297 | "Min max balues: 185 5 uint8\n", |
||
| 298 | "Min max balues: 180 4 uint8\n", |
||
| 299 | "Min max balues: 158 4 uint8\n", |
||
| 300 | "Min max balues: 182 6 uint8\n", |
||
| 301 | "Min max balues: 174 4 uint8\n", |
||
| 302 | "Min max balues: 172 4 uint8\n", |
||
| 303 | "Min max balues: 166 4 uint8\n", |
||
| 304 | "Min max balues: 162 4 uint8\n", |
||
| 305 | "Min max balues: 177 4 uint8\n", |
||
| 306 | "Min max balues: 173 4 uint8\n", |
||
| 307 | "Min max balues: 177 4 uint8\n", |
||
| 308 | "Min max balues: 178 6 uint8\n", |
||
| 309 | "Min max balues: 166 6 uint8\n", |
||
| 310 | "Min max balues: 168 4 uint8\n", |
||
| 311 | "Min max balues: 147 4 uint8\n" |
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| 312 | ] |
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| 313 | }, |
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| 314 | { |
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| 315 | "name": "stdout", |
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| 316 | "output_type": "stream", |
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| 317 | "text": [ |
||
| 318 | "Min max balues: 160 4 uint8\n", |
||
| 319 | "Min max balues: 172 6 uint8\n", |
||
| 320 | "Min max balues: 161 4 uint8\n", |
||
| 321 | "Min max balues: 174 4 uint8\n", |
||
| 322 | "Min max balues: 184 6 uint8\n", |
||
| 323 | "Min max balues: 180 4 uint8\n", |
||
| 324 | "Min max balues: 168 6 uint8\n", |
||
| 325 | "Min max balues: 177 4 uint8\n", |
||
| 326 | "Min max balues: 191 4 uint8\n", |
||
| 327 | "Min max balues: 166 4 uint8\n", |
||
| 328 | "Min max balues: 164 6 uint8\n", |
||
| 329 | "Min max balues: 182 4 uint8\n", |
||
| 330 | "Min max balues: 176 4 uint8\n", |
||
| 331 | "Min max balues: 159 4 uint8\n", |
||
| 332 | "Min max balues: 173 4 uint8\n", |
||
| 333 | "Min max balues: 164 4 uint8\n", |
||
| 334 | "Min max balues: 158 4 uint8\n", |
||
| 335 | "Min max balues: 158 4 uint8\n", |
||
| 336 | "Min max balues: 167 4 uint8\n", |
||
| 337 | "Min max balues: 158 4 uint8\n", |
||
| 338 | "Min max balues: 169 4 uint8\n", |
||
| 339 | "Min max balues: 171 3 uint8\n", |
||
| 340 | "Min max balues: 190 4 uint8\n", |
||
| 341 | "Min max balues: 192 1 uint8\n", |
||
| 342 | "Min max balues: 184 4 uint8\n", |
||
| 343 | "Min max balues: 181 4 uint8\n", |
||
| 344 | "Min max balues: 155 4 uint8\n", |
||
| 345 | "Min max balues: 174 4 uint8\n", |
||
| 346 | "Min max balues: 177 4 uint8\n", |
||
| 347 | "Min max balues: 163 4 uint8\n", |
||
| 348 | "Min max balues: 157 4 uint8\n", |
||
| 349 | "Min max balues: 186 3 uint8\n", |
||
| 350 | "Min max balues: 161 4 uint8\n", |
||
| 351 | "Min max balues: 195 4 uint8\n", |
||
| 352 | "Min max balues: 170 4 uint8\n", |
||
| 353 | "Min max balues: 156 4 uint8\n", |
||
| 354 | "Min max balues: 179 4 uint8\n", |
||
| 355 | "Min max balues: 178 4 uint8\n", |
||
| 356 | "Min max balues: 186 4 uint8\n", |
||
| 357 | "Min max balues: 163 6 uint8\n", |
||
| 358 | "Min max balues: 173 4 uint8\n", |
||
| 359 | "Min max balues: 158 6 uint8\n", |
||
| 360 | "Min max balues: 172 6 uint8\n", |
||
| 361 | "Min max balues: 171 4 uint8\n", |
||
| 362 | "Min max balues: 169 4 uint8\n", |
||
| 363 | "Min max balues: 175 4 uint8\n", |
||
| 364 | "Min max balues: 173 4 uint8\n", |
||
| 365 | "Min max balues: 202 4 uint8\n", |
||
| 366 | "Min max balues: 194 6 uint8\n", |
||
| 367 | "Min max balues: 166 6 uint8\n", |
||
| 368 | "Min max balues: 161 4 uint8\n", |
||
| 369 | "Min max balues: 206 3 uint8\n", |
||
| 370 | "Min max balues: 169 4 uint8\n", |
||
| 371 | "Min max balues: 163 4 uint8\n", |
||
| 372 | "Min max balues: 181 4 uint8\n", |
||
| 373 | "Min max balues: 196 4 uint8\n", |
||
| 374 | "Min max balues: 171 4 uint8\n", |
||
| 375 | "Min max balues: 188 4 uint8\n", |
||
| 376 | "Min max balues: 167 6 uint8\n", |
||
| 377 | "Min max balues: 179 4 uint8\n", |
||
| 378 | "Min max balues: 163 6 uint8\n", |
||
| 379 | "Min max balues: 180 4 uint8\n", |
||
| 380 | "Min max balues: 177 4 uint8\n", |
||
| 381 | "Min max balues: 165 4 uint8\n", |
||
| 382 | "Min max balues: 188 4 uint8\n", |
||
| 383 | "Min max balues: 172 4 uint8\n", |
||
| 384 | "Min max balues: 175 4 uint8\n", |
||
| 385 | "Min max balues: 164 4 uint8\n", |
||
| 386 | "Min max balues: 183 6 uint8\n", |
||
| 387 | "Min max balues: 151 4 uint8\n", |
||
| 388 | "Min max balues: 179 6 uint8\n", |
||
| 389 | "Min max balues: 192 3 uint8\n", |
||
| 390 | "Min max balues: 198 4 uint8\n", |
||
| 391 | "Min max balues: 180 4 uint8\n", |
||
| 392 | "Min max balues: 170 6 uint8\n", |
||
| 393 | "Min max balues: 177 6 uint8\n", |
||
| 394 | "Min max balues: 168 6 uint8\n", |
||
| 395 | "Min max balues: 183 4 uint8\n", |
||
| 396 | "Min max balues: 160 6 uint8\n", |
||
| 397 | "Min max balues: 171 4 uint8\n", |
||
| 398 | "Min max balues: 195 4 uint8\n", |
||
| 399 | "Min max balues: 172 4 uint8\n", |
||
| 400 | "Min max balues: 183 4 uint8\n", |
||
| 401 | "Min max balues: 183 4 uint8\n", |
||
| 402 | "Min max balues: 174 4 uint8\n", |
||
| 403 | "Min max balues: 178 4 uint8\n", |
||
| 404 | "Min max balues: 187 4 uint8\n", |
||
| 405 | "Min max balues: 182 6 uint8\n", |
||
| 406 | "Min max balues: 173 4 uint8\n", |
||
| 407 | "Min max balues: 177 6 uint8\n", |
||
| 408 | "Min max balues: 176 4 uint8\n", |
||
| 409 | "Min max balues: 219 3 uint8\n", |
||
| 410 | "Min max balues: 178 4 uint8\n", |
||
| 411 | "Min max balues: 167 4 uint8\n", |
||
| 412 | "Min max balues: 196 4 uint8\n", |
||
| 413 | "Min max balues: 161 4 uint8\n", |
||
| 414 | "Min max balues: 193 6 uint8\n", |
||
| 415 | "Min max balues: 174 4 uint8\n", |
||
| 416 | "Min max balues: 175 6 uint8\n", |
||
| 417 | "Min max balues: 178 4 uint8\n", |
||
| 418 | "Min max balues: 165 4 uint8\n", |
||
| 419 | "Min max balues: 158 4 uint8\n", |
||
| 420 | "Min max balues: 177 6 uint8\n", |
||
| 421 | "Min max balues: 170 4 uint8\n", |
||
| 422 | "Min max balues: 231 4 uint8\n", |
||
| 423 | "Min max balues: 176 4 uint8\n", |
||
| 424 | "Min max balues: 182 4 uint8\n", |
||
| 425 | "Min max balues: 172 4 uint8\n", |
||
| 426 | "Min max balues: 173 6 uint8\n", |
||
| 427 | "Min max balues: 177 4 uint8\n", |
||
| 428 | "Min max balues: 167 6 uint8\n", |
||
| 429 | "Min max balues: 194 4 uint8\n", |
||
| 430 | "Min max balues: 174 6 uint8\n", |
||
| 431 | "Min max balues: 163 6 uint8\n", |
||
| 432 | "Min max balues: 184 4 uint8\n", |
||
| 433 | "Min max balues: 157 4 uint8\n", |
||
| 434 | "Min max balues: 170 4 uint8\n", |
||
| 435 | "Min max balues: 176 4 uint8\n", |
||
| 436 | "Min max balues: 168 4 uint8\n", |
||
| 437 | "Min max balues: 168 4 uint8\n", |
||
| 438 | "Min max balues: 163 3 uint8\n", |
||
| 439 | "Min max balues: 179 4 uint8\n", |
||
| 440 | "Min max balues: 169 6 uint8\n", |
||
| 441 | "Min max balues: 176 4 uint8\n", |
||
| 442 | "Min max balues: 207 4 uint8\n", |
||
| 443 | "Min max balues: 187 4 uint8\n", |
||
| 444 | "Min max balues: 173 4 uint8\n", |
||
| 445 | "Min max balues: 161 6 uint8\n", |
||
| 446 | "Min max balues: 168 4 uint8\n", |
||
| 447 | "Min max balues: 175 4 uint8\n", |
||
| 448 | "Min max balues: 161 4 uint8\n", |
||
| 449 | "Min max balues: 177 4 uint8\n", |
||
| 450 | "Min max balues: 165 6 uint8\n", |
||
| 451 | "Min max balues: 185 6 uint8\n", |
||
| 452 | "Min max balues: 168 4 uint8\n", |
||
| 453 | "Min max balues: 174 4 uint8\n", |
||
| 454 | "Min max balues: 170 4 uint8\n", |
||
| 455 | "Min max balues: 194 6 uint8\n", |
||
| 456 | "Min max balues: 162 4 uint8\n", |
||
| 457 | "Min max balues: 191 4 uint8\n", |
||
| 458 | "Min max balues: 210 4 uint8\n", |
||
| 459 | "Min max balues: 151 6 uint8\n", |
||
| 460 | "Min max balues: 208 4 uint8\n", |
||
| 461 | "Min max balues: 181 4 uint8\n", |
||
| 462 | "Min max balues: 158 4 uint8\n", |
||
| 463 | "Min max balues: 178 4 uint8\n", |
||
| 464 | "Min max balues: 176 3 uint8\n", |
||
| 465 | "Min max balues: 173 4 uint8\n", |
||
| 466 | "Min max balues: 168 4 uint8\n", |
||
| 467 | "Min max balues: 180 4 uint8\n", |
||
| 468 | "Min max balues: 161 4 uint8\n", |
||
| 469 | "Min max balues: 200 6 uint8\n", |
||
| 470 | "Min max balues: 174 6 uint8\n", |
||
| 471 | "Min max balues: 170 6 uint8\n", |
||
| 472 | "Min max balues: 170 4 uint8\n", |
||
| 473 | "Min max balues: 186 4 uint8\n", |
||
| 474 | "Min max balues: 184 6 uint8\n", |
||
| 475 | "Min max balues: 173 6 uint8\n", |
||
| 476 | "Min max balues: 189 4 uint8\n", |
||
| 477 | "Min max balues: 197 4 uint8\n", |
||
| 478 | "Min max balues: 151 4 uint8\n", |
||
| 479 | "Min max balues: 178 4 uint8\n", |
||
| 480 | "Min max balues: 164 4 uint8\n", |
||
| 481 | "Min max balues: 176 6 uint8\n", |
||
| 482 | "Min max balues: 180 4 uint8\n", |
||
| 483 | "Min max balues: 174 4 uint8\n", |
||
| 484 | "Min max balues: 188 4 uint8\n", |
||
| 485 | "Min max balues: 176 4 uint8\n", |
||
| 486 | "Min max balues: 156 4 uint8\n", |
||
| 487 | "Min max balues: 187 4 uint8\n", |
||
| 488 | "Min max balues: 155 4 uint8\n", |
||
| 489 | "Min max balues: 169 4 uint8\n", |
||
| 490 | "Min max balues: 177 4 uint8\n", |
||
| 491 | "Min max balues: 172 4 uint8\n", |
||
| 492 | "Min max balues: 198 4 uint8\n", |
||
| 493 | "Min max balues: 170 4 uint8\n", |
||
| 494 | "Min max balues: 163 4 uint8\n", |
||
| 495 | "Min max balues: 195 6 uint8\n", |
||
| 496 | "Min max balues: 166 4 uint8\n", |
||
| 497 | "Min max balues: 155 4 uint8\n", |
||
| 498 | "Min max balues: 179 4 uint8\n", |
||
| 499 | "Min max balues: 174 4 uint8\n", |
||
| 500 | "Min max balues: 180 4 uint8\n", |
||
| 501 | "Min max balues: 180 4 uint8\n", |
||
| 502 | "Min max balues: 147 4 uint8\n", |
||
| 503 | "Min max balues: 172 6 uint8\n", |
||
| 504 | "Min max balues: 224 1 uint8\n", |
||
| 505 | "Min max balues: 208 4 uint8\n", |
||
| 506 | "Min max balues: 167 6 uint8\n", |
||
| 507 | "Min max balues: 202 2 uint8\n", |
||
| 508 | "Min max balues: 181 4 uint8\n", |
||
| 509 | "Min max balues: 161 4 uint8\n", |
||
| 510 | "Min max balues: 177 6 uint8\n", |
||
| 511 | "Min max balues: 153 4 uint8\n", |
||
| 512 | "Min max balues: 175 6 uint8\n", |
||
| 513 | "Min max balues: 230 6 uint8\n", |
||
| 514 | "Min max balues: 158 6 uint8\n", |
||
| 515 | "Min max balues: 161 4 uint8\n", |
||
| 516 | "Min max balues: 221 4 uint8\n", |
||
| 517 | "Min max balues: 166 4 uint8\n", |
||
| 518 | "Min max balues: 175 4 uint8\n", |
||
| 519 | "Min max balues: 188 4 uint8\n", |
||
| 520 | "Min max balues: 179 6 uint8\n", |
||
| 521 | "Min max balues: 159 6 uint8\n", |
||
| 522 | "Min max balues: 186 4 uint8\n", |
||
| 523 | "Min max balues: 162 6 uint8\n", |
||
| 524 | "Min max balues: 159 4 uint8\n", |
||
| 525 | "Min max balues: 203 4 uint8\n", |
||
| 526 | "Min max balues: 169 4 uint8\n", |
||
| 527 | "Min max balues: 166 4 uint8\n", |
||
| 528 | "Min max balues: 179 4 uint8\n", |
||
| 529 | "Min max balues: 163 4 uint8\n", |
||
| 530 | "Min max balues: 178 4 uint8\n", |
||
| 531 | "Min max balues: 173 4 uint8\n", |
||
| 532 | "Min max balues: 161 4 uint8\n", |
||
| 533 | "Min max balues: 186 4 uint8\n", |
||
| 534 | "Min max balues: 194 4 uint8\n", |
||
| 535 | "Min max balues: 187 6 uint8\n", |
||
| 536 | "Min max balues: 157 4 uint8\n", |
||
| 537 | "Min max balues: 181 3 uint8\n", |
||
| 538 | "Min max balues: 181 4 uint8\n", |
||
| 539 | "Min max balues: 178 4 uint8\n", |
||
| 540 | "Min max balues: 177 4 uint8\n", |
||
| 541 | "Min max balues: 180 4 uint8\n", |
||
| 542 | "Min max balues: 193 4 uint8\n", |
||
| 543 | "Min max balues: 160 6 uint8\n", |
||
| 544 | "Min max balues: 167 4 uint8\n", |
||
| 545 | "Min max balues: 174 6 uint8\n", |
||
| 546 | "Min max balues: 179 4 uint8\n", |
||
| 547 | "Min max balues: 172 4 uint8\n", |
||
| 548 | "Min max balues: 178 4 uint8\n", |
||
| 549 | "Min max balues: 166 4 uint8\n", |
||
| 550 | "Min max balues: 185 4 uint8\n", |
||
| 551 | "Min max balues: 167 6 uint8\n", |
||
| 552 | "Min max balues: 185 4 uint8\n", |
||
| 553 | "Min max balues: 166 4 uint8\n", |
||
| 554 | "Min max balues: 181 4 uint8\n", |
||
| 555 | "Min max balues: 187 4 uint8\n", |
||
| 556 | "Min max balues: 162 4 uint8\n", |
||
| 557 | "Min max balues: 164 4 uint8\n", |
||
| 558 | "Min max balues: 180 3 uint8\n", |
||
| 559 | "Min max balues: 171 4 uint8\n", |
||
| 560 | "Min max balues: 165 6 uint8\n", |
||
| 561 | "Min max balues: 199 4 uint8\n", |
||
| 562 | "Min max balues: 164 4 uint8\n", |
||
| 563 | "Min max balues: 185 4 uint8\n", |
||
| 564 | "Min max balues: 168 4 uint8\n", |
||
| 565 | "Min max balues: 211 4 uint8\n", |
||
| 566 | "Min max balues: 165 6 uint8\n", |
||
| 567 | "Min max balues: 184 4 uint8\n", |
||
| 568 | "Min max balues: 168 4 uint8\n", |
||
| 569 | "Min max balues: 169 6 uint8\n", |
||
| 570 | "Min max balues: 181 4 uint8\n", |
||
| 571 | "Min max balues: 213 6 uint8\n", |
||
| 572 | "Min max balues: 180 6 uint8\n", |
||
| 573 | "Min max balues: 160 4 uint8\n", |
||
| 574 | "Min max balues: 158 4 uint8\n", |
||
| 575 | "Min max balues: 161 4 uint8\n", |
||
| 576 | "Min max balues: 169 4 uint8\n", |
||
| 577 | "Min max balues: 176 6 uint8\n", |
||
| 578 | "Min max balues: 148 4 uint8\n", |
||
| 579 | "Min max balues: 162 6 uint8\n", |
||
| 580 | "Min max balues: 158 4 uint8\n", |
||
| 581 | "Min max balues: 219 3 uint8\n", |
||
| 582 | "Min max balues: 177 4 uint8\n", |
||
| 583 | "Min max balues: 175 4 uint8\n", |
||
| 584 | "Min max balues: 172 6 uint8\n", |
||
| 585 | "Min max balues: 170 4 uint8\n", |
||
| 586 | "Min max balues: 161 4 uint8\n", |
||
| 587 | "Min max balues: 150 4 uint8\n", |
||
| 588 | "Min max balues: 161 6 uint8\n", |
||
| 589 | "Min max balues: 166 4 uint8\n", |
||
| 590 | "Min max balues: 191 3 uint8\n", |
||
| 591 | "Min max balues: 166 4 uint8\n", |
||
| 592 | "Min max balues: 183 4 uint8\n", |
||
| 593 | "Min max balues: 169 4 uint8\n", |
||
| 594 | "Min max balues: 155 4 uint8\n", |
||
| 595 | "Min max balues: 167 4 uint8\n", |
||
| 596 | "Min max balues: 172 4 uint8\n", |
||
| 597 | "Min max balues: 171 4 uint8\n", |
||
| 598 | "Min max balues: 179 6 uint8\n", |
||
| 599 | "Min max balues: 189 4 uint8\n", |
||
| 600 | "Min max balues: 177 6 uint8\n", |
||
| 601 | "Min max balues: 163 4 uint8\n", |
||
| 602 | "Min max balues: 147 6 uint8\n", |
||
| 603 | "Min max balues: 166 4 uint8\n", |
||
| 604 | "Min max balues: 204 4 uint8\n", |
||
| 605 | "Min max balues: 183 6 uint8\n", |
||
| 606 | "Min max balues: 172 4 uint8\n" |
||
| 607 | ] |
||
| 608 | }, |
||
| 609 | { |
||
| 610 | "name": "stdout", |
||
| 611 | "output_type": "stream", |
||
| 612 | "text": [ |
||
| 613 | "Min max balues: 176 4 uint8\n", |
||
| 614 | "Min max balues: 180 4 uint8\n", |
||
| 615 | "Min max balues: 169 6 uint8\n", |
||
| 616 | "Min max balues: 167 6 uint8\n", |
||
| 617 | "Min max balues: 171 6 uint8\n", |
||
| 618 | "Min max balues: 171 4 uint8\n", |
||
| 619 | "Min max balues: 185 4 uint8\n", |
||
| 620 | "Min max balues: 175 6 uint8\n", |
||
| 621 | "Min max balues: 182 4 uint8\n", |
||
| 622 | "Min max balues: 177 4 uint8\n", |
||
| 623 | "Min max balues: 166 4 uint8\n", |
||
| 624 | "Min max balues: 170 4 uint8\n", |
||
| 625 | "Min max balues: 149 6 uint8\n", |
||
| 626 | "Min max balues: 189 4 uint8\n", |
||
| 627 | "Min max balues: 189 6 uint8\n", |
||
| 628 | "Min max balues: 171 6 uint8\n", |
||
| 629 | "Min max balues: 183 4 uint8\n", |
||
| 630 | "Min max balues: 189 4 uint8\n", |
||
| 631 | "Min max balues: 173 4 uint8\n", |
||
| 632 | "Min max balues: 174 3 uint8\n", |
||
| 633 | "Min max balues: 168 4 uint8\n", |
||
| 634 | "Min max balues: 162 4 uint8\n", |
||
| 635 | "Min max balues: 164 4 uint8\n", |
||
| 636 | "Min max balues: 164 4 uint8\n", |
||
| 637 | "Min max balues: 173 4 uint8\n", |
||
| 638 | "Min max balues: 172 4 uint8\n", |
||
| 639 | "Min max balues: 183 4 uint8\n", |
||
| 640 | "Min max balues: 194 3 uint8\n", |
||
| 641 | "Min max balues: 166 4 uint8\n", |
||
| 642 | "Min max balues: 179 4 uint8\n", |
||
| 643 | "Min max balues: 163 4 uint8\n", |
||
| 644 | "Min max balues: 164 6 uint8\n", |
||
| 645 | "Min max balues: 164 3 uint8\n", |
||
| 646 | "Min max balues: 157 4 uint8\n", |
||
| 647 | "Min max balues: 183 6 uint8\n", |
||
| 648 | "Min max balues: 168 4 uint8\n", |
||
| 649 | "Min max balues: 160 4 uint8\n", |
||
| 650 | "Min max balues: 170 4 uint8\n", |
||
| 651 | "Min max balues: 178 4 uint8\n", |
||
| 652 | "Min max balues: 205 4 uint8\n", |
||
| 653 | "Min max balues: 177 4 uint8\n", |
||
| 654 | "Min max balues: 165 4 uint8\n", |
||
| 655 | "Min max balues: 184 4 uint8\n", |
||
| 656 | "Min max balues: 175 6 uint8\n", |
||
| 657 | "Min max balues: 155 4 uint8\n", |
||
| 658 | "Min max balues: 170 4 uint8\n", |
||
| 659 | "Min max balues: 167 4 uint8\n", |
||
| 660 | "Min max balues: 180 4 uint8\n", |
||
| 661 | "Min max balues: 184 4 uint8\n", |
||
| 662 | "Min max balues: 165 4 uint8\n", |
||
| 663 | "Min max balues: 177 4 uint8\n", |
||
| 664 | "Min max balues: 190 6 uint8\n", |
||
| 665 | "Min max balues: 176 6 uint8\n", |
||
| 666 | "Min max balues: 169 6 uint8\n", |
||
| 667 | "Min max balues: 180 4 uint8\n", |
||
| 668 | "Min max balues: 163 6 uint8\n", |
||
| 669 | "Min max balues: 176 4 uint8\n", |
||
| 670 | "Min max balues: 174 4 uint8\n", |
||
| 671 | "Min max balues: 174 4 uint8\n", |
||
| 672 | "Min max balues: 160 6 uint8\n", |
||
| 673 | "Min max balues: 160 6 uint8\n", |
||
| 674 | "Min max balues: 159 6 uint8\n", |
||
| 675 | "Min max balues: 201 3 uint8\n", |
||
| 676 | "Min max balues: 171 4 uint8\n", |
||
| 677 | "Min max balues: 185 6 uint8\n", |
||
| 678 | "Min max balues: 159 4 uint8\n", |
||
| 679 | "Min max balues: 174 6 uint8\n", |
||
| 680 | "Min max balues: 183 6 uint8\n", |
||
| 681 | "Success\n" |
||
| 682 | ] |
||
| 683 | } |
||
| 684 | ], |
||
| 685 | "source": [ |
||
| 686 | "import numpy as np\n", |
||
| 687 | "import cv2\n", |
||
| 688 | "import os\n", |
||
| 689 | "import skimage\n", |
||
| 690 | "from skimage.io import imread, imshow\n", |
||
| 691 | "import json\n", |
||
| 692 | "from matplotlib import pyplot as plt\n", |
||
| 693 | "from PIL import Image, ImageEnhance\n", |
||
| 694 | "\n", |
||
| 695 | "import cv2\n", |
||
| 696 | "\n", |
||
| 697 | "def pre_processImg(img):\n", |
||
| 698 | " \n", |
||
| 699 | " #-----Reading the image-----------------------------------------------------\n", |
||
| 700 | " img = cv2.imread(r'E:\\Leuk study re-designed\\C-NMC\\Low imbalance\\Train - 1 to 10 ratio\\hem\\UID_H1_1_1_hem.bmp', 1)\n", |
||
| 701 | " img = cv2.cvtColor(img, cv2.COLOR_BGR2RGB)\n", |
||
| 702 | " #cv2.imshow(\"img\",img) \n", |
||
| 703 | "\n", |
||
| 704 | " #-----Converting image to LAB Color model----------------------------------- \n", |
||
| 705 | " lab= cv2.cvtColor(img, cv2.COLOR_BGR2LAB)\n", |
||
| 706 | " #cv2.imshow(\"lab\",lab)\n", |
||
| 707 | "\n", |
||
| 708 | " #-----Splitting the LAB image to different channels-------------------------\n", |
||
| 709 | " l, a, b = cv2.split(lab)\n", |
||
| 710 | " #cv2.imshow('l_channel', l)\n", |
||
| 711 | " #cv2.imshow('a_channel', a)\n", |
||
| 712 | " #cv2.imshow('b_channel', b)\n", |
||
| 713 | "\n", |
||
| 714 | " #-----Applying CLAHE to L-channel-------------------------------------------\n", |
||
| 715 | " clahe = cv2.createCLAHE(clipLimit=3.0, tileGridSize=(8,8))\n", |
||
| 716 | " cl = clahe.apply(l)\n", |
||
| 717 | " #cv2.imshow('CLAHE output', cl)\n", |
||
| 718 | "\n", |
||
| 719 | " #-----Merge the CLAHE enhanced L-channel with the a and b channel-----------\n", |
||
| 720 | " limg = cv2.merge((cl,a,b))\n", |
||
| 721 | " #cv2.imshow('limg', limg)\n", |
||
| 722 | "\n", |
||
| 723 | " #-----Converting image from LAB Color model to RGB model--------------------\n", |
||
| 724 | " final = cv2.cvtColor(limg, cv2.COLOR_LAB2BGR)\n", |
||
| 725 | " print('Min max balues: ', np.max(final), np.min(final), final.dtype)\n", |
||
| 726 | " im = Image.fromarray(final)\n", |
||
| 727 | " enhancer = ImageEnhance.Brightness(im)\n", |
||
| 728 | "\n", |
||
| 729 | " factor = 2.0 #gives original image\n", |
||
| 730 | " im_output = enhancer.enhance(factor)\n", |
||
| 731 | "\n", |
||
| 732 | " return im_output #PIL -Image returning\n", |
||
| 733 | "\n", |
||
| 734 | "\n", |
||
| 735 | "path_src = r'F:\\Leuk study re-designed\\C-NMC\\High imbalance\\Test\\hem'\n", |
||
| 736 | "path_tgt = r'F:\\Leuk study re-designed\\C-NMC\\High imbalance\\Test\\enhanched\\hem'\n", |
||
| 737 | "\n", |
||
| 738 | "all_list = os.listdir(path_src)\n", |
||
| 739 | "for x in range(len(all_list)):\n", |
||
| 740 | " img = cv2.imread(os.path.join(path_src, all_list[x]))\n", |
||
| 741 | " img = pre_processImg(img)\n", |
||
| 742 | " img.save(os.path.join(path_tgt, all_list[x]))\n", |
||
| 743 | "print('Success')" |
||
| 744 | ] |
||
| 745 | } |
||
| 746 | ], |
||
| 747 | "metadata": { |
||
| 748 | "kernelspec": { |
||
| 749 | "display_name": "leukemia", |
||
| 750 | "language": "python", |
||
| 751 | "name": "leukemia" |
||
| 752 | }, |
||
| 753 | "language_info": { |
||
| 754 | "codemirror_mode": { |
||
| 755 | "name": "ipython", |
||
| 756 | "version": 3 |
||
| 757 | }, |
||
| 758 | "file_extension": ".py", |
||
| 759 | "mimetype": "text/x-python", |
||
| 760 | "name": "python", |
||
| 761 | "nbconvert_exporter": "python", |
||
| 762 | "pygments_lexer": "ipython3", |
||
| 763 | "version": "3.8.3" |
||
| 764 | } |
||
| 765 | }, |
||
| 766 | "nbformat": 4, |
||
| 767 | "nbformat_minor": 5 |
||
| 768 | } |