hub aSHM sites in hg19
shortLabel aSHM_hg19
longLabel curated aSHM sites in hg19
useOneFile on
email rdmorin@sfu.ca

genome hg19

track aSHM_regions
shortLabel aSHM regions
longLabel curated aSHM sites
visibility full
priority 1
type bigBed
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/somatic_hypermutation_locations_GRCh37.bb?raw=true

track aSHM_CLL
shortLabel CLL aSHM mutations
longLabel mutations at aSHM sites in CLL genomes
visibility squish
priority 2
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_CLL.bb?raw=true

track aSHM_BL
shortLabel BL aSHM mutations
longLabel mutations at aSHM sites in BL genomes
visibility squish
priority 3
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_BL.bb?raw=true

track aSHM_DLBCL
shortLabel DLBCL aSHM mutations
longLabel mutations at aSHM sites in DLBCL genomes
visibility squish
priority 4
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_DLBCL.bb?raw=true

track aSHM_DLBCL_exomes
shortLabel DLBCL exomes
longLabel mutations at aSHM sites in DLBCL exomes
visibility squish
priority 5
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_DLBCL_exomes.bb?raw=true

track aSHM_DLBCL_schmitz
shortLabel Schmitz exomes
longLabel mutations at aSHM sites in Schmitz exomes
visibility squish
priority 6
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_DLBCL_exomes_schmitz.bb?raw=true

track aSHM_DLBCL_chapuy
shortLabel Chapuy exomes
longLabel mutations at aSHM sites in Chapuy exomes
visibility squish
priority 7
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_DLBCL_exomes_chapuy.bb?raw=true


track aSHM_DLBCL_reddy
shortLabel Reddy exomes
longLabel mutations at aSHM sites in Reddy exomes
visibility squish
priority 8
type bigBed 9
itemRgb on
bigDataUrl https://github.com/morinlab/LLMPP/blob/main/hubs/ashm/ashm_hg19_DLBCL_exomes_reddy.bb?raw=true